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Potassium in PDB 5wnn: Crystal Structure of Phosphate-Binding Protein Psts Protein From Burkholderia Pseudomallei

Protein crystallography data

The structure of Crystal Structure of Phosphate-Binding Protein Psts Protein From Burkholderia Pseudomallei, PDB code: 5wnn was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.34 / 1.85
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 116.640, 59.840, 101.090, 90.00, 120.97, 90.00
R / Rfree (%) 17 / 21.8

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of Phosphate-Binding Protein Psts Protein From Burkholderia Pseudomallei (pdb code 5wnn). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Crystal Structure of Phosphate-Binding Protein Psts Protein From Burkholderia Pseudomallei, PDB code: 5wnn:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 5wnn

Go back to Potassium Binding Sites List in 5wnn
Potassium binding site 1 out of 2 in the Crystal Structure of Phosphate-Binding Protein Psts Protein From Burkholderia Pseudomallei


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Phosphate-Binding Protein Psts Protein From Burkholderia Pseudomallei within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K401

b:20.7
occ:0.50
O A:VAL143 2.6 31.2 1.0
O A:HOH581 2.8 23.6 0.5
O A:PRO141 3.0 27.5 1.0
O A:ASN140 3.0 23.5 1.0
C A:PRO141 3.5 28.9 1.0
C A:VAL143 3.7 31.1 1.0
CA A:PRO141 3.8 26.3 1.0
C A:ASN140 4.1 23.4 1.0
N A:VAL143 4.1 24.8 1.0
N A:LYS142 4.4 26.4 1.0
N A:PRO141 4.4 24.8 1.0
CA A:VAL143 4.5 29.3 1.0
C A:LYS142 4.6 26.7 1.0
N A:LYS144 4.7 28.0 1.0
CA A:LYS144 4.8 28.6 1.0
N A:LEU145 4.9 25.0 1.0
CA A:LYS142 5.0 29.5 1.0

Potassium binding site 2 out of 2 in 5wnn

Go back to Potassium Binding Sites List in 5wnn
Potassium binding site 2 out of 2 in the Crystal Structure of Phosphate-Binding Protein Psts Protein From Burkholderia Pseudomallei


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of Phosphate-Binding Protein Psts Protein From Burkholderia Pseudomallei within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K401

b:21.0
occ:0.50
O B:VAL143 2.7 27.3 1.0
O B:HOH534 2.8 22.9 0.3
O B:PRO141 3.0 29.0 1.0
O B:ASN140 3.0 26.7 1.0
C B:PRO141 3.6 34.8 1.0
C B:VAL143 3.8 25.7 1.0
CA B:PRO141 3.8 27.6 1.0
C B:ASN140 4.1 24.7 1.0
N B:VAL143 4.2 26.3 1.0
N B:PRO141 4.5 26.2 1.0
N B:LYS142 4.5 28.1 1.0
CA B:VAL143 4.6 25.5 1.0
C B:LYS142 4.7 28.2 1.0
N B:LYS144 4.8 31.8 1.0
CA B:LYS144 4.9 34.8 1.0
N B:LEU145 5.0 24.7 1.0

Reference:

J.Abendroth, D.M.Dranow, D.D.Lorimer, T.E.Edwards. Crystal Structure of Phosphate-Binding Protein Psts Protein From Burkholderia Pseudomallei To Be Published.
Page generated: Sat Aug 9 10:06:29 2025

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