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Potassium in PDB 6xg6: Full-Length Human Mitochondrial HSP90 (TRAP1) with Adp-BEF3

Other elements in 6xg6:

The structure of Full-Length Human Mitochondrial HSP90 (TRAP1) with Adp-BEF3 also contains other interesting chemical elements:

Fluorine (F) 6 atoms
Magnesium (Mg) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Full-Length Human Mitochondrial HSP90 (TRAP1) with Adp-BEF3 (pdb code 6xg6). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Full-Length Human Mitochondrial HSP90 (TRAP1) with Adp-BEF3, PDB code: 6xg6:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 6xg6

Go back to Potassium Binding Sites List in 6xg6
Potassium binding site 1 out of 2 in the Full-Length Human Mitochondrial HSP90 (TRAP1) with Adp-BEF3


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Full-Length Human Mitochondrial HSP90 (TRAP1) with Adp-BEF3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K904

b:40.6
occ:1.00
O A:GLY202 2.8 41.9 1.0
O A:ASN171 2.8 45.9 1.0
OH A:TYR206 2.9 36.1 1.0
O2A A:ADP901 3.1 51.2 1.0
O A:ARG177 3.2 42.7 1.0
C5' A:ADP901 3.3 51.2 1.0
O A:THR174 3.3 42.6 1.0
CE2 A:TYR206 3.4 36.1 1.0
CZ A:TYR206 3.5 36.1 1.0
C A:ASN171 3.8 45.9 1.0
C A:GLY202 3.8 41.9 1.0
C A:ARG177 4.2 42.7 1.0
CA A:GLY202 4.2 41.9 1.0
O5' A:ADP901 4.3 51.2 1.0
C4' A:ADP901 4.3 51.2 1.0
PA A:ADP901 4.3 51.2 1.0
N A:ARG177 4.3 42.7 1.0
N A:ALA176 4.4 40.1 1.0
CA A:ASN171 4.5 45.9 1.0
C A:THR174 4.5 42.6 1.0
CD2 A:TYR206 4.6 36.1 1.0
N A:LEU172 4.6 43.8 1.0
CE1 A:TYR206 4.6 36.1 1.0
CA A:LEU172 4.7 43.8 1.0
CA A:ARG177 4.8 42.7 1.0
O A:LEU172 4.8 43.8 1.0
C A:ALA176 4.9 40.1 1.0
N A:VAL203 4.9 36.5 1.0
CA A:ALA176 5.0 40.1 1.0
O4' A:ADP901 5.0 51.2 1.0
CB A:ASN171 5.0 45.9 1.0
C A:LEU172 5.0 43.8 1.0

Potassium binding site 2 out of 2 in 6xg6

Go back to Potassium Binding Sites List in 6xg6
Potassium binding site 2 out of 2 in the Full-Length Human Mitochondrial HSP90 (TRAP1) with Adp-BEF3


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Full-Length Human Mitochondrial HSP90 (TRAP1) with Adp-BEF3 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K904

b:45.0
occ:1.00
O B:GLY202 2.9 40.1 1.0
O B:ASN171 2.9 49.5 1.0
O2A B:ADP901 3.0 51.2 1.0
OH B:TYR206 3.3 36.9 1.0
CE2 B:TYR206 3.3 36.9 1.0
C5' B:ADP901 3.5 51.2 1.0
O B:ARG177 3.5 49.5 1.0
O B:THR174 3.6 47.8 1.0
CZ B:TYR206 3.6 36.9 1.0
C B:ASN171 3.8 49.5 1.0
C B:GLY202 3.9 40.1 1.0
PA B:ADP901 4.2 51.2 1.0
O5' B:ADP901 4.3 51.2 1.0
CD2 B:TYR206 4.3 36.9 1.0
CA B:LEU172 4.4 45.8 1.0
N B:ALA176 4.5 44.9 1.0
C B:ARG177 4.5 49.5 1.0
C4' B:ADP901 4.5 51.2 1.0
N B:LEU172 4.5 45.8 1.0
CA B:GLY202 4.5 40.1 1.0
O B:LEU172 4.6 45.8 1.0
C B:THR174 4.7 47.8 1.0
N B:ARG177 4.7 49.5 1.0
O3A B:ADP901 4.7 51.2 1.0
CA B:ASN171 4.8 49.5 1.0
CE1 B:TYR206 4.8 36.9 1.0
C B:LEU172 4.8 45.8 1.0
N B:VAL203 4.9 35.6 1.0
CA B:ILE175 5.0 46.5 1.0

Reference:

F.Wang, Y.Liu, Z.Yu, S.Li, S.Feng, Y.Cheng, D.A.Agard. General and Robust Covalently Linked Graphene Oxide Affinity Grids For High-Resolution Cryo-Em. Proc.Natl.Acad.Sci.Usa V. 117 24269 2020.
ISSN: ESSN 1091-6490
PubMed: 32913054
DOI: 10.1073/PNAS.2009707117
Page generated: Mon Aug 12 18:21:07 2024

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