Potassium »
PDB 6doj-6dxv »
6dpc »
Potassium in PDB 6dpc: Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C
Enzymatic activity of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C
All present enzymatic activity of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C:
3.1.26.4;
3.1.26.4;
Protein crystallography data
The structure of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C, PDB code: 6dpc
was solved by
N.L.Samara,
W.Yang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 20.01 / 1.34 |
| Space group | C 1 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 81.821, 37.426, 61.946, 90.00, 96.83, 90.00 |
| R / Rfree (%) | 14.9 / 18 |
Other elements in 6dpc:
The structure of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C also contains other interesting chemical elements:
| Manganese | (Mn) | 5 atoms |
| Iodine | (I) | 4 atoms |
Potassium Binding Sites:
The binding sites of Potassium atom in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C
(pdb code 6dpc). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 3 binding sites of Potassium where determined in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C, PDB code: 6dpc:
Jump to Potassium binding site number: 1; 2; 3;
In total 3 binding sites of Potassium where determined in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C, PDB code: 6dpc:
Jump to Potassium binding site number: 1; 2; 3;
Potassium binding site 1 out of 3 in 6dpc
Go back to
Potassium Binding Sites List in 6dpc
Potassium binding site 1 out
of 3 in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C
Mono view
Stereo pair view
Mono view
Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C within 5.0Å range:
|
Potassium binding site 2 out of 3 in 6dpc
Go back to
Potassium Binding Sites List in 6dpc
Potassium binding site 2 out
of 3 in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C
Mono view
Stereo pair view
Mono view
Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C within 5.0Å range:
|
Potassium binding site 3 out of 3 in 6dpc
Go back to
Potassium Binding Sites List in 6dpc
Potassium binding site 3 out
of 3 in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C
Mono view
Stereo pair view
Mono view
Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 3 of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 12 Mm MN2+ and 200 Mm K+ For 40 S at 21 C within 5.0Å range:
|
Reference:
N.L.Samara,
W.Yang.
Cation Trafficking Propels Rna Hydrolysis. Nat. Struct. Mol. Biol. V. 25 715 2018.
ISSN: ESSN 1545-9985
PubMed: 30076410
DOI: 10.1038/S41594-018-0099-4
Page generated: Mon Aug 12 15:52:52 2024
ISSN: ESSN 1545-9985
PubMed: 30076410
DOI: 10.1038/S41594-018-0099-4
Last articles
Zn in 9MJ5Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF