Potassium in PDB 5vdn: 1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase From Yersinia Pestis in Complex with Fad

All present enzymatic activity of 1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase From Yersinia Pestis in Complex with Fad:
1.8.1.7;

The structure of 1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase From Yersinia Pestis in Complex with Fad, PDB code: 5vdn was solved by G.Minasov, L.Shuvalova, I.Dubrovska, A.Cardona-Correa, S.Grimshaw, K.Kwon, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.94 / 1.55
Space group	P 64
Cell size a, b, c (Å), α, β, γ (°)	125.844, 125.844, 124.557, 90.00, 90.00, 120.00
R / Rfree (%)	14.5 / 16.5

The binding sites of Potassium atom in the 1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase From Yersinia Pestis in Complex with Fad (pdb code 5vdn). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the 1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase From Yersinia Pestis in Complex with Fad, PDB code: 5vdn:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in the 1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase From Yersinia Pestis in Complex with Fad


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of 1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase From Yersinia Pestis in Complex with Fad within 5.0Å range: probe atom residue distance (Å) B Occ A:K501 b:24.6 occ:0.90 O A:VAL457 2.6 16.6 1.0 O A:THR445 2.7 16.2 1.0 O A:HOH1080 2.8 28.4 1.0 O A:HOH1059 2.8 26.5 1.0 O A:HOH983 2.9 17.0 0.5 O A:ASP443 2.9 20.6 1.0 O A:PHE442 3.3 17.6 1.0 C A:ASP443 3.6 20.1 1.0 O A:HOH979 3.7 17.9 1.0 C A:VAL457 3.7 15.1 1.0 CA A:ASP443 3.8 20.0 1.0 C A:THR445 3.8 15.2 1.0 O B:HOH1165 3.9 31.0 1.0 CB A:VAL457 3.9 15.4 1.0 O A:HOH942 4.0 29.8 0.7 CG2 A:VAL457 4.1 15.0 1.0 C A:PHE442 4.2 16.7 1.0 N A:THR445 4.3 16.5 1.0 O A:HOH624 4.3 28.3 1.0 O A:HOH1004 4.3 27.8 1.0 CA A:VAL457 4.4 15.0 1.0 CG2 A:THR458 4.4 17.5 0.5 N A:ASP443 4.5 17.8 1.0 N A:ASN444 4.6 19.7 1.0 CA A:THR445 4.6 15.9 1.0 O B:HOH997 4.7 32.4 1.0 N A:THR458 4.7 15.5 0.5 N A:THR458 4.7 14.8 0.5 N A:VAL446 4.7 14.3 1.0 CA A:VAL446 4.8 14.1 1.0 CA A:THR458 4.9 16.4 0.5 N A:ALA447 4.9 13.6 1.0 CA A:THR458 4.9 15.3 0.5 C A:ASN444 5.0 19.5 1.0

Potassium binding site 2 out of 2 in the 1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase From Yersinia Pestis in Complex with Fad


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of 1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase From Yersinia Pestis in Complex with Fad within 5.0Å range: probe atom residue distance (Å) B Occ B:K501 b:25.0 occ:0.90 O B:VAL457 2.6 16.8 1.0 O B:THR445 2.7 15.9 1.0 O B:HOH990 2.8 17.9 0.5 O B:HOH1063 2.8 27.1 1.0 O B:HOH1097 2.8 27.7 1.0 O B:ASP443 2.9 20.7 1.0 O B:PHE442 3.3 17.9 1.0 C B:ASP443 3.6 20.2 1.0 O B:HOH991 3.7 17.8 1.0 C B:VAL457 3.7 15.3 1.0 CA B:ASP443 3.8 20.1 1.0 C B:THR445 3.8 14.7 1.0 O B:HOH1172 3.9 31.5 1.0 CB B:VAL457 3.9 15.4 1.0 CG2 B:VAL457 4.1 14.9 1.0 O B:HOH995 4.1 29.8 0.7 C B:PHE442 4.2 16.8 1.0 N B:THR445 4.3 16.4 1.0 O B:HOH626 4.3 29.6 1.0 O B:HOH1027 4.4 27.6 1.0 CA B:VAL457 4.4 15.3 1.0 N B:ASP443 4.5 17.8 1.0 CG2 B:THR458 4.5 17.1 0.5 N B:ASN444 4.6 19.9 1.0 CA B:THR445 4.6 15.9 1.0 O A:HOH1002 4.7 30.3 1.0 N B:VAL446 4.7 14.2 1.0 N B:THR458 4.7 15.4 0.5 N B:THR458 4.7 15.0 0.5 CA B:VAL446 4.8 14.2 1.0 CA B:THR458 4.9 16.4 0.5 N B:ALA447 4.9 13.4 1.0 CA B:THR458 4.9 15.6 0.5 C B:ASN444 5.0 19.2 1.0

G.Minasov, L.Shuvalova, I.Dubrovska, A.Cardona-Correa, S.Grimshaw, K.Kwon, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase From Yersinia Pestis in Complex with Fad. To Be Published.