Atomistry » Potassium » PDB 7pka-7qr1 » 7pxh
Atomistry »
  Potassium »
    PDB 7pka-7qr1 »
      7pxh »

Potassium in PDB 7pxh: Emodepside-Bound Drosophila Slo Channel

Other elements in 7pxh:

The structure of Emodepside-Bound Drosophila Slo Channel also contains other interesting chemical elements:

Calcium (Ca) 8 atoms
Magnesium (Mg) 4 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Emodepside-Bound Drosophila Slo Channel (pdb code 7pxh). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 6 binding sites of Potassium where determined in the Emodepside-Bound Drosophila Slo Channel, PDB code: 7pxh:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6;

Potassium binding site 1 out of 6 in 7pxh

Go back to Potassium Binding Sites List in 7pxh
Potassium binding site 1 out of 6 in the Emodepside-Bound Drosophila Slo Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Emodepside-Bound Drosophila Slo Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1209

b:42.7
occ:0.50
 O C:GLY303 2.9 47.3 1.0
O D:GLY303 2.9 48.2 1.0
O B:GLY303 2.9 48.5 1.0
O A:GLY303 2.9 47.6 1.0
O C:TYR304 3.1 51.6 1.0
O A:TYR304 3.2 52.0 1.0
O B:TYR304 3.3 52.8 1.0
O D:TYR304 3.4 53.2 1.0
K A:K1210 3.6 42.7 0.5
C C:TYR304 3.7 51.6 1.0
C A:TYR304 3.7 52.0 1.0
C B:TYR304 3.8 52.8 1.0
C D:TYR304 3.9 53.2 1.0
C C:GLY303 4.1 47.3 1.0
C D:GLY303 4.1 48.2 1.0
C A:GLY303 4.1 47.6 1.0
C B:GLY303 4.1 48.5 1.0
CA C:TYR304 4.3 51.6 1.0
N C:GLY305 4.3 56.8 1.0
K C:K1209 4.3 54.1 0.2
N A:GLY305 4.3 56.0 1.0
CA A:TYR304 4.4 52.0 1.0
N B:GLY305 4.4 56.2 1.0
CA B:TYR304 4.4 52.8 1.0
N D:GLY305 4.5 57.9 1.0
CA D:TYR304 4.5 53.2 1.0
CA A:GLY305 4.6 56.0 1.0
CA C:GLY305 4.6 56.8 1.0
CA B:GLY305 4.7 56.2 1.0
N C:TYR304 4.7 51.6 1.0
CA D:GLY305 4.7 57.9 1.0
N A:TYR304 4.8 52.0 1.0
N B:TYR304 4.8 52.8 1.0
N D:TYR304 4.8 53.2 1.0

Potassium binding site 2 out of 6 in 7pxh

Go back to Potassium Binding Sites List in 7pxh
Potassium binding site 2 out of 6 in the Emodepside-Bound Drosophila Slo Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Emodepside-Bound Drosophila Slo Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1210

b:42.7
occ:0.50
 O B:VAL302 2.7 49.0 1.0
O D:VAL302 2.7 48.9 1.0
O A:GLY303 2.7 47.6 1.0
O C:GLY303 2.7 47.3 1.0
O C:VAL302 2.8 48.0 1.0
O B:GLY303 2.8 48.5 1.0
O A:VAL302 2.8 48.7 1.0
O D:GLY303 2.8 48.2 1.0
K A:K1211 3.0 41.5 0.5
C A:GLY303 3.6 47.6 1.0
C C:GLY303 3.6 47.3 1.0
C D:GLY303 3.6 48.2 1.0
K A:K1209 3.6 42.7 0.5
C B:GLY303 3.6 48.5 1.0
C D:VAL302 3.8 48.9 1.0
CA D:GLY303 3.8 48.2 1.0
C B:VAL302 3.8 49.0 1.0
CA A:GLY303 3.8 47.6 1.0
C C:VAL302 3.8 48.0 1.0
C A:VAL302 3.9 48.7 1.0
CA B:GLY303 3.9 48.5 1.0
CA C:GLY303 3.9 47.3 1.0
N D:GLY303 4.2 48.2 1.0
N A:GLY303 4.3 47.6 1.0
N B:GLY303 4.3 48.5 1.0
N C:GLY303 4.3 47.3 1.0
N C:TYR304 4.7 51.6 1.0
N A:TYR304 4.8 52.0 1.0
N B:TYR304 4.8 52.8 1.0
N D:TYR304 4.8 53.2 1.0

Potassium binding site 3 out of 6 in 7pxh

Go back to Potassium Binding Sites List in 7pxh
Potassium binding site 3 out of 6 in the Emodepside-Bound Drosophila Slo Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Emodepside-Bound Drosophila Slo Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1211

b:41.5
occ:0.50
 O C:VAL302 2.9 48.0 1.0
O D:THR301 2.9 53.1 1.0
O B:THR301 2.9 53.5 1.0
O A:THR301 2.9 52.9 1.0
O A:VAL302 3.0 48.7 1.0
K A:K1210 3.0 42.7 0.5
O C:THR301 3.0 52.9 1.0
O B:VAL302 3.1 49.0 1.0
O D:VAL302 3.1 48.9 1.0
C C:VAL302 3.6 48.0 1.0
C A:VAL302 3.6 48.7 1.0
C D:VAL302 3.7 48.9 1.0
C B:VAL302 3.7 49.0 1.0
K A:K1212 3.8 47.5 0.5
C D:THR301 3.9 53.1 1.0
C A:THR301 3.9 52.9 1.0
C B:THR301 3.9 53.5 1.0
C C:THR301 3.9 52.9 1.0
CA C:VAL302 4.0 48.0 1.0
CA A:VAL302 4.1 48.7 1.0
CA D:VAL302 4.1 48.9 1.0
CA B:VAL302 4.1 49.0 1.0
N A:VAL302 4.4 48.7 1.0
N D:VAL302 4.4 48.9 1.0
N C:VAL302 4.4 48.0 1.0
N B:VAL302 4.4 49.0 1.0
N A:GLY303 4.5 47.6 1.0
N C:GLY303 4.5 47.3 1.0
N D:GLY303 4.6 48.2 1.0
N B:GLY303 4.6 48.5 1.0
CA A:GLY303 4.9 47.6 1.0
CA C:GLY303 4.9 47.3 1.0
CA D:THR301 5.0 53.1 1.0
CA A:THR301 5.0 52.9 1.0
CA D:GLY303 5.0 48.2 1.0

