Potassium in PDB 6nv8: Perdeuterated Tyrosine Phenol-Lyase From Citrobacter Freundii Complexed with An Aminoacrylate Intermediate Formed From S-Ethyl-L- Cysteine and 4-Hydroxypyridine

Enzymatic activity of Perdeuterated Tyrosine Phenol-Lyase From Citrobacter Freundii Complexed with An Aminoacrylate Intermediate Formed From S-Ethyl-L- Cysteine and 4-Hydroxypyridine

All present enzymatic activity of Perdeuterated Tyrosine Phenol-Lyase From Citrobacter Freundii Complexed with An Aminoacrylate Intermediate Formed From S-Ethyl-L- Cysteine and 4-Hydroxypyridine:
4.1.99.2;

Protein crystallography data

The structure of Perdeuterated Tyrosine Phenol-Lyase From Citrobacter Freundii Complexed with An Aminoacrylate Intermediate Formed From S-Ethyl-L- Cysteine and 4-Hydroxypyridine, PDB code: 6nv8 was solved by R.S.Phillips, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.45 / 2.26
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 59.350, 143.110, 133.350, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 21.6

Potassium Binding Sites:

The binding sites of Potassium atom in the Perdeuterated Tyrosine Phenol-Lyase From Citrobacter Freundii Complexed with An Aminoacrylate Intermediate Formed From S-Ethyl-L- Cysteine and 4-Hydroxypyridine (pdb code 6nv8). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Perdeuterated Tyrosine Phenol-Lyase From Citrobacter Freundii Complexed with An Aminoacrylate Intermediate Formed From S-Ethyl-L- Cysteine and 4-Hydroxypyridine, PDB code: 6nv8:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 6nv8

Go back to Potassium Binding Sites List in 6nv8
Potassium binding site 1 out of 2 in the Perdeuterated Tyrosine Phenol-Lyase From Citrobacter Freundii Complexed with An Aminoacrylate Intermediate Formed From S-Ethyl-L- Cysteine and 4-Hydroxypyridine


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Perdeuterated Tyrosine Phenol-Lyase From Citrobacter Freundii Complexed with An Aminoacrylate Intermediate Formed From S-Ethyl-L- Cysteine and 4-Hydroxypyridine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1001

b:63.5
occ:1.00
 O A:GLY52 2.8 57.8 1.0
OE1 B:GLU69 2.8 62.8 1.0
O A:HOH1154 2.9 58.0 1.0
O B:HOH1632 2.9 55.0 1.0
O A:ASN262 3.1 50.6 1.0
O A:HOH1173 3.3 68.9 1.0
O B:GLU69 3.3 69.3 1.0
CB B:GLU69 3.6 53.9 1.0
C A:GLY52 3.6 45.8 1.0
CA B:GLU69 3.8 62.1 1.0
CB A:ASN262 3.8 48.4 1.0
CD B:GLU69 3.9 69.3 1.0
C B:GLU69 3.9 66.3 1.0
C A:ASN262 4.0 52.1 1.0
CA A:GLY52 4.0 56.3 1.0
CA A:ASN262 4.2 50.4 1.0
O B:HOH1660 4.2 52.5 1.0
CG B:GLU69 4.3 50.0 1.0
CA B:ALA295 4.3 57.1 1.0
N B:GLY296 4.5 54.3 1.0
N A:THR53 4.7 48.6 1.0
CB B:ALA295 4.7 58.3 1.0
O B:LEU294 4.8 63.8 1.0
CG A:ASN262 4.8 57.5 1.0
ND2 A:ASN262 4.9 52.5 1.0
O B:ALA70 4.9 62.2 1.0
C B:ALA295 4.9 54.9 1.0
CE A:LYS256 5.0 53.8 1.0
O A:SER51 5.0 57.4 1.0

Potassium binding site 2 out of 2 in 6nv8

Go back to Potassium Binding Sites List in 6nv8
Potassium binding site 2 out of 2 in the Perdeuterated Tyrosine Phenol-Lyase From Citrobacter Freundii Complexed with An Aminoacrylate Intermediate Formed From S-Ethyl-L- Cysteine and 4-Hydroxypyridine


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Perdeuterated Tyrosine Phenol-Lyase From Citrobacter Freundii Complexed with An Aminoacrylate Intermediate Formed From S-Ethyl-L- Cysteine and 4-Hydroxypyridine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1005

b:64.4
occ:1.00
 O A:HOH1148 2.7 53.6 1.0
O B:GLY52 2.8 59.5 1.0
OE1 A:GLU69 2.8 51.3 1.0
O B:HOH1668 2.9 64.0 1.0
O B:ASN262 3.0 60.4 1.0
O B:HOH1635 3.3 62.6 1.0
O A:GLU69 3.5 65.3 1.0
C B:GLY52 3.6 59.8 1.0
CB A:GLU69 3.7 55.7 1.0
CB B:ASN262 3.9 47.7 1.0
CD A:GLU69 3.9 64.8 1.0
CA B:GLY52 3.9 56.6 1.0
C B:ASN262 4.0 51.4 1.0
CA A:GLU69 4.0 53.5 1.0
CA B:ASN262 4.1 49.3 1.0
C A:GLU69 4.1 57.8 1.0
CA A:ALA295 4.2 54.1 1.0
CG A:GLU69 4.3 62.9 1.0
O A:HOH1140 4.3 57.7 1.0
N A:GLY296 4.5 48.9 1.0
CB A:ALA295 4.7 55.1 1.0
N B:THR53 4.7 59.8 1.0
O A:LEU294 4.8 59.3 1.0
ND2 B:ASN262 4.9 52.5 1.0
CG B:ASN262 4.9 51.4 1.0
C A:ALA295 4.9 50.5 1.0
CE B:LYS256 4.9 50.6 1.0
O B:SER51 5.0 63.8 1.0
OE2 A:GLU69 5.0 60.0 1.0

Reference:

R.S.Phillips, R.S.Phillips. N/A N/A.
Page generated: Mon Dec 14 01:01:52 2020

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