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Potassium in PDB 8gj6: LSD1-Corest in Complex with T16

Enzymatic activity of LSD1-Corest in Complex with T16

All present enzymatic activity of LSD1-Corest in Complex with T16:
1.14.99.66;

Protein crystallography data

The structure of LSD1-Corest in Complex with T16, PDB code: 8gj6 was solved by J.Caroli, A.Mattevi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.46 / 2.77
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 118.355, 178.664, 234.966, 90, 90, 90
R / Rfree (%) 22.3 / 25.1

Potassium Binding Sites:

The binding sites of Potassium atom in the LSD1-Corest in Complex with T16 (pdb code 8gj6). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the LSD1-Corest in Complex with T16, PDB code: 8gj6:

Potassium binding site 1 out of 1 in 8gj6

Go back to Potassium Binding Sites List in 8gj6
Potassium binding site 1 out of 1 in the LSD1-Corest in Complex with T16


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of LSD1-Corest in Complex with T16 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K902

b:145.6
occ:1.00
OE1 A:GLU379 3.2 101.5 1.0
O A:CYS360 3.6 97.4 1.0
CB A:CYS360 4.0 95.5 1.0
CD A:GLU379 4.2 100.8 1.0
N A:CYS360 4.3 99.7 1.0
C A:CYS360 4.5 93.2 1.0
OE2 A:GLU379 4.5 101.3 1.0
CA A:CYS360 4.5 96.1 1.0
O A:GLN358 4.8 108.3 1.0
CD1 A:LEU362 4.8 92.0 1.0
CE1 A:HIS532 5.0 89.4 1.0
OD2 A:ASP375 5.0 118.3 1.0

Reference:

J.Caroli, A.Mattevi. Distal Drug Resistance Mutations Promote Covalent Inhibitor-Adduct Grob Fragmentation in LSD1 To Be Published.
Page generated: Sun Feb 9 07:49:29 2025

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