Atomistry » Potassium » PDB 8bt6-8cu2 » 8ctn
Atomistry »
  Potassium »
    PDB 8bt6-8cu2 »
      8ctn »

Potassium in PDB 8ctn: Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field)

Protein crystallography data

The structure of Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field), PDB code: 8ctn was solved by B.Lee, K.I.White, M.A.Socolich, M.A.Klureza, R.Henning, V.Srajer, R.Ranganathan, D.Hekstra, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 21.42 / 2.01
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 68.816, 68.816, 90.365, 90, 90, 90
R / Rfree (%) 15.3 / 19.8

Potassium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Potassium atom in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field) (pdb code 8ctn). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 12 binding sites of Potassium where determined in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field), PDB code: 8ctn:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Potassium binding site 1 out of 12 in 8ctn

Go back to Potassium Binding Sites List in 8ctn
Potassium binding site 1 out of 12 in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K207

b:12.4
occ:0.19
O A:TYR66 2.7 12.1 1.0
K A:K212 3.0 21.1 0.0
O A:GLY65 3.2 13.8 1.0
C A:TYR66 3.4 17.0 1.0
K A:K208 3.7 9.1 0.2
HA A:TYR66 3.7 14.4 1.0
HA3 A:GLY67 3.9 16.0 1.0
CA A:TYR66 4.1 12.0 1.0
N A:GLY67 4.3 14.5 1.0
C A:GLY65 4.3 16.5 1.0
CA A:GLY67 4.6 13.3 1.0
N A:TYR66 4.7 12.8 1.0
H A:GLY67 4.9 17.4 1.0

Potassium binding site 2 out of 12 in 8ctn

Go back to Potassium Binding Sites List in 8ctn
Potassium binding site 2 out of 12 in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K208

b:9.1
occ:0.23
O A:VAL64 2.8 12.6 1.0
O A:GLY65 2.9 13.8 1.0
K A:K209 3.0 12.7 0.2
C A:GLY65 3.5 16.5 1.0
HA3 A:GLY65 3.6 16.1 1.0
K A:K207 3.7 12.4 0.2
C A:VAL64 3.9 11.6 1.0
CA A:GLY65 4.0 13.4 1.0
HA A:TYR66 4.3 14.4 1.0
N A:GLY65 4.4 13.8 1.0
N A:TYR66 4.5 12.8 1.0
CA A:TYR66 4.8 12.0 1.0
HA2 A:GLY65 4.9 16.1 1.0

Potassium binding site 3 out of 12 in 8ctn

Go back to Potassium Binding Sites List in 8ctn
Potassium binding site 3 out of 12 in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K209

b:12.7
occ:0.25
O A:THR63 2.7 16.9 1.0
O A:VAL64 2.8 12.6 1.0
K A:K208 3.0 9.1 0.2
C A:VAL64 3.6 11.6 1.0
HA A:VAL64 3.6 13.8 1.0
K A:K210 3.7 14.8 0.2
C A:THR63 3.9 12.7 1.0
CA A:VAL64 4.0 11.5 1.0
HA3 A:GLY65 4.3 16.1 1.0
N A:VAL64 4.4 11.4 1.0
N A:GLY65 4.5 13.8 1.0
HB A:THR63 4.6 14.7 1.0
CA A:GLY65 4.8 13.4 1.0

Potassium binding site 4 out of 12 in 8ctn

Go back to Potassium Binding Sites List in 8ctn
Potassium binding site 4 out of 12 in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K210

b:14.8
occ:0.24
OG1 A:THR63 2.8 9.4 1.0
HB A:THR63 3.0 14.7 1.0
O A:THR63 3.1 16.9 1.0
CB A:THR63 3.4 12.2 1.0
K A:K209 3.7 12.7 0.2
C A:THR63 3.9 12.7 1.0
CA A:THR63 4.3 11.0 1.0
HG23 A:THR63 4.4 17.5 1.0
CG2 A:THR63 4.6 14.6 1.0
HA A:VAL64 4.7 13.8 1.0
HA A:THR63 4.8 13.2 1.0
N A:VAL64 4.9 11.4 1.0
O A:THR62 5.0 14.2 1.0