Potassium binding site 4 out of 6 in 7pxh

Go back to Potassium Binding Sites List in 7pxh
Potassium binding site 4 out of 6 in the Emodepside-Bound Drosophila Slo Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Emodepside-Bound Drosophila Slo Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1212

b:47.5
occ:0.50
 O C:THR301 2.9 52.9 1.0
OG1 B:THR301 3.0 53.5 1.0
O A:THR301 3.0 52.9 1.0
O B:THR301 3.0 53.5 1.0
O D:THR301 3.0 53.1 1.0
OG1 D:THR301 3.0 53.1 1.0
OG1 A:THR301 3.0 52.9 1.0
OG1 C:THR301 3.2 52.9 1.0
CB A:THR301 3.5 52.9 1.0
CB B:THR301 3.5 53.5 1.0
CB D:THR301 3.5 53.1 1.0
K A:K1213 3.6 75.7 0.2
CB C:THR301 3.7 52.9 1.0
K A:K1211 3.8 41.5 0.5
C B:THR301 4.0 53.5 1.0
C A:THR301 4.0 52.9 1.0
C C:THR301 4.0 52.9 1.0
C D:THR301 4.0 53.1 1.0
CA A:THR301 4.4 52.9 1.0
CA B:THR301 4.4 53.5 1.0
CA D:THR301 4.4 53.1 1.0
CA C:THR301 4.5 52.9 1.0
CG2 A:THR301 4.7 52.9 1.0
CG2 B:THR301 4.7 53.5 1.0
CG2 D:THR301 4.7 53.1 1.0
CG2 C:THR301 5.0 52.9 1.0
O B:SER300 5.0 57.7 1.0
O D:SER300 5.0 55.8 1.0

Potassium binding site 5 out of 6 in 7pxh

Go back to Potassium Binding Sites List in 7pxh
Potassium binding site 5 out of 6 in the Emodepside-Bound Drosophila Slo Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Emodepside-Bound Drosophila Slo Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1213

b:75.7
occ:0.25
 O10 B:8I21209 3.2 86.5 1.0
O30 B:8I21209 3.3 86.5 1.0
K A:K1212 3.6 47.5 0.5
O41 B:8I21209 3.8 86.5 1.0
C88 B:8I21209 3.8 86.5 1.0
OG1 A:THR301 3.9 52.9 1.0
OG1 C:THR301 3.9 52.9 1.0
N6 B:8I21209 4.0 86.5 1.0
C9 B:8I21209 4.0 86.5 1.0
O20 B:8I21209 4.2 86.5 1.0
OG1 B:THR301 4.2 53.5 1.0
C65 B:8I21209 4.2 86.5 1.0
OG1 D:THR301 4.3 53.1 1.0
C39 B:8I21209 4.3 86.5 1.0
C4 B:8I21209 4.4 86.5 1.0
O25 B:8I21209 4.4 86.5 1.0
O40 B:8I21209 4.4 86.5 1.0
C7 B:8I21209 4.5 86.5 1.0
C29 B:8I21209 4.5 86.5 1.0
C2 B:8I21209 4.7 86.5 1.0
C24 B:8I21209 4.7 86.5 1.0
CB A:THR301 4.8 52.9 1.0
CB C:THR301 4.9 52.9 1.0
C19 B:8I21209 4.9 86.5 1.0
O11 B:8I21209 5.0 86.5 1.0

Potassium binding site 6 out of 6 in 7pxh

Go back to Potassium Binding Sites List in 7pxh
Potassium binding site 6 out of 6 in the Emodepside-Bound Drosophila Slo Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Emodepside-Bound Drosophila Slo Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K1209

b:54.1
occ:0.25
 O C:TYR304 4.2 51.6 1.0
O B:TYR304 4.2 52.8 1.0
O D:TYR304 4.2 53.2 1.0
O A:TYR304 4.2 52.0 1.0
K A:K1209 4.3 42.7 0.5
CA C:GLY305 4.8 56.8 1.0
CA B:GLY305 4.8 56.2 1.0
CA D:GLY305 4.9 57.9 1.0
CA A:GLY305 4.9 56.0 1.0
O C:GLY305 5.0 56.8 1.0
O A:GLY305 5.0 56.0 1.0
C C:GLY305 5.0 56.8 1.0

Reference:

T.Raisch, A.Brockmann, U.Ebbinghaus-Kintscher, J.Freigang, O.Gutbrod, J.Kubicek, B.Maertens, O.Hofnagel, S.Raunser. Small Molecule Modulation of the Drosophila Slo Channel Elucidated By Cryo-Em To Be Published.
DOI: 10.1038/S41467-021-27435-W
Page generated: Sat Aug 9 14:06:28 2025

Last articles

Mg in 5BTD
Mg in 5BTC
Mg in 5BTA
Mg in 5BON
Mg in 5BSU
Mg in 5BST
Mg in 5BSM
Mg in 5BSK
Mg in 5BS8
Mg in 5BRQ
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy