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Potassium in PDB 6jrd: Zhd Complex with Hydrolyzed Beta-Zol

Protein crystallography data

The structure of Zhd Complex with Hydrolyzed Beta-Zol, PDB code: 6jrd was solved by X.J.Hu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.00 / 1.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 74.536, 89.969, 112.728, 90.00, 90.00, 90.00
R / Rfree (%) 13.8 / 16.1

Potassium Binding Sites:

The binding sites of Potassium atom in the Zhd Complex with Hydrolyzed Beta-Zol (pdb code 6jrd). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Zhd Complex with Hydrolyzed Beta-Zol, PDB code: 6jrd:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 6jrd

Go back to Potassium Binding Sites List in 6jrd
Potassium binding site 1 out of 2 in the Zhd Complex with Hydrolyzed Beta-Zol


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Zhd Complex with Hydrolyzed Beta-Zol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K306

b:26.0
occ:0.75
N A:ASP250 3.2 15.6 1.0
C A:HIS248 3.3 15.1 1.0
CA A:HIS248 3.4 15.5 1.0
N A:VAL251 3.5 15.4 1.0
CB A:ASP250 3.6 20.1 1.0
N A:PRO249 3.6 15.9 1.0
O A:HIS248 3.7 15.0 1.0
CA A:ASP250 3.8 17.4 1.0
CB A:HIS248 3.9 15.6 1.0
CG2 A:VAL251 3.9 19.3 1.0
CD A:PRO249 3.9 17.1 1.0
CG A:ASP250 4.1 28.0 1.0
C A:ASP250 4.2 15.9 1.0
C A:PRO249 4.2 15.7 1.0
CA A:PRO249 4.4 15.7 1.0
OD1 A:ASP250 4.5 27.5 1.0
CB A:VAL251 4.5 16.4 1.0
CG A:PRO249 4.6 20.9 1.0
CG A:HIS248 4.6 16.3 1.0
CA A:VAL251 4.6 15.1 1.0
OD2 A:ASP250 4.6 34.0 1.0
CD2 A:HIS248 4.7 19.2 1.0
N A:HIS248 4.7 14.1 1.0
O A:SER247 5.0 16.5 1.0

Potassium binding site 2 out of 2 in 6jrd

Go back to Potassium Binding Sites List in 6jrd
Potassium binding site 2 out of 2 in the Zhd Complex with Hydrolyzed Beta-Zol


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Zhd Complex with Hydrolyzed Beta-Zol within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K306

b:25.9
occ:0.65
N B:ASP250 3.2 16.8 1.0
C B:HIS248 3.3 14.6 1.0
CA B:HIS248 3.4 14.9 1.0
CB B:ASP250 3.5 20.5 1.0
N B:VAL251 3.5 16.0 1.0
N B:PRO249 3.6 14.3 1.0
O B:HIS248 3.7 14.9 1.0
CA B:ASP250 3.8 18.0 1.0
CB B:HIS248 3.8 16.2 1.0
CD B:PRO249 3.9 16.2 1.0
CG2 B:VAL251 4.0 19.7 1.0
CG B:ASP250 4.0 28.7 1.0
C B:ASP250 4.2 16.2 1.0
C B:PRO249 4.2 13.8 1.0
OD1 B:ASP250 4.3 26.8 1.0
CA B:PRO249 4.5 14.3 1.0
CB B:VAL251 4.5 17.1 1.0
OD2 B:ASP250 4.5 34.9 1.0
CG B:HIS248 4.6 16.0 1.0
CA B:VAL251 4.6 15.9 1.0
CD2 B:HIS248 4.6 20.4 1.0
CG B:PRO249 4.6 20.3 1.0
N B:HIS248 4.8 13.5 1.0
O B:SER247 5.0 14.7 1.0

Reference:

X.J.Hu, H.J.Zhou, L.Li. Structure of Zhd Complex To Be Published.
Page generated: Sat Aug 9 11:28:05 2025

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