Atomistry » Potassium » PDB 6rvz-6u9p » 6suu
Atomistry »
  Potassium »
    PDB 6rvz-6u9p »
      6suu »

Potassium in PDB 6suu: uc(Nmr) Structure of KRAS32R G9T Conformer G-Quadruplex Within Kras Promoter Region

Potassium Binding Sites:

The binding sites of Potassium atom in the uc(Nmr) Structure of KRAS32R G9T Conformer G-Quadruplex Within Kras Promoter Region (pdb code 6suu). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the uc(Nmr) Structure of KRAS32R G9T Conformer G-Quadruplex Within Kras Promoter Region, PDB code: 6suu:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 6suu

Go back to Potassium Binding Sites List in 6suu
Potassium binding site 1 out of 2 in the uc(Nmr) Structure of KRAS32R G9T Conformer G-Quadruplex Within Kras Promoter Region


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of uc(Nmr) Structure of KRAS32R G9T Conformer G-Quadruplex Within Kras Promoter Region within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K101

b:0.0
occ:1.00
O6 A:DG27 2.5 0.0 1.0
O6 A:DG13 2.6 0.0 1.0
O6 A:DG32 2.6 0.0 1.0
O6 A:DG4 2.6 0.0 1.0
O6 A:DG12 2.6 0.0 1.0
O6 A:DG3 2.7 0.0 1.0
O6 A:DG26 2.7 0.0 1.0
O6 A:DG7 3.0 0.0 1.0
H1 A:DG32 3.2 0.0 1.0
C6 A:DG4 3.3 0.0 1.0
C6 A:DG32 3.3 0.0 1.0
C6 A:DG26 3.3 0.0 1.0
H1 A:DG4 3.4 0.0 1.0
H1 A:DG12 3.4 0.0 1.0
C6 A:DG12 3.5 0.0 1.0
C6 A:DG27 3.5 0.0 1.0
N1 A:DG32 3.6 0.0 1.0
C6 A:DG13 3.6 0.0 1.0
H1 A:DG27 3.6 0.0 1.0
K A:K102 3.7 0.0 1.0
N1 A:DG4 3.8 0.0 1.0
C6 A:DG3 3.8 0.0 1.0
N1 A:DG12 3.8 0.0 1.0
C5 A:DG26 3.9 0.0 1.0
N1 A:DG27 3.9 0.0 1.0
N7 A:DG26 4.0 0.0 1.0
H1 A:DG26 4.1 0.0 1.0
N1 A:DG26 4.1 0.0 1.0
C6 A:DG7 4.1 0.0 1.0
H1 A:DG13 4.2 0.0 1.0
C5 A:DG4 4.2 0.0 1.0
H1 A:DG3 4.3 0.0 1.0
N1 A:DG13 4.3 0.0 1.0
C5 A:DG32 4.5 0.0 1.0
N1 A:DG3 4.6 0.0 1.0
H1 A:DG7 4.6 0.0 1.0
C5 A:DG13 4.6 0.0 1.0
N1 A:DG7 4.8 0.0 1.0
C5 A:DG3 4.8 0.0 1.0
C5 A:DG12 4.8 0.0 1.0
C2 A:DG4 4.8 0.0 1.0
C5 A:DG27 4.8 0.0 1.0
C2 A:DG32 4.8 0.0 1.0
N7 A:DG13 4.8 0.0 1.0
H8 A:DG31 4.9 0.0 1.0
N7 A:DG4 4.9 0.0 1.0
H22 A:DG12 5.0 0.0 1.0

Potassium binding site 2 out of 2 in 6suu

Go back to Potassium Binding Sites List in 6suu
Potassium binding site 2 out of 2 in the uc(Nmr) Structure of KRAS32R G9T Conformer G-Quadruplex Within Kras Promoter Region


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of uc(Nmr) Structure of KRAS32R G9T Conformer G-Quadruplex Within Kras Promoter Region within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K102

b:0.0
occ:1.00
O6 A:DG26 2.5 0.0 1.0
O6 A:DG11 2.6 0.0 1.0
O6 A:DG12 2.7 0.0 1.0
O6 A:DG3 2.7 0.0 1.0
O6 A:DG6 2.7 0.0 1.0
O6 A:DG7 2.9 0.0 1.0
O6 A:DG2 3.0 0.0 1.0
O6 A:DG25 3.1 0.0 1.0
C6 A:DG3 3.4 0.0 1.0
C6 A:DG12 3.4 0.0 1.0
C6 A:DG7 3.5 0.0 1.0
H1 A:DG25 3.6 0.0 1.0
H1 A:DG11 3.6 0.0 1.0
C6 A:DG11 3.6 0.0 1.0
C6 A:DG6 3.7 0.0 1.0
C6 A:DG26 3.7 0.0 1.0
K A:K101 3.7 0.0 1.0
H1 A:DG6 3.7 0.0 1.0
C6 A:DG2 3.8 0.0 1.0
C6 A:DG25 3.8 0.0 1.0
N1 A:DG7 3.9 0.0 1.0
H1 A:DG2 3.9 0.0 1.0
H1 A:DG26 3.9 0.0 1.0
H1 A:DG7 3.9 0.0 1.0
N1 A:DG3 4.0 0.0 1.0
N1 A:DG12 4.0 0.0 1.0
N1 A:DG25 4.0 0.0 1.0
N1 A:DG11 4.0 0.0 1.0
H1 A:DG3 4.1 0.0 1.0
H1 A:DG12 4.1 0.0 1.0
N1 A:DG6 4.2 0.0 1.0
N1 A:DG26 4.2 0.0 1.0
N1 A:DG2 4.3 0.0 1.0
C5 A:DG3 4.3 0.0 1.0
C5 A:DG12 4.4 0.0 1.0
C5 A:DG7 4.5 0.0 1.0
C5 A:DG2 4.7 0.0 1.0
C5 A:DG6 4.8 0.0 1.0
C5 A:DG25 4.8 0.0 1.0
N7 A:DG12 4.8 0.0 1.0
N7 A:DG3 4.8 0.0 1.0
C5 A:DG11 4.8 0.0 1.0
C5 A:DG26 4.9 0.0 1.0
H61 A:DA1 4.9 0.0 1.0
H3 A:DT10 4.9 0.0 1.0
C2 A:DG7 5.0 0.0 1.0

Reference:

J.Marquevielle, C.Robert, O.Lagrabette, M.Wahid, A.Bourdoncle, L.Xodo, J.L.Mergny, G.Salgado. Structure of Multiple G-Quadruplexes in Equilibrium in Kras Promoter Region To Be Published.
Page generated: Mon Aug 12 17:36:17 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy