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Potassium in PDB 7u3m: Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid
Enzymatic activity of Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid
All present enzymatic activity of Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid:
3.5.1.48; 3.5.1.62;
3.5.1.48; 3.5.1.62;
Protein crystallography data
The structure of Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid, PDB code: 7u3m
was solved by
C.J.Herbst-Gervasoni,
D.W.Christianson,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 60.96 / 2.10 |
| Space group | P 31 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 80.75, 80.75, 248.874, 90, 90, 120 |
| R / Rfree (%) | 19.6 / 23.3 |
Other elements in 7u3m:
The structure of Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid also contains other interesting chemical elements:
| Zinc | (Zn) | 1 atom |
Potassium Binding Sites:
The binding sites of Potassium atom in the Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid
(pdb code 7u3m). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid, PDB code: 7u3m:
Jump to Potassium binding site number: 1; 2;
In total 2 binding sites of Potassium where determined in the Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid, PDB code: 7u3m:
Jump to Potassium binding site number: 1; 2;
Potassium binding site 1 out of 2 in 7u3m
Go back to
Potassium Binding Sites List in 7u3m
Potassium binding site 1 out
of 2 in the Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 1 of Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid within 5.0Å range:
|
Potassium binding site 2 out of 2 in 7u3m
Go back to
Potassium Binding Sites List in 7u3m
Potassium binding site 2 out
of 2 in the Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 2 of Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with N-Methylpiperazine Benzhydroxamic Acid within 5.0Å range:
|
Reference:
P.Zeyen,
Y.Zeyn,
D.Herp,
F.Mahmoudi,
T.Z.Yesiloglu,
F.Erdmann,
M.Schmidt,
D.Robaa,
C.Romier,
J.Ridinger,
C.J.Herbst-Gervasoni,
D.W.Christianson,
I.Oehme,
M.Jung,
O.H.Kramer,
W.Sippl.
Identification of Histone Deacetylase 10 (HDAC10) Inhibitors That Modulate Autophagy in Transformed Cells. Eur.J.Med.Chem. V. 234 14272 2022.
ISSN: ISSN 0223-5234
PubMed: 35306288
DOI: 10.1016/J.EJMECH.2022.114272
Page generated: Sat Aug 9 15:01:08 2025
ISSN: ISSN 0223-5234
PubMed: 35306288
DOI: 10.1016/J.EJMECH.2022.114272
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