Potassium in PDB 9es5: Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex
Enzymatic activity of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex
All present enzymatic activity of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex:
3.6.4.9;
Other elements in 9es5:
The structure of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex also contains other interesting chemical elements:
Potassium Binding Sites:
The binding sites of Potassium atom in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex
(pdb code 9es5). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 7 binding sites of Potassium where determined in the
Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex, PDB code: 9es5:
Jump to Potassium binding site number:
1;
2;
3;
4;
5;
6;
7;
Potassium binding site 1 out
of 7 in 9es5
Go back to
Potassium Binding Sites List in 9es5
Potassium binding site 1 out
of 7 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex
 Mono view
 Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K604
b:45.8
occ:1.00
|
O
|
A:THR30
|
2.7
|
35.5
|
1.0
|
O
|
A:LYS51
|
2.7
|
35.9
|
1.0
|
OG1
|
A:THR90
|
2.8
|
35.4
|
1.0
|
F2
|
A:BEF602
|
2.9
|
49.0
|
1.0
|
O1A
|
A:ADP601
|
3.2
|
58.3
|
1.0
|
OG1
|
A:THR30
|
3.4
|
35.5
|
1.0
|
O3A
|
A:ADP601
|
3.6
|
58.3
|
1.0
|
N
|
A:GLY53
|
3.7
|
34.1
|
1.0
|
O1B
|
A:ADP601
|
3.7
|
58.3
|
1.0
|
C
|
A:THR30
|
3.8
|
35.5
|
1.0
|
C
|
A:LYS51
|
3.9
|
35.9
|
1.0
|
CB
|
A:THR30
|
3.9
|
35.5
|
1.0
|
PA
|
A:ADP601
|
3.9
|
58.3
|
1.0
|
CB
|
A:THR90
|
4.0
|
35.4
|
1.0
|
BE
|
A:BEF602
|
4.2
|
49.0
|
1.0
|
PB
|
A:ADP601
|
4.2
|
58.3
|
1.0
|
C
|
A:ASP52
|
4.2
|
40.2
|
1.0
|
CA
|
A:ASP52
|
4.3
|
40.2
|
1.0
|
CA
|
A:GLY53
|
4.4
|
34.1
|
1.0
|
F1
|
A:BEF602
|
4.4
|
49.0
|
1.0
|
CA
|
A:THR30
|
4.5
|
35.5
|
1.0
|
N
|
A:ASP52
|
4.5
|
40.2
|
1.0
|
O2B
|
A:ADP601
|
4.5
|
58.3
|
1.0
|
NZ
|
A:LYS51
|
4.7
|
35.9
|
1.0
|
O2A
|
A:ADP601
|
4.7
|
58.3
|
1.0
|
CG2
|
A:THR90
|
4.7
|
35.4
|
1.0
|
N
|
A:MET31
|
4.8
|
33.5
|
1.0
|
CG
|
A:LYS51
|
4.8
|
35.9
|
1.0
|
CA
|
A:MET31
|
5.0
|
33.5
|
1.0
|
|
Potassium binding site 2 out
of 7 in 9es5
Go back to
Potassium Binding Sites List in 9es5
Potassium binding site 2 out
of 7 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex
 Mono view
 Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:K604
b:42.4
occ:1.00
|
O
|
B:THR30
|
2.7
|
34.0
|
1.0
|
F2
|
B:BEF602
|
2.7
|
41.6
|
1.0
|
O
|
B:LYS51
|
2.7
|
33.3
|
1.0
|
O1A
|
B:ADP601
|
3.0
|
38.9
|
1.0
|
OG1
|
B:THR90
|
3.1
|
31.4
|
1.0
|
OG1
|
B:THR30
|
3.6
|
34.0
|
1.0
|
O3A
|
B:ADP601
|
3.6
|
38.9
|
1.0
|
O1B
|
B:ADP601
|
3.7
|
38.9
|
1.0
|
PA
|
B:ADP601
|
3.8
|
38.9
|
1.0
|
C
|
B:THR30
|
3.8
|
34.0
|
1.0
|
N
|
B:GLY53
|
3.9
|
31.7
|
1.0
|
C
|
B:LYS51
|
3.9
|
33.3
|
1.0
|
CB
|
B:THR30
|
4.0
|
34.0
|
1.0
|
BE
|
B:BEF602
|
4.0
|
41.6
|
1.0
|
CB
|
B:THR90
|
4.2
|
31.4
|
1.0
|
PB
|
B:ADP601
|
4.3
|
38.9
|
1.0
|
F1
|
B:BEF602
|
4.3
|
41.6
|
1.0
|
CA
|
B:ASP52
|
4.4
|
38.0
|
1.0
|
C
|
B:ASP52
|
4.4
|
38.0
|
1.0
|
O2A
|
B:ADP601
|
4.5
|
38.9
|
1.0
|
NZ
|
B:LYS51
|
4.6
|
33.3
|
1.0
|
CA
|
B:GLY53
|
4.6
|
31.7
|
1.0
|
CA
|
B:THR30
|
4.6
|
34.0
|
1.0
|
N
|
B:ASP52
|
4.6
|
38.0
|
1.0
|
O2B
|
B:ADP601
|
4.7
|
38.9
|
1.0
|
CG
|
B:LYS51
|
4.8
|
33.3
|
1.0
|
N
|
B:MET31
|
4.8
|
30.4
|
1.0
|
F3
|
B:BEF602
|
4.8
|
41.6
|
1.0
|
CG2
|
B:THR90
|
4.9
|
31.4
|
1.0
|
CA
|
B:MET31
|
5.0
|
30.4
|
1.0
|
|
Potassium binding site 3 out
of 7 in 9es5
Go back to
Potassium Binding Sites List in 9es5
Potassium binding site 3 out
of 7 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex
 Mono view
 Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 3 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:K604
b:45.2
occ:1.00
|
O
|
C:THR30
|
2.7
|
34.8
|
1.0
|
O
|
C:LYS51
|
2.7
|
36.4
|
1.0
|
OG1
|
C:THR90
|
2.9
|
35.1
|
1.0
|
F2
|
C:BEF602
|
3.0
|
49.7
|
1.0
|
O1A
|
C:ADP601
|
3.2
|
58.3
|
1.0
|
OG1
|
C:THR30
|
3.4
|
34.8
|
1.0
|
O3A
|
C:ADP601
|
3.6
|
58.3
|
1.0
|
O1B
|
C:ADP601
|
3.7
|
58.3
|
1.0
|
N
|
C:GLY53
|
3.7
|
33.7
|
1.0
|
C
|
C:THR30
|
3.8
|
34.8
|
1.0
|
C
|
C:LYS51
|
3.8
|
36.4
|
1.0
|
CB
|
C:THR30
|
3.9
|
34.8
|
1.0
|
PA
|
C:ADP601
|
3.9
|
58.3
|
1.0
|
CB
|
C:THR90
|
4.1
|
35.1
|
1.0
|
CA
|
C:ASP52
|
4.2
|
39.8
|
1.0
|
PB
|
C:ADP601
|
4.3
|
58.3
|
1.0
|
C
|
C:ASP52
|
4.3
|
39.8
|
1.0
|
BE
|
C:BEF602
|
4.3
|
49.7
|
1.0
|
F1
|
C:BEF602
|
4.4
|
49.7
|
1.0
|
CA
|
C:GLY53
|
4.4
|
33.7
|
1.0
|
N
|
C:ASP52
|
4.5
|
39.8
|
1.0
|
CA
|
C:THR30
|
4.5
|
34.8
|
1.0
|
O2B
|
C:ADP601
|
4.6
|
58.3
|
1.0
|
NZ
|
C:LYS51
|
4.7
|
36.4
|
1.0
|
O2A
|
C:ADP601
|
4.7
|
58.3
|
1.0
|
CG
|
C:LYS51
|
4.8
|
36.4
|
1.0
|
N
|
C:MET31
|
4.8
|
35.4
|
1.0
|
CG2
|
C:THR90
|
4.8
|
35.1
|
1.0
|
CA
|
C:LYS51
|
5.0
|
36.4
|
1.0
|
CA
|
C:MET31
|
5.0
|
35.4
|
1.0
|
OG1
|
C:THR89
|
5.0
|
34.1
|
1.0
|
|
Potassium binding site 4 out
of 7 in 9es5
Go back to
Potassium Binding Sites List in 9es5
Potassium binding site 4 out
of 7 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex
 Mono view
 Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 4 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:K604
b:48.1
occ:1.00
|
O
|
D:THR30
|
2.7
|
37.4
|
1.0
|
F2
|
D:BEF602
|
2.7
|
50.0
|
1.0
|
O
|
D:LYS51
|
2.7
|
37.5
|
1.0
|
O1A
|
D:ADP601
|
3.0
|
58.3
|
1.0
|
OG1
|
D:THR90
|
3.0
|
37.0
|
1.0
|
OG1
|
D:THR30
|
3.5
|
37.4
|
1.0
|
O3A
|
D:ADP601
|
3.6
|
58.3
|
1.0
|
O1B
|
D:ADP601
|
3.7
|
58.3
|
1.0
|
PA
|
D:ADP601
|
3.8
|
58.3
|
1.0
|
C
|
D:THR30
|
3.8
|
37.4
|
1.0
|
N
|
D:GLY53
|
3.9
|
32.8
|
1.0
|
C
|
D:LYS51
|
3.9
|
37.5
|
1.0
|
CB
|
D:THR30
|
4.0
|
37.4
|
1.0
|
BE
|
D:BEF602
|
4.1
|
50.0
|
1.0
|
CB
|
D:THR90
|
4.1
|
37.0
|
1.0
|
PB
|
D:ADP601
|
4.2
|
58.3
|
1.0
|
CA
|
D:ASP52
|
4.4
|
39.9
|
1.0
|
F1
|
D:BEF602
|
4.4
|
50.0
|
1.0
|
C
|
D:ASP52
|
4.4
|
39.9
|
1.0
|
NZ
|
D:LYS51
|
4.5
|
37.5
|
1.0
|
CA
|
D:GLY53
|
4.5
|
32.8
|
1.0
|
O2A
|
D:ADP601
|
4.5
|
58.3
|
1.0
|
CA
|
D:THR30
|
4.6
|
37.4
|
1.0
|
N
|
D:ASP52
|
4.6
|
39.9
|
1.0
|
O2B
|
D:ADP601
|
4.6
|
58.3
|
1.0
|
CG
|
D:LYS51
|
4.8
|
37.5
|
1.0
|
N
|
D:MET31
|
4.8
|
35.1
|
1.0
|
CG2
|
D:THR90
|
4.9
|
37.0
|
1.0
|
F3
|
D:BEF602
|
5.0
|
50.0
|
1.0
|
|
Potassium binding site 5 out
of 7 in 9es5
Go back to
Potassium Binding Sites List in 9es5
Potassium binding site 5 out
of 7 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex
 Mono view
 Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 5 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:K604
b:38.5
occ:1.00
|
O
|
E:THR30
|
2.7
|
32.4
|
1.0
|
O
|
E:LYS51
|
2.7
|
33.1
|
1.0
|
F2
|
E:BEF602
|
2.9
|
39.4
|
1.0
|
OG1
|
E:THR90
|
3.1
|
31.2
|
1.0
|
O1A
|
E:ADP601
|
3.1
|
39.2
|
1.0
|
OG1
|
E:THR30
|
3.5
|
32.4
|
1.0
|
O3A
|
E:ADP601
|
3.5
|
39.2
|
1.0
|
O1B
|
E:ADP601
|
3.8
|
39.2
|
1.0
|
PA
|
E:ADP601
|
3.8
|
39.2
|
1.0
|
C
|
E:THR30
|
3.8
|
32.4
|
1.0
|
N
|
E:GLY53
|
3.8
|
31.0
|
1.0
|
C
|
E:LYS51
|
3.9
|
33.1
|
1.0
|
CB
|
E:THR30
|
3.9
|
32.4
|
1.0
|
CB
|
E:THR90
|
4.2
|
31.2
|
1.0
|
BE
|
E:BEF602
|
4.2
|
39.4
|
1.0
|
PB
|
E:ADP601
|
4.2
|
39.2
|
1.0
|
F1
|
E:BEF602
|
4.3
|
39.4
|
1.0
|
CA
|
E:ASP52
|
4.3
|
36.9
|
1.0
|
C
|
E:ASP52
|
4.3
|
36.9
|
1.0
|
CA
|
E:GLY53
|
4.5
|
31.0
|
1.0
|
N
|
E:ASP52
|
4.5
|
36.9
|
1.0
|
CA
|
E:THR30
|
4.5
|
32.4
|
1.0
|
O2B
|
E:ADP601
|
4.6
|
39.2
|
1.0
|
O2A
|
E:ADP601
|
4.6
|
39.2
|
1.0
|
NZ
|
E:LYS51
|
4.6
|
33.1
|
1.0
|
CG
|
E:LYS51
|
4.8
|
33.1
|
1.0
|
N
|
E:MET31
|
4.8
|
31.4
|
1.0
|
CG2
|
E:THR90
|
4.9
|
31.2
|
1.0
|
CA
|
E:MET31
|
5.0
|
31.4
|
1.0
|
|
Potassium binding site 6 out
of 7 in 9es5
Go back to
Potassium Binding Sites List in 9es5
Potassium binding site 6 out
of 7 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex
 Mono view
 Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 6 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:K604
b:42.6
occ:1.00
|
O
|
F:THR30
|
2.7
|
34.9
|
1.0
|
O
|
F:LYS51
|
2.7
|
36.2
|
1.0
|
F2
|
F:BEF602
|
3.0
|
42.3
|
1.0
|
O1A
|
F:ADP601
|
3.0
|
41.1
|
1.0
|
OG1
|
F:THR90
|
3.1
|
32.1
|
1.0
|
O3A
|
F:ADP601
|
3.5
|
41.1
|
1.0
|
OG1
|
F:THR30
|
3.6
|
34.9
|
1.0
|
O1B
|
F:ADP601
|
3.7
|
41.1
|
1.0
|
PA
|
F:ADP601
|
3.8
|
41.1
|
1.0
|
C
|
F:THR30
|
3.8
|
34.9
|
1.0
|
N
|
F:GLY53
|
3.9
|
34.2
|
1.0
|
C
|
F:LYS51
|
3.9
|
36.2
|
1.0
|
CB
|
F:THR30
|
4.0
|
34.9
|
1.0
|
BE
|
F:BEF602
|
4.2
|
42.3
|
1.0
|
CB
|
F:THR90
|
4.2
|
32.1
|
1.0
|
PB
|
F:ADP601
|
4.2
|
41.1
|
1.0
|
F1
|
F:BEF602
|
4.3
|
42.3
|
1.0
|
CA
|
F:ASP52
|
4.3
|
39.5
|
1.0
|
C
|
F:ASP52
|
4.4
|
39.5
|
1.0
|
O2A
|
F:ADP601
|
4.5
|
41.1
|
1.0
|
NZ
|
F:LYS51
|
4.5
|
36.2
|
1.0
|
CA
|
F:GLY53
|
4.6
|
34.2
|
1.0
|
N
|
F:ASP52
|
4.6
|
39.5
|
1.0
|
CA
|
F:THR30
|
4.6
|
34.9
|
1.0
|
O2B
|
F:ADP601
|
4.6
|
41.1
|
1.0
|
CG
|
F:LYS51
|
4.8
|
36.2
|
1.0
|
N
|
F:MET31
|
4.8
|
29.9
|
1.0
|
CG2
|
F:THR90
|
4.9
|
32.1
|
1.0
|
F3
|
F:BEF602
|
5.0
|
42.3
|
1.0
|
CA
|
F:MET31
|
5.0
|
29.9
|
1.0
|
|
Potassium binding site 7 out
of 7 in 9es5
Go back to
Potassium Binding Sites List in 9es5
Potassium binding site 7 out
of 7 in the Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex
 Mono view
 Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 7 of Adp:BEF3-Bound Human Mitochondrial HSP60-HSP10 Half-Football Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:K604
b:44.9
occ:1.00
|
O
|
G:THR30
|
2.7
|
36.2
|
1.0
|
O
|
G:LYS51
|
2.7
|
36.3
|
1.0
|
F2
|
G:BEF602
|
3.0
|
48.6
|
1.0
|
OG1
|
G:THR90
|
3.0
|
35.9
|
1.0
|
O1A
|
G:ADP601
|
3.0
|
58.3
|
1.0
|
O3A
|
G:ADP601
|
3.5
|
58.3
|
1.0
|
O1B
|
G:ADP601
|
3.6
|
58.3
|
1.0
|
OG1
|
G:THR30
|
3.6
|
36.2
|
1.0
|
PA
|
G:ADP601
|
3.8
|
58.3
|
1.0
|
C
|
G:THR30
|
3.8
|
36.2
|
1.0
|
N
|
G:GLY53
|
3.9
|
34.4
|
1.0
|
C
|
G:LYS51
|
3.9
|
36.3
|
1.0
|
CB
|
G:THR30
|
4.0
|
36.2
|
1.0
|
CB
|
G:THR90
|
4.1
|
35.9
|
1.0
|
PB
|
G:ADP601
|
4.1
|
58.3
|
1.0
|
BE
|
G:BEF602
|
4.2
|
48.6
|
1.0
|
F1
|
G:BEF602
|
4.2
|
48.6
|
1.0
|
CA
|
G:ASP52
|
4.4
|
39.7
|
1.0
|
C
|
G:ASP52
|
4.4
|
39.7
|
1.0
|
O2B
|
G:ADP601
|
4.5
|
58.3
|
1.0
|
O2A
|
G:ADP601
|
4.5
|
58.3
|
1.0
|
NZ
|
G:LYS51
|
4.5
|
36.3
|
1.0
|
CA
|
G:GLY53
|
4.5
|
34.4
|
1.0
|
CA
|
G:THR30
|
4.6
|
36.2
|
1.0
|
N
|
G:ASP52
|
4.6
|
39.7
|
1.0
|
CG
|
G:LYS51
|
4.8
|
36.3
|
1.0
|
N
|
G:MET31
|
4.8
|
33.0
|
1.0
|
CG2
|
G:THR90
|
4.8
|
35.9
|
1.0
|
CA
|
G:MET31
|
5.0
|
33.0
|
1.0
|
|
Reference:
I.Tascon,
J.P.Lopez-Alonso,
I.Ubarretxena-Belandia,
J.Vilchez,
Y.Shkolnisky,
A.Azem,
J.Hirsch.
Structural Basis For Atp-Triggered Assembly of Human Mitochondrial HSP60-HSP10 Chaperonin To Be Published.
Page generated: Sat Aug 9 18:54:18 2025
|