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Potassium in PDB 7f0n: Structure of Deamidated Ubiquitin

Protein crystallography data

The structure of Structure of Deamidated Ubiquitin, PDB code: 7f0n was solved by K.Chauhan, N.Varshney, R.Das, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.24 / 1.60
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 48.01, 39.06, 35.29, 90, 93.12, 90
R / Rfree (%) 13.6 / 18.2

Other elements in 7f0n:

The structure of Structure of Deamidated Ubiquitin also contains other interesting chemical elements:

Sodium (Na) 10 atoms
Magnesium (Mg) 1 atom

Potassium Binding Sites:

The binding sites of Potassium atom in the Structure of Deamidated Ubiquitin (pdb code 7f0n). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Structure of Deamidated Ubiquitin, PDB code: 7f0n:

Potassium binding site 1 out of 1 in 7f0n

Go back to Potassium Binding Sites List in 7f0n
Potassium binding site 1 out of 1 in the Structure of Deamidated Ubiquitin


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of Deamidated Ubiquitin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K111

b:45.3
occ:1.00
O A:HOH302 2.5 40.4 1.0
OG1 A:THR66 2.6 9.4 1.0
O A:GLU64 2.7 14.2 1.0
O A:HOH252 3.2 34.5 1.0
N A:THR66 3.5 7.4 1.0
CB A:THR66 3.5 9.1 1.0
O A:HOH285 3.7 15.2 1.0
C A:SER65 3.9 8.8 1.0
C A:GLU64 3.9 10.9 1.0
CA A:THR66 4.1 7.8 1.0
CD2 A:PHE4 4.2 16.4 1.0
O A:HOH274 4.3 25.3 1.0
CA A:SER65 4.3 9.2 1.0
O A:SER65 4.4 9.0 1.0
N A:SER65 4.5 8.9 1.0
CE2 A:PHE4 4.8 16.8 1.0
CG2 A:THR66 4.8 9.8 1.0

Reference:

R.Rashmi, P.Mohanty, R.Aravind, K.Chauhan, N.Varshney, R.Das. Structure of Deamidated Ubiquitin To Be Published.
Page generated: Sat Aug 9 13:09:35 2025

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