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Potassium in PDB 5co0: Crystal Structure of the MTERF1 Y288A Substitution Bound to the Termination Sequence.

Protein crystallography data

The structure of Crystal Structure of the MTERF1 Y288A Substitution Bound to the Termination Sequence., PDB code: 5co0 was solved by J.Byrnes, K.Hauser, L.Norona, E.Mejia, C.Simmerling, M.Garcia-Diaz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 80.26 / 2.65
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 87.537, 90.440, 160.514, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 26.4

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of the MTERF1 Y288A Substitution Bound to the Termination Sequence. (pdb code 5co0). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Structure of the MTERF1 Y288A Substitution Bound to the Termination Sequence., PDB code: 5co0:

Potassium binding site 1 out of 1 in 5co0

Go back to Potassium Binding Sites List in 5co0
Potassium binding site 1 out of 1 in the Crystal Structure of the MTERF1 Y288A Substitution Bound to the Termination Sequence.


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of the MTERF1 Y288A Substitution Bound to the Termination Sequence. within 5.0Å range:
probe atom residue distance (Å) B Occ
E:K101

b:0.3
occ:1.00
NH1 O:ARG99 3.8 71.0 1.0
OP1 E:DG4 4.2 87.0 1.0
O4' E:DA3 4.6 87.0 1.0
C4' E:DA3 4.6 80.1 1.0
CZ O:ARG99 4.9 80.7 1.0
C5' E:DG4 4.9 65.6 1.0

Reference:

J.Byrnes, K.Hauser, L.Norona, E.Mejia, C.Simmerling, M.Garcia-Diaz. Base Flipping By MTERF1 Can Accommodate Multiple Conformations and Occurs in A Stepwise Fashion. J.Mol.Biol. V. 428 2542 2016.
ISSN: ESSN 1089-8638
PubMed: 26523681
DOI: 10.1016/J.JMB.2015.10.021
Page generated: Sat Aug 9 08:41:06 2025

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