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Potassium in PDB 8yti: Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment)
Protein crystallography data
The structure of Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment), PDB code: 8yti
was solved by
Z.Adhireksan,
B.Qiuye,
S.Padavattan,
C.A.Davey,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 92.22 / 2.70 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 104.852, 102.111, 216.179, 90, 96.34, 90 |
| R / Rfree (%) | 21 / 26.7 |
Other elements in 8yti:
The structure of Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment) also contains other interesting chemical elements:
| Calcium | (Ca) | 52 atoms |
| Chlorine | (Cl) | 8 atoms |
Potassium Binding Sites:
The binding sites of Potassium atom in the Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment)
(pdb code 8yti). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 8 binding sites of Potassium where determined in the Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment), PDB code: 8yti:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Potassium where determined in the Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment), PDB code: 8yti:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Potassium binding site 1 out of 8 in 8yti
Go back to
Potassium Binding Sites List in 8yti
Potassium binding site 1 out
of 8 in the Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 1 of Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment) within 5.0Å range:
|
Potassium binding site 2 out of 8 in 8yti
Go back to
Potassium Binding Sites List in 8yti
Potassium binding site 2 out
of 8 in the Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 2 of Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment) within 5.0Å range:
|
Potassium binding site 3 out of 8 in 8yti
Go back to
Potassium Binding Sites List in 8yti
Potassium binding site 3 out
of 8 in the Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 3 of Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment) within 5.0Å range:
|
Potassium binding site 4 out of 8 in 8yti
Go back to
Potassium Binding Sites List in 8yti
Potassium binding site 4 out
of 8 in the Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 4 of Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment) within 5.0Å range:
|
Potassium binding site 5 out of 8 in 8yti
Go back to
Potassium Binding Sites List in 8yti
Potassium binding site 5 out
of 8 in the Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 5 of Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment) within 5.0Å range:
|
Potassium binding site 6 out of 8 in 8yti
Go back to
Potassium Binding Sites List in 8yti
Potassium binding site 6 out
of 8 in the Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 6 of Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment) within 5.0Å range:
|
Potassium binding site 7 out of 8 in 8yti
Go back to
Potassium Binding Sites List in 8yti
Potassium binding site 7 out
of 8 in the Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 7 of Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment) within 5.0Å range:
|
Potassium binding site 8 out of 8 in 8yti
Go back to
Potassium Binding Sites List in 8yti
Potassium binding site 8 out
of 8 in the Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 8 of Crystal Structure of Nucleosome-H1X Linker Histone Assembly (Sticky- 169A Dna Fragment) within 5.0Å range:
|
Reference:
Z.Adhireksan,
D.Sharma,
B.Qiuye,
P.L.Lee,
S.Padavattan,
C.A.Davey.
Linker Histones Associate Heterogeneously with Nucleosomes in the Condensed State To Be Published.
Page generated: Sat Aug 9 18:22:49 2025
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