Potassium binding site 5 out of 12 in 8ctn

Go back to Potassium Binding Sites List in 8ctn
Potassium binding site 5 out of 12 in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K211

b:67.7
occ:0.25
HE2 A:PHE92 3.4 34.5 0.2
CE2 A:PHE92 4.1 28.7 0.2
HZ A:PHE92 4.4 25.9 0.2
CZ A:PHE92 4.6 21.6 0.2

Potassium binding site 6 out of 12 in 8ctn

Go back to Potassium Binding Sites List in 8ctn
Potassium binding site 6 out of 12 in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K212

b:21.1
occ:0.04
K A:K207 3.0 12.4 0.2
O A:TYR66 3.3 12.1 1.0
HA3 A:GLY67 3.8 16.0 1.0
C A:TYR66 4.4 17.0 1.0
CA A:GLY67 4.6 13.3 1.0
C A:GLY67 4.9 18.2 1.0
O A:GLY67 5.0 14.9 1.0

Potassium binding site 7 out of 12 in 8ctn

Go back to Potassium Binding Sites List in 8ctn
Potassium binding site 7 out of 12 in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 7 of Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K212

b:16.9
occ:0.24
O B:TYR66 2.6 15.7 1.0
O B:GLY65 3.1 15.2 1.0
C B:TYR66 3.4 21.5 1.0
K B:K217 3.7 44.0 0.1
K B:K213 3.7 15.2 0.2
HA B:TYR66 3.7 17.0 1.0
HA3 B:GLY67 3.9 25.2 1.0
CA B:TYR66 4.1 14.2 1.0
C B:GLY65 4.2 15.8 1.0
N B:GLY67 4.3 18.1 1.0
CA B:GLY67 4.6 21.0 1.0
N B:TYR66 4.7 12.0 1.0
H B:GLY67 4.9 21.8 1.0

Potassium binding site 8 out of 12 in 8ctn

Go back to Potassium Binding Sites List in 8ctn
Potassium binding site 8 out of 12 in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 8 of Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K213

b:15.2
occ:0.25
O B:GLY65 2.7 15.2 1.0
O B:VAL64 2.8 13.3 1.0
K B:K214 3.0 15.3 0.2
HA3 B:GLY65 3.3 22.5 1.0
C B:GLY65 3.4 15.8 1.0
K B:K212 3.7 16.9 0.2
CA B:GLY65 3.8 18.7 1.0
C B:VAL64 3.9 11.1 1.0
N B:GLY65 4.3 15.0 1.0
N B:TYR66 4.4 12.0 1.0
HA B:TYR66 4.4 17.0 1.0
HA2 B:GLY65 4.7 22.5 1.0
CA B:TYR66 4.8 14.2 1.0

Potassium binding site 9 out of 12 in 8ctn

Go back to Potassium Binding Sites List in 8ctn
Potassium binding site 9 out of 12 in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 9 of Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K214

b:15.3
occ:0.25
O B:THR63 2.7 16.3 1.0
O B:VAL64 2.7 13.3 1.0
K B:K213 3.0 15.2 0.2
C B:VAL64 3.5 11.1 1.0
HA B:VAL64 3.6 14.4 1.0
K B:K215 3.6 14.8 0.2
C B:THR63 3.9 12.6 1.0
CA B:VAL64 4.0 12.0 1.0
HA3 B:GLY65 4.1 22.5 1.0
N B:VAL64 4.4 13.6 1.0
N B:GLY65 4.4 15.0 1.0
HB B:THR63 4.6 13.7 1.0
CA B:GLY65 4.7 18.7 1.0

Potassium binding site 10 out of 12 in 8ctn

Go back to Potassium Binding Sites List in 8ctn
Potassium binding site 10 out of 12 in the Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 10 of Structure of A K+ Selective Nak Mutant (NAK2K, Laue Diffraction, No Electric Field) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K215

b:14.8
occ:0.25
OG1 B:THR63 2.8 12.1 1.0
O B:THR63 3.0 16.3 1.0
HB B:THR63 3.0 13.7 1.0
CB B:THR63 3.4 11.4 1.0
K B:K214 3.6 15.3 0.2
C B:THR63 3.9 12.6 1.0
CA B:THR63 4.3 10.8 1.0
HG21 B:THR63 4.5 21.4 1.0
CG2 B:THR63 4.6 17.8 1.0
HA B:VAL64 4.6 14.4 1.0
K B:K216 4.8 62.9 0.2
HA B:THR63 4.8 13.0 1.0
N B:VAL64 4.9 13.6 1.0
O B:THR62 5.0 17.3 1.0

Reference:

B.Lee, K.I.White, M.A.Socolich, M.A.Klureza, R.Henning, V.Srajer, R.Ranganathan, D.Hekstra. Direct Visualization of Electric Field-Stimulated Ion Conduction in A Potassium Channel To Be Published.
Page generated: Thu Jul 27 18:22:22 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy