Atomistry » Potassium » PDB 5mrm-5s9l » 5pa3
Atomistry »
  Potassium »
    PDB 5mrm-5s9l »
      5pa3 »

Potassium in PDB 5pa3: Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One

Enzymatic activity of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One

All present enzymatic activity of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One:
2.1.1.6;

Protein crystallography data

The structure of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One, PDB code: 5pa3 was solved by A.Ehler, C.Lerner, M.G.Rudolph, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.64 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 49.577, 53.503, 80.997, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 20.8

Other elements in 5pa3:

The structure of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Chlorine (Cl) 1 atom

Potassium Binding Sites:

The binding sites of Potassium atom in the Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One (pdb code 5pa3). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One, PDB code: 5pa3:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 5pa3

Go back to Potassium Binding Sites List in 5pa3
Potassium binding site 1 out of 2 in the Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K305

b:21.4
occ:1.00
O A:PHE189 2.5 23.3 1.0
O A:SER186 2.6 17.8 1.0
O A:HOH577 2.7 35.3 1.0
O A:ARG184 2.8 20.6 1.0
O A:VAL183 2.8 16.6 1.0
O A:HOH564 2.8 19.8 1.0
C A:ARG184 3.4 18.3 1.0
C A:SER186 3.6 18.6 1.0
C A:PHE189 3.7 21.1 1.0
N A:SER186 3.8 18.0 1.0
CA A:ARG184 3.9 17.6 1.0
C A:VAL183 3.9 15.5 1.0
N A:GLY185 4.2 19.9 1.0
C A:GLY185 4.3 21.4 1.0
CA A:SER186 4.3 17.3 1.0
N A:ARG184 4.4 16.7 1.0
SG A:CYS191 4.4 20.7 1.0
CA A:PHE189 4.5 18.2 1.0
N A:SER187 4.6 19.2 1.0
CB A:PHE189 4.6 17.1 1.0
N A:PHE189 4.6 17.8 1.0
CA A:GLY185 4.6 19.1 1.0
N A:GLU190 4.7 20.1 1.0
CA A:GLU190 4.7 21.8 1.0
CA A:SER187 4.8 20.9 1.0
N A:CYS191 4.9 17.7 1.0
CB A:SER186 4.9 18.0 1.0
O A:GLY185 4.9 21.9 1.0

Potassium binding site 2 out of 2 in 5pa3

Go back to Potassium Binding Sites List in 5pa3
Potassium binding site 2 out of 2 in the Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K306

b:33.7
occ:1.00
O A:SER58 2.6 17.8 1.0
O A:HOH500 2.7 34.6 1.0
OG A:SER60 2.7 23.1 1.0
O A:HOH552 2.9 23.3 1.0
O A:HOH566 3.2 31.3 1.0
N A:SER60 3.6 17.5 1.0
C A:SER58 3.8 16.5 1.0
CB A:SER60 3.9 19.8 1.0
C A:PRO59 4.1 16.8 1.0
CA A:SER60 4.2 17.0 1.0
CA A:PRO59 4.4 16.9 1.0
O A:HOH505 4.6 26.7 1.0
N A:PRO59 4.6 16.7 1.0
CB A:SER58 4.6 17.4 0.5
O A:HOH429 4.6 24.9 1.0
OG A:SER58 4.6 19.8 0.5
CB A:SER58 4.7 18.5 0.5
O A:PRO59 4.7 16.5 1.0
O A:TYR57 4.7 18.1 1.0
CA A:SER58 4.9 16.8 0.5
CA A:SER58 4.9 17.3 0.5

Reference:

C.Lerner, R.Jakob-Roetne, K.Groebke-Zbinden, B.Buettelmann, M.G.Rudolph. Crystal Structure of A Comt Complex To Be Published.
Page generated: Sat Aug 9 09:38:41 2025

Last articles

Na in 3CC9
Na in 3CBC
Na in 3CBT
Na in 3C9F
Na in 3CB8
Na in 3C7O
Na in 3C88
Na in 3C7X
Na in 3C7T
Na in 3C87
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy