Potassium in PDB 8zap: EXOC110T Class 1 Channelrhodopsin
Potassium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
24;
Binding sites:
The binding sites of Potassium atom in the EXOC110T Class 1 Channelrhodopsin
(pdb code 8zap). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 24 binding sites of Potassium where determined in the
EXOC110T Class 1 Channelrhodopsin, PDB code: 8zap:
Jump to Potassium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Potassium binding site 1 out
of 24 in 8zap
Go back to
Potassium Binding Sites List in 8zap
Potassium binding site 1 out
of 24 in the EXOC110T Class 1 Channelrhodopsin
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of EXOC110T Class 1 Channelrhodopsin within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K301
b:32.9
occ:1.00
|
O
|
A:HOH409
|
2.7
|
30.0
|
1.0
|
|
CE1
|
A:TYR81
|
3.1
|
13.4
|
1.0
|
|
CD1
|
A:TYR81
|
3.1
|
11.1
|
1.0
|
|
CE
|
A:LYS84
|
3.3
|
10.9
|
1.0
|
|
OD2
|
A:ASP105
|
3.4
|
16.2
|
1.0
|
|
CE
|
A:MET80
|
3.5
|
15.4
|
1.0
|
|
O
|
A:CYS77
|
3.6
|
12.3
|
1.0
|
|
SG
|
A:CYS77
|
3.6
|
24.6
|
1.0
|
|
CB
|
A:MET80
|
3.7
|
9.6
|
1.0
|
|
OD2
|
A:ASP229
|
3.9
|
32.2
|
1.0
|
|
CZ
|
A:TYR81
|
4.1
|
14.5
|
1.0
|
|
CG
|
A:TYR81
|
4.1
|
11.3
|
1.0
|
|
NZ
|
A:LYS84
|
4.1
|
15.8
|
1.0
|
|
CA
|
A:CYS77
|
4.2
|
8.3
|
1.0
|
|
CD
|
A:LYS84
|
4.2
|
9.1
|
1.0
|
|
N
|
A:TYR81
|
4.2
|
8.0
|
1.0
|
|
C
|
A:CYS77
|
4.3
|
9.6
|
1.0
|
|
CG
|
A:ASP105
|
4.3
|
16.5
|
1.0
|
|
C
|
A:MET80
|
4.4
|
8.8
|
1.0
|
|
CB
|
A:CYS77
|
4.4
|
10.4
|
1.0
|
|
CB
|
A:ASP105
|
4.4
|
14.1
|
1.0
|
|
SD
|
A:MET80
|
4.5
|
25.0
|
1.0
|
|
CA
|
A:MET80
|
4.6
|
8.6
|
1.0
|
|
CG
|
A:MET80
|
4.7
|
9.6
|
1.0
|
|
OH
|
A:TYR81
|
4.7
|
15.8
|
1.0
|
|
CA
|
A:TYR81
|
4.8
|
8.1
|
1.0
|
|
CB
|
A:TYR81
|
4.8
|
9.8
|
1.0
|
|
O
|
A:MET80
|
4.9
|
11.9
|
1.0
|
|
CE2
|
A:TYR81
|
4.9
|
11.0
|
1.0
|
|
CD2
|
A:TYR81
|
4.9
|
9.8
|
1.0
|
|
CG
|
A:ASP229
|
5.0
|
26.4
|
1.0
|
|
Potassium binding site 2 out
of 24 in 8zap
Go back to
Potassium Binding Sites List in 8zap
Potassium binding site 2 out
of 24 in the EXOC110T Class 1 Channelrhodopsin
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of EXOC110T Class 1 Channelrhodopsin within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K302
b:26.8
occ:1.00
|
O
|
A:ASN99
|
2.7
|
8.1
|
1.0
|
|
O
|
A:HOH403
|
2.9
|
30.0
|
1.0
|
|
O
|
A:HOH401
|
2.9
|
30.0
|
1.0
|
|
O
|
A:HOH402
|
3.1
|
30.0
|
1.0
|
|
C
|
A:ASN99
|
3.3
|
8.6
|
1.0
|
|
CA
|
A:TRP102
|
3.4
|
7.5
|
1.0
|
|
CA
|
A:ASN99
|
3.5
|
9.2
|
1.0
|
|
CD2
|
A:TRP102
|
3.6
|
10.2
|
1.0
|
|
O
|
A:TYR101
|
3.6
|
9.8
|
1.0
|
|
CE3
|
A:TRP102
|
3.7
|
10.0
|
1.0
|
|
CG
|
A:TRP102
|
3.7
|
7.9
|
1.0
|
|
O
|
A:LEU98
|
3.8
|
14.6
|
1.0
|
|
N
|
A:TRP102
|
3.8
|
6.0
|
1.0
|
|
C
|
A:TYR101
|
3.9
|
6.9
|
1.0
|
|
CE1
|
A:TYR222
|
3.9
|
6.6
|
1.0
|
|
CE2
|
A:TRP102
|
4.0
|
7.9
|
1.0
|
|
CB
|
A:TRP102
|
4.1
|
8.0
|
1.0
|
|
CD1
|
A:TRP102
|
4.3
|
7.8
|
1.0
|
|
OH
|
A:TYR222
|
4.3
|
8.8
|
1.0
|
|
NZ
|
A:LYS84
|
4.3
|
15.8
|
1.0
|
|
CZ3
|
A:TRP102
|
4.3
|
7.4
|
1.0
|
|
N
|
A:TRP100
|
4.3
|
8.0
|
1.0
|
|
N
|
A:TYR103
|
4.3
|
9.1
|
1.0
|
|
OD1
|
A:ASP105
|
4.4
|
16.7
|
1.0
|
|
C
|
A:TRP102
|
4.4
|
8.2
|
1.0
|
|
NE1
|
A:TRP102
|
4.4
|
8.3
|
1.0
|
|
N
|
A:ASN99
|
4.4
|
9.8
|
1.0
|
|
C
|
A:LEU98
|
4.5
|
11.8
|
1.0
|
|
C
|
A:TRP100
|
4.5
|
8.1
|
1.0
|
|
O
|
A:TRP100
|
4.5
|
9.1
|
1.0
|
|
CZ
|
A:TYR222
|
4.5
|
6.7
|
1.0
|
|
CB
|
A:ASN99
|
4.6
|
7.3
|
1.0
|
|
CZ2
|
A:TRP102
|
4.6
|
6.7
|
1.0
|
|
N
|
A:TYR101
|
4.7
|
5.3
|
1.0
|
|
CH2
|
A:TRP102
|
4.7
|
6.8
|
1.0
|
|
CD1
|
A:TYR222
|
4.8
|
5.8
|
1.0
|
|
CA
|
A:TYR101
|
4.9
|
4.9
|
1.0
|
|
OD1
|
A:ASN99
|
5.0
|
10.6
|
1.0
|
|
CA
|
A:TRP100
|
5.0
|
8.2
|
1.0
|
|
Potassium binding site 3 out
of 24 in 8zap
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Potassium Binding Sites List in 8zap
Potassium binding site 3 out
of 24 in the EXOC110T Class 1 Channelrhodopsin
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 3 of EXOC110T Class 1 Channelrhodopsin within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K303
b:35.3
occ:1.00
|
O
|
A:SER70
|
3.0
|
19.8
|
1.0
|
|
K
|
A:K304
|
3.1
|
42.5
|
1.0
|
|
SG
|
A:CYS74
|
3.3
|
17.7
|
1.0
|
|
O
|
A:LYS233
|
3.3
|
19.9
|
1.0
|
|
C
|
A:SER70
|
3.7
|
15.2
|
1.0
|
|
CA
|
A:SER70
|
3.8
|
14.3
|
1.0
|
|
CD1
|
A:LEU113
|
3.8
|
17.3
|
1.0
|
|
CA
|
A:GLY237
|
3.9
|
14.2
|
1.0
|
|
CG2
|
A:ILE73
|
4.0
|
15.6
|
1.0
|
|
N
|
A:CYS74
|
4.0
|
8.5
|
1.0
|
|
CB
|
A:ILE73
|
4.1
|
12.7
|
1.0
|
|
C
|
A:LYS233
|
4.1
|
22.4
|
1.0
|
|
CB
|
A:SER70
|
4.1
|
15.7
|
1.0
|
|
CB
|
A:CYS74
|
4.2
|
11.0
|
1.0
|
|
N
|
A:GLY237
|
4.3
|
18.0
|
1.0
|
|
CA
|
A:LYS233
|
4.4
|
24.9
|
1.0
|
|
CA
|
A:CYS74
|
4.5
|
10.1
|
1.0
|
|
SD
|
A:MET43
|
4.6
|
16.5
|
1.0
|
|
C
|
A:ILE73
|
4.7
|
9.6
|
1.0
|
|
CB
|
A:LYS233
|
4.8
|
24.9
|
1.0
|
|
CE
|
A:MET43
|
4.8
|
11.0
|
1.0
|
|
CA
|
A:ILE73
|
4.9
|
11.5
|
1.0
|
|
N
|
A:GLY71
|
4.9
|
12.5
|
1.0
|
|
Potassium binding site 4 out
of 24 in 8zap
Go back to
Potassium Binding Sites List in 8zap
Potassium binding site 4 out
of 24 in the EXOC110T Class 1 Channelrhodopsin
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 4 of EXOC110T Class 1 Channelrhodopsin within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K304
b:42.5
occ:1.00
|
OD2
|
A:ASP116
|
2.9
|
21.8
|
1.0
|
|
K
|
A:K303
|
3.1
|
35.3
|
1.0
|
|
CA
|
A:GLY237
|
3.6
|
14.2
|
1.0
|
|
CB
|
A:SER70
|
3.6
|
15.7
|
1.0
|
|
OG
|
A:SER70
|
3.7
|
24.7
|
1.0
|
|
CD1
|
A:LEU113
|
3.7
|
17.3
|
1.0
|
|
CD2
|
A:PHE236
|
3.8
|
16.8
|
1.0
|
|
CE2
|
A:PHE236
|
3.8
|
18.7
|
1.0
|
|
CA
|
A:SER70
|
3.9
|
14.3
|
1.0
|
|
CG
|
A:ASP116
|
4.0
|
18.6
|
1.0
|
|
N
|
A:GLY237
|
4.1
|
18.0
|
1.0
|
|
CG
|
A:MET240
|
4.4
|
18.9
|
1.0
|
|
CB
|
A:MET240
|
4.4
|
19.8
|
1.0
|
|
CG
|
A:LEU113
|
4.5
|
16.9
|
1.0
|
|
CB
|
A:ASP116
|
4.5
|
13.1
|
1.0
|
|
O
|
A:PHE236
|
4.6
|
20.8
|
1.0
|
|
C
|
A:PHE236
|
4.6
|
18.9
|
1.0
|
|
C
|
A:GLY237
|
4.8
|
13.2
|
1.0
|
|
N
|
A:SER70
|
4.9
|
15.4
|
1.0
|
|
C
|
A:SER70
|
4.9
|
15.2
|
1.0
|
|
O
|
A:GLY237
|
4.9
|
14.6
|
1.0
|
|
OD1
|
A:ASP116
|
4.9
|
23.0
|
1.0
|
|
O
|
A:LYS233
|
4.9
|
19.9
|
1.0
|
|
O
|
A:SER70
|
5.0
|
19.8
|
1.0
|
|
CG
|
A:PHE236
|
5.0
|
17.6
|
1.0
|
|
Potassium binding site 5 out
of 24 in 8zap
Go back to
Potassium Binding Sites List in 8zap
Potassium binding site 5 out
of 24 in the EXOC110T Class 1 Channelrhodopsin
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 5 of EXOC110T Class 1 Channelrhodopsin within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K305
b:40.6
occ:1.00
|
O
|
A:HOH405
|
1.5
|
30.0
|
1.0
|
|
O
|
A:HOH410
|
1.6
|
30.0
|
1.0
|
|
O
|
A:HOH407
|
2.3
|
30.0
|
1.0
|
|
O
|
A:HOH411
|
2.4
|
30.0
|
1.0
|
|
OE1
|
A:GLN218
|
3.1
|
13.3
|
1.0
|
|
CD2
|
A:TRP100
|
3.5
|
5.7
|
1.0
|
|
CE2
|
A:TRP100
|
3.6
|
7.0
|
1.0
|
|
CE3
|
A:TRP100
|
3.6
|
5.7
|
1.0
|
|
O
|
A:TRP100
|
3.6
|
9.1
|
1.0
|
|
OD1
|
A:ASN18
|
3.7
|
12.7
|
1.0
|
|
CZ3
|
A:TRP100
|
3.8
|
6.4
|
1.0
|
|
CZ2
|
A:TRP100
|
3.8
|
6.7
|
1.0
|
|
CH2
|
A:TRP100
|
3.9
|
6.2
|
1.0
|
|
CG
|
A:TRP100
|
4.0
|
5.0
|
1.0
|
|
CD
|
A:GLN218
|
4.1
|
9.4
|
1.0
|
|
NE1
|
A:TRP100
|
4.1
|
6.6
|
1.0
|
|
CA
|
A:TRP100
|
4.3
|
8.2
|
1.0
|
|
C
|
A:TRP100
|
4.3
|
8.1
|
1.0
|
|
NE2
|
A:GLN218
|
4.3
|
8.3
|
1.0
|
|
CD1
|
A:ILE17
|
4.3
|
12.7
|
1.0
|
|
CD1
|
A:TRP100
|
4.4
|
4.7
|
1.0
|
|
CG
|
A:ASN18
|
4.6
|
11.3
|
1.0
|
|
CB
|
A:TRP100
|
4.8
|
5.4
|
1.0
|
|
ND2
|
A:ASN18
|
4.8
|
14.1
|
1.0
|
|
OH
|
A:TYR222
|
4.9
|
8.8
|
1.0
|
|
Potassium binding site 6 out
of 24 in 8zap
Go back to
Potassium Binding Sites List in 8zap
Potassium binding site 6 out
of 24 in the EXOC110T Class 1 Channelrhodopsin
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 6 of EXOC110T Class 1 Channelrhodopsin within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K306
b:30.1
occ:1.00
|
O
|
A:SER97
|
2.6
|
15.5
|
1.0
|
|
O
|
A:HOH401
|
3.1
|
30.0
|
1.0
|
|
N
|
A:TYR101
|
3.2
|
5.3
|
1.0
|
|
CA
|
A:LEU98
|
3.5
|
9.9
|
1.0
|
|
CB
|
A:TYR101
|
3.5
|
3.9
|
1.0
|
|
C
|
A:LEU98
|
3.6
|
11.8
|
1.0
|
|
O
|
A:TYR101
|
3.6
|
9.8
|
1.0
|
|
CD2
|
A:TYR101
|
3.6
|
5.6
|
1.0
|
|
C
|
A:SER97
|
3.7
|
12.4
|
1.0
|
|
CA
|
A:TYR101
|
3.8
|
4.9
|
1.0
|
|
N
|
A:TRP100
|
3.8
|
8.0
|
1.0
|
|
CD2
|
A:LEU104
|
3.8
|
8.1
|
1.0
|
|
O
|
A:LEU98
|
3.9
|
14.6
|
1.0
|
|
CG
|
A:TYR101
|
4.0
|
4.8
|
1.0
|
|
N
|
A:ASN99
|
4.0
|
9.8
|
1.0
|
|
N
|
A:LEU98
|
4.0
|
10.9
|
1.0
|
|
C
|
A:TYR101
|
4.1
|
6.9
|
1.0
|
|
C
|
A:TRP100
|
4.2
|
8.1
|
1.0
|
|
CB
|
A:LEU104
|
4.3
|
7.0
|
1.0
|
|
CA
|
A:TRP100
|
4.3
|
8.2
|
1.0
|
|
CB
|
A:TRP100
|
4.4
|
5.4
|
1.0
|
|
C
|
A:ASN99
|
4.4
|
8.6
|
1.0
|
|
CD2
|
A:LEU98
|
4.5
|
13.4
|
1.0
|
|
CG
|
A:LEU104
|
4.5
|
7.4
|
1.0
|
|
CE2
|
A:TYR101
|
4.7
|
6.3
|
1.0
|
|
CB
|
A:LEU98
|
4.7
|
11.5
|
1.0
|
|
CA
|
A:ASN99
|
4.8
|
9.2
|
1.0
|
|
CA
|
A:SER97
|
5.0
|
7.5
|
1.0
|
|
Potassium binding site 7 out
of 24 in 8zap
Go back to
Potassium Binding Sites List in 8zap
Potassium binding site 7 out
of 24 in the EXOC110T Class 1 Channelrhodopsin
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 7 of EXOC110T Class 1 Channelrhodopsin within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K307
b:45.0
occ:1.00
|
O
|
A:HOH406
|
2.1
|
30.0
|
1.0
|
|
OD1
|
A:ASN67
|
2.9
|
23.8
|
1.0
|
|
C
|
A:PHE119
|
3.7
|
13.3
|
1.0
|
|
CB
|
A:PHE119
|
3.7
|
11.3
|
1.0
|
|
O
|
A:PHE119
|
3.7
|
17.0
|
1.0
|
|
OG1
|
A:THR120
|
3.7
|
15.2
|
1.0
|
|
N
|
A:THR120
|
3.8
|
13.2
|
1.0
|
|
CG
|
A:ASN67
|
3.8
|
22.0
|
1.0
|
|
O
|
A:VAL66
|
3.8
|
21.1
|
1.0
|
|
CA
|
A:THR120
|
3.9
|
12.6
|
1.0
|
|
NE
|
A:ARG244
|
3.9
|
28.4
|
1.0
|
|
CA
|
A:ASN67
|
4.0
|
18.6
|
1.0
|
|
C
|
A:VAL66
|
4.1
|
16.4
|
1.0
|
|
N
|
A:ASN67
|
4.1
|
16.4
|
1.0
|
|
OD1
|
A:ASP116
|
4.3
|
23.0
|
1.0
|
|
CG2
|
A:VAL66
|
4.3
|
17.8
|
1.0
|
|
CA
|
A:PHE119
|
4.3
|
11.5
|
1.0
|
|
CB
|
A:THR120
|
4.4
|
14.1
|
1.0
|
|
CD
|
A:ARG244
|
4.4
|
26.1
|
1.0
|
|
O
|
A:ASP116
|
4.5
|
12.2
|
1.0
|
|
CB
|
A:ASN67
|
4.5
|
18.4
|
1.0
|
|
CB
|
A:VAL66
|
4.5
|
13.9
|
1.0
|
|
CZ
|
A:ARG244
|
4.6
|
25.8
|
1.0
|
|
ND2
|
A:ASN67
|
4.7
|
24.5
|
1.0
|
|
NH2
|
A:ARG244
|
4.7
|
21.6
|
1.0
|
|
CG2
|
A:THR120
|
4.8
|
16.7
|
1.0
|
|
CG
|
A:PHE119
|
4.9
|
11.6
|
1.0
|
|
CA
|
A:VAL66
|
5.0
|
15.1
|
1.0
|
|
Potassium binding site 8 out
of 24 in 8zap
Go back to
Potassium Binding Sites List in 8zap
Potassium binding site 8 out
of 24 in the EXOC110T Class 1 Channelrhodopsin
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 8 of EXOC110T Class 1 Channelrhodopsin within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K308
b:32.5
occ:1.00
|
N
|
A:GLY71
|
2.9
|
12.5
|
1.0
|
|
O
|
A:ASN67
|
3.1
|
19.9
|
1.0
|
|
O
|
A:HOH404
|
3.1
|
30.0
|
1.0
|
|
CB
|
A:SER70
|
3.5
|
15.7
|
1.0
|
|
CB
|
A:MET43
|
3.7
|
8.9
|
1.0
|
|
CA
|
A:GLY71
|
3.7
|
9.7
|
1.0
|
|
N
|
A:SER70
|
3.8
|
15.4
|
1.0
|
|
CD2
|
A:LEU44
|
3.8
|
9.4
|
1.0
|
|
C
|
A:SER70
|
3.8
|
15.2
|
1.0
|
|
CA
|
A:SER70
|
3.9
|
14.3
|
1.0
|
|
OG
|
A:SER70
|
3.9
|
24.7
|
1.0
|
|
CA
|
A:SER68
|
3.9
|
13.8
|
1.0
|
|
C
|
A:SER68
|
4.0
|
14.4
|
1.0
|
|
O
|
A:MET43
|
4.1
|
11.1
|
1.0
|
|
C
|
A:MET43
|
4.1
|
9.2
|
1.0
|
|
O
|
A:SER68
|
4.1
|
14.6
|
1.0
|
|
C
|
A:ASN67
|
4.1
|
15.6
|
1.0
|
|
NH1
|
A:ARG244
|
4.3
|
23.7
|
1.0
|
|
N
|
A:LEU44
|
4.4
|
9.0
|
1.0
|
|
CA
|
A:MET43
|
4.5
|
8.0
|
1.0
|
|
CD2
|
A:LEU47
|
4.5
|
15.6
|
1.0
|
|
N
|
A:SER68
|
4.5
|
12.9
|
1.0
|
|
N
|
A:LEU69
|
4.5
|
14.6
|
1.0
|
|
CG
|
A:MET43
|
4.6
|
11.1
|
1.0
|
|
OG1
|
A:THR241
|
4.7
|
13.5
|
1.0
|
|
CA
|
A:LEU44
|
4.7
|
9.1
|
1.0
|
|
C
|
A:LEU69
|
4.7
|
13.4
|
1.0
|
|
SD
|
A:MET43
|
4.8
|
16.5
|
1.0
|
|
CB
|
A:LEU47
|
4.8
|
13.7
|
1.0
|
|
CG
|
A:LEU44
|
4.8
|
9.1
|
1.0
|
|
C
|
A:GLY71
|
4.9
|
10.5
|
1.0
|
|
O
|
A:SER70
|
5.0
|
19.8
|
1.0
|
|
Potassium binding site 9 out
of 24 in 8zap
Go back to
Potassium Binding Sites List in 8zap
Potassium binding site 9 out
of 24 in the EXOC110T Class 1 Channelrhodopsin
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 9 of EXOC110T Class 1 Channelrhodopsin within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:K301
b:32.5
occ:1.00
|
O
|
B:HOH409
|
2.7
|
30.0
|
1.0
|
|
CE1
|
B:TYR81
|
3.1
|
15.6
|
1.0
|
|
CD1
|
B:TYR81
|
3.1
|
13.3
|
1.0
|
|
CE
|
B:LYS84
|
3.3
|
12.2
|
1.0
|
|
OD2
|
B:ASP105
|
3.4
|
15.7
|
1.0
|
|
CE
|
B:MET80
|
3.4
|
14.8
|
1.0
|
|
O
|
B:CYS77
|
3.6
|
11.9
|
1.0
|
|
SG
|
B:CYS77
|
3.6
|
25.1
|
1.0
|
|
CB
|
B:MET80
|
3.6
|
9.8
|
1.0
|
|
OD2
|
B:ASP229
|
3.9
|
29.8
|
1.0
|
|
CZ
|
B:TYR81
|
4.1
|
15.5
|
1.0
|
|
CG
|
B:TYR81
|
4.1
|
12.2
|
1.0
|
|
NZ
|
B:LYS84
|
4.1
|
15.7
|
1.0
|
|
CA
|
B:CYS77
|
4.2
|
9.6
|
1.0
|
|
N
|
B:TYR81
|
4.2
|
8.0
|
1.0
|
|
CD
|
B:LYS84
|
4.2
|
10.0
|
1.0
|
|
C
|
B:CYS77
|
4.3
|
10.5
|
1.0
|
|
CG
|
B:ASP105
|
4.3
|
16.6
|
1.0
|
|
C
|
B:MET80
|
4.4
|
8.6
|
1.0
|
|
CB
|
B:CYS77
|
4.4
|
10.4
|
1.0
|
|
CB
|
B:ASP105
|
4.4
|
13.4
|
1.0
|
|
SD
|
B:MET80
|
4.5
|
22.2
|
1.0
|
|
CA
|
B:MET80
|
4.6
|
9.5
|
1.0
|
|
CG
|
B:MET80
|
4.6
|
10.1
|
1.0
|
|
OH
|
B:TYR81
|
4.7
|
17.2
|
1.0
|
|
CA
|
B:TYR81
|
4.8
|
8.5
|
1.0
|
|
CB
|
B:TYR81
|
4.8
|
10.4
|
1.0
|
|
O
|
B:MET80
|
4.9
|
10.9
|
1.0
|
|
CE2
|
B:TYR81
|
4.9
|
11.9
|
1.0
|
|
CD2
|
B:TYR81
|
4.9
|
11.7
|
1.0
|
|
Potassium binding site 10 out
of 24 in 8zap
Go back to
Potassium Binding Sites List in 8zap
Potassium binding site 10 out
of 24 in the EXOC110T Class 1 Channelrhodopsin
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 10 of EXOC110T Class 1 Channelrhodopsin within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:K302
b:28.8
occ:1.00
|
O
|
B:ASN99
|
2.7
|
10.6
|
1.0
|
|
O
|
B:HOH403
|
2.9
|
30.0
|
1.0
|
|
O
|
B:HOH401
|
2.9
|
30.0
|
1.0
|
|
O
|
B:HOH402
|
3.2
|
30.0
|
1.0
|
|
C
|
B:ASN99
|
3.3
|
9.4
|
1.0
|
|
CA
|
B:TRP102
|
3.4
|
8.8
|
1.0
|
|
CA
|
B:ASN99
|
3.5
|
9.8
|
1.0
|
|
CD2
|
B:TRP102
|
3.6
|
10.4
|
1.0
|
|
O
|
B:TYR101
|
3.6
|
10.5
|
1.0
|
|
O
|
B:LEU98
|
3.8
|
15.1
|
1.0
|
|
CE3
|
B:TRP102
|
3.8
|
8.8
|
1.0
|
|
CG
|
B:TRP102
|
3.8
|
9.0
|
1.0
|
|
N
|
B:TRP102
|
3.8
|
6.4
|
1.0
|
|
C
|
B:TYR101
|
3.8
|
7.9
|
1.0
|
|
CE1
|
B:TYR222
|
3.9
|
7.3
|
1.0
|
|
CE2
|
B:TRP102
|
4.0
|
8.7
|
1.0
|
|
CB
|
B:TRP102
|
4.1
|
8.3
|
1.0
|
|
CD1
|
B:TRP102
|
4.3
|
9.1
|
1.0
|
|
NZ
|
B:LYS84
|
4.3
|
15.7
|
1.0
|
|
OH
|
B:TYR222
|
4.3
|
11.1
|
1.0
|
|
N
|
B:TRP100
|
4.3
|
8.7
|
1.0
|
|
CZ3
|
B:TRP102
|
4.3
|
7.5
|
1.0
|
|
N
|
B:TYR103
|
4.3
|
10.2
|
1.0
|
|
OD1
|
B:ASP105
|
4.4
|
18.8
|
1.0
|
|
C
|
B:TRP102
|
4.4
|
10.2
|
1.0
|
|
N
|
B:ASN99
|
4.4
|
11.7
|
1.0
|
|
NE1
|
B:TRP102
|
4.4
|
9.5
|
1.0
|
|
C
|
B:LEU98
|
4.5
|
12.2
|
1.0
|
|
C
|
B:TRP100
|
4.5
|
9.6
|
1.0
|
|
O
|
B:TRP100
|
4.5
|
10.8
|
1.0
|
|
CZ
|
B:TYR222
|
4.5
|
8.1
|
1.0
|
|
CB
|
B:ASN99
|
4.6
|
7.5
|
1.0
|
|
CZ2
|
B:TRP102
|
4.6
|
7.2
|
1.0
|
|
N
|
B:TYR101
|
4.6
|
6.7
|
1.0
|
|
CH2
|
B:TRP102
|
4.7
|
7.4
|
1.0
|
|
CD1
|
B:TYR222
|
4.8
|
7.2
|
1.0
|
|
CA
|
B:TYR101
|
4.9
|
5.8
|
1.0
|
|
OD1
|
B:ASN99
|
5.0
|
12.7
|
1.0
|
|
CA
|
B:TRP100
|
5.0
|
10.2
|
1.0
|
|
Reference:
Y.Shan,
L.Zhao,
M.Chen,
X.Li,
M.Zhang,
D.Pei.
Channelrhodopsins with Distinct Chromophores and Binding Patterns. Nat Commun V. 15 7292 2024.
ISSN: ESSN 2041-1723
PubMed: 39181878
DOI: 10.1073/PNAS.1818707116
Page generated: Sat Aug 9 18:23:31 2025
|
