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Potassium in PDB 5guf: Structural Insight Into An Intramembrane Enzyme For Archaeal Membrane Lipids Biosynthesis

Enzymatic activity of Structural Insight Into An Intramembrane Enzyme For Archaeal Membrane Lipids Biosynthesis

All present enzymatic activity of Structural Insight Into An Intramembrane Enzyme For Archaeal Membrane Lipids Biosynthesis:
2.7.7.67;

Protein crystallography data

The structure of Structural Insight Into An Intramembrane Enzyme For Archaeal Membrane Lipids Biosynthesis, PDB code: 5guf was solved by W.Cheng, S.Ren, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.63 / 2.40
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 56.505, 89.249, 98.876, 90.00, 90.00, 90.00
R / Rfree (%) 20.7 / 24.9

Other elements in 5guf:

The structure of Structural Insight Into An Intramembrane Enzyme For Archaeal Membrane Lipids Biosynthesis also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Structural Insight Into An Intramembrane Enzyme For Archaeal Membrane Lipids Biosynthesis (pdb code 5guf). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Structural Insight Into An Intramembrane Enzyme For Archaeal Membrane Lipids Biosynthesis, PDB code: 5guf:

Potassium binding site 1 out of 1 in 5guf

Go back to Potassium Binding Sites List in 5guf
Potassium binding site 1 out of 1 in the Structural Insight Into An Intramembrane Enzyme For Archaeal Membrane Lipids Biosynthesis


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structural Insight Into An Intramembrane Enzyme For Archaeal Membrane Lipids Biosynthesis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K205

b:64.4
occ:1.00
 O A:HOH306 2.6 53.0 1.0
OD1 A:ASP100 2.7 48.1 1.0
O2A A:CTP201 2.8 57.5 1.0
O A:HOH302 2.9 50.3 1.0
O A:HOH308 3.0 44.1 1.0
O A:ASP122 3.3 40.6 1.0
O A:HOH327 3.8 54.0 1.0
OD2 A:ASP125 3.8 47.6 1.0
O1A A:CTP201 3.9 42.8 1.0
PA A:CTP201 3.9 51.6 1.0
CG A:ASP100 3.9 43.9 1.0
O A:HOH325 4.1 54.4 1.0
C A:ASP122 4.2 43.5 1.0
CA A:ASP122 4.2 40.3 1.0
OD1 A:ASP125 4.2 45.7 1.0
NZ A:LYS57 4.4 55.5 1.0
O3G A:CTP201 4.4 46.7 1.0
O A:HOH316 4.4 46.7 1.0
CG A:ASP125 4.5 45.5 1.0
O A:HOH320 4.5 51.4 1.0
MG A:MG202 4.5 55.2 1.0
OD1 A:ASP122 4.5 43.2 1.0
CB A:ASP122 4.5 37.7 1.0
OD2 A:ASP100 4.6 57.1 1.0
CG A:ASP122 4.8 49.0 1.0
OD1 A:ASN28 4.8 36.9 1.0
CB A:ASP100 4.9 32.5 1.0
O5' A:CTP201 5.0 60.3 1.0

Reference:

S.Ren, A.Caforio, Q.Yang, B.Sun, F.Yu, X.Zhu, J.Wang, C.Dou, Q.Fu, N.Huang, Q.Sun, C.Nie, S.Qi, X.Gong, J.He, Y.Wei, A.J.Driessen, W.Cheng. Structural and Mechanistic Insights Into the Biosynthesis of Cdp-Archaeol in Membranes. Cell Res. V. 27 1378 2017.
ISSN: ISSN 1748-7838
PubMed: 28961231
DOI: 10.1038/CR.2017.122
Page generated: Mon Aug 12 13:47:53 2024

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