Atomistry » Potassium » PDB 6n93-6pc3 » 6nlj
Atomistry »
  Potassium »
    PDB 6n93-6pc3 »
      6nlj »

Potassium in PDB 6nlj: 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12)

Enzymatic activity of 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12)

All present enzymatic activity of 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12):
1.16.3.1;

Protein crystallography data

The structure of 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12), PDB code: 6nlj was solved by S.Lovell, A.Punchi-Hewage, K.P.Battaile, H.Yao, B.Nammalwar, K.K.Gnanasekaran, R.A.Bunce, A.B.Reitz, M.Rivera, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.09 / 1.65
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 129.291, 195.014, 203.220, 90.00, 90.00, 90.00
R / Rfree (%) 15.5 / 17.8

Potassium Binding Sites:

The binding sites of Potassium atom in the 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12) (pdb code 6nlj). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 3 binding sites of Potassium where determined in the 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12), PDB code: 6nlj:
Jump to Potassium binding site number: 1; 2; 3;

Potassium binding site 1 out of 3 in 6nlj

Go back to Potassium Binding Sites List in 6nlj
Potassium binding site 1 out of 3 in the 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K201

b:18.0
occ:1.00
OD1 E:ASN148 2.8 17.8 1.0
OE1 K:GLN151 2.9 19.2 1.0
OD1 K:ASN148 2.9 17.6 1.0
OE1 J:GLN151 2.9 18.1 1.0
OE1 A:GLN151 2.9 19.5 1.0
OE1 E:GLN151 2.9 17.5 1.0
OD1 J:ASN148 2.9 18.6 1.0
OD1 A:ASN148 3.0 18.8 1.0
CG E:ASN148 3.6 16.6 1.0
CG K:ASN148 3.7 18.8 1.0
CG J:ASN148 3.7 17.2 1.0
CG A:ASN148 3.7 17.4 1.0
CD K:GLN151 3.8 17.3 1.0
CD J:GLN151 3.8 18.2 1.0
CD A:GLN151 3.8 22.6 1.0
CD E:GLN151 3.9 19.2 1.0
ND2 E:ASN148 4.0 20.8 1.0
NE2 K:GLN151 4.0 18.4 1.0
ND2 A:ASN148 4.0 21.6 1.0
NE2 A:GLN151 4.1 17.8 1.0
NE2 J:GLN151 4.1 20.6 1.0
ND2 J:ASN148 4.1 18.7 1.0
NE2 E:GLN151 4.1 20.1 1.0
ND2 K:ASN148 4.1 19.0 1.0
CB K:ASN148 4.8 16.8 1.0
CB E:ASN148 4.9 16.6 1.0
CB J:ASN148 4.9 17.9 1.0
CB A:ASN148 4.9 17.2 1.0

Potassium binding site 2 out of 3 in 6nlj

Go back to Potassium Binding Sites List in 6nlj
Potassium binding site 2 out of 3 in the 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K201

b:19.0
occ:1.00
OD1 B:ASN148 2.8 20.2 1.0
OD1 G:ASN148 2.9 18.3 1.0
OD1 L:ASN148 2.9 20.8 1.0
OE1 G:GLN151 2.9 19.8 1.0
OE1 L:GLN151 2.9 19.0 1.0
OE1 C:GLN151 2.9 20.8 1.0
OE1 B:GLN151 2.9 18.6 1.0
OD1 C:ASN148 2.9 20.1 1.0
CG B:ASN148 3.7 20.3 1.0
CG L:ASN148 3.7 19.7 1.0
CG G:ASN148 3.7 18.6 1.0
CG C:ASN148 3.7 20.8 1.0
CD G:GLN151 3.9 19.2 1.0
CD B:GLN151 3.9 21.2 1.0
CD C:GLN151 3.9 20.1 1.0
CD L:GLN151 3.9 21.9 1.0
ND2 B:ASN148 4.0 21.0 1.0
ND2 G:ASN148 4.0 21.9 1.0
ND2 L:ASN148 4.1 21.4 1.0
ND2 C:ASN148 4.1 22.3 1.0
NE2 B:GLN151 4.1 20.7 1.0
NE2 G:GLN151 4.1 19.7 1.0
NE2 C:GLN151 4.1 19.4 1.0
NE2 L:GLN151 4.1 20.7 1.0
CB L:ASN148 4.9 19.8 1.0
CB G:ASN148 4.9 17.5 1.0
CB B:ASN148 4.9 20.1 1.0
CB C:ASN148 4.9 18.6 1.0

Potassium binding site 3 out of 3 in 6nlj

Go back to Potassium Binding Sites List in 6nlj
Potassium binding site 3 out of 3 in the 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of 1.65 A Resolution Structure of Apo Bfrb From Pseudomonas Aeruginosa in Complex with A Protein-Protein Interaction Inhibitor (Analog 12) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:K202

b:17.8
occ:1.00
OD1 D:ASN148 2.9 18.3 1.0
OD1 I:ASN148 2.9 19.8 1.0
OD1 F:ASN148 2.9 19.2 1.0
OE1 D:GLN151 2.9 17.3 1.0
OE1 F:GLN151 2.9 17.5 1.0
OE1 I:GLN151 2.9 19.2 1.0
CG I:ASN148 3.7 16.4 1.0
CG D:ASN148 3.7 18.7 1.0
CG F:ASN148 3.7 18.3 1.0
CD F:GLN151 3.9 19.6 1.0
CD D:GLN151 3.9 19.1 1.0
CD I:GLN151 3.9 17.2 1.0
ND2 I:ASN148 4.0 20.6 1.0
ND2 D:ASN148 4.0 19.5 1.0
ND2 F:ASN148 4.1 19.3 1.0
NE2 D:GLN151 4.1 18.3 1.0
NE2 F:GLN151 4.1 20.1 1.0
NE2 I:GLN151 4.1 18.4 1.0
CB F:ASN148 4.9 18.6 1.0
CB I:ASN148 4.9 19.4 1.0
CB D:ASN148 4.9 19.3 1.0

Reference:

A.N.D.Punchi Hewage, H.Yao, B.Nammalwar, K.K.Gnanasekaran, S.Lovell, R.A.Bunce, K.Eshelman, S.M.Phaniraj, M.M.Lee, B.R.Peterson, K.P.Battaile, A.B.Reitz, M.Rivera. Small Molecule Inhibitors of the Bfrb-Bfd Interaction Decrease Pseudomonas Aeruginosa Fitness and Potentiate Fluoroquinolone Activity. J.Am.Chem.Soc. V. 141 8171 2019.
ISSN: ESSN 1520-5126
PubMed: 31038945
DOI: 10.1021/JACS.9B00394
Page generated: Mon Aug 12 16:59:12 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy