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Potassium in PDB 4qav: The Structure of Beta-Ketoacyl -(Acyl Carrier Protein) Synthase II (Fabf) From Neisseria Meningitidis

Enzymatic activity of The Structure of Beta-Ketoacyl -(Acyl Carrier Protein) Synthase II (Fabf) From Neisseria Meningitidis

All present enzymatic activity of The Structure of Beta-Ketoacyl -(Acyl Carrier Protein) Synthase II (Fabf) From Neisseria Meningitidis:
2.3.1.179;

Protein crystallography data

The structure of The Structure of Beta-Ketoacyl -(Acyl Carrier Protein) Synthase II (Fabf) From Neisseria Meningitidis, PDB code: 4qav was solved by J.D.Nanson, J.K.Forwood, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.24 / 2.10
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 153.489, 153.489, 66.470, 90.00, 90.00, 120.00
R / Rfree (%) 17.3 / 19.6

Potassium Binding Sites:

The binding sites of Potassium atom in the The Structure of Beta-Ketoacyl -(Acyl Carrier Protein) Synthase II (Fabf) From Neisseria Meningitidis (pdb code 4qav). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the The Structure of Beta-Ketoacyl -(Acyl Carrier Protein) Synthase II (Fabf) From Neisseria Meningitidis, PDB code: 4qav:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 4qav

Go back to Potassium Binding Sites List in 4qav
Potassium binding site 1 out of 2 in the The Structure of Beta-Ketoacyl -(Acyl Carrier Protein) Synthase II (Fabf) From Neisseria Meningitidis


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of The Structure of Beta-Ketoacyl -(Acyl Carrier Protein) Synthase II (Fabf) From Neisseria Meningitidis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K501

b:22.9
occ:1.00
OD1 A:ASN301 2.7 22.9 1.0
O A:ASN397 2.7 17.6 1.0
OE1 A:GLU349 2.7 18.7 1.0
O A:ASN301 2.8 20.1 1.0
OG A:SER396 2.8 20.5 1.0
O A:ALA302 2.9 17.3 1.0
O A:HOH622 3.4 26.8 1.0
N A:ASN397 3.5 24.4 1.0
C A:ALA302 3.5 21.7 1.0
C A:ASN301 3.6 23.6 1.0
C A:ASN397 3.7 21.5 1.0
CD A:GLU349 3.7 19.2 1.0
CG A:ASN301 3.7 25.5 1.0
CB A:GLU349 3.8 17.4 1.0
CB A:SER396 4.0 23.4 1.0
C A:SER396 4.0 22.3 1.0
CA A:ASN397 4.1 21.3 1.0
N A:HIS303 4.1 17.6 1.0
CG A:GLU349 4.1 15.8 1.0
CB A:ASN301 4.1 24.2 1.0
N A:ALA302 4.2 23.6 1.0
CA A:SER396 4.2 24.0 1.0
O A:HOH618 4.2 15.5 1.0
CA A:ALA302 4.3 23.0 1.0
CA A:HIS303 4.4 22.3 1.0
OG A:SER398 4.5 27.4 1.0
CA A:ASN301 4.5 24.6 1.0
NZ A:LYS335 4.6 18.3 1.0
O A:HOH643 4.6 16.2 1.0
OE2 A:GLU349 4.7 19.0 1.0
N A:SER398 4.8 20.8 1.0
ND2 A:ASN301 4.9 18.5 1.0
O A:SER396 4.9 19.9 1.0
CB A:ASN397 4.9 26.2 1.0
O A:HOH656 5.0 26.7 1.0

Potassium binding site 2 out of 2 in 4qav

Go back to Potassium Binding Sites List in 4qav
Potassium binding site 2 out of 2 in the The Structure of Beta-Ketoacyl -(Acyl Carrier Protein) Synthase II (Fabf) From Neisseria Meningitidis


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of The Structure of Beta-Ketoacyl -(Acyl Carrier Protein) Synthase II (Fabf) From Neisseria Meningitidis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K501

b:21.9
occ:1.00
OE1 B:GLU349 2.7 28.6 1.0
O B:ASN397 2.7 21.3 1.0
OD1 B:ASN301 2.8 33.7 1.0
O B:ASN301 2.8 26.7 1.0
OG B:SER396 2.9 26.0 1.0
O B:ALA302 2.9 28.9 1.0
O B:HOH641 3.4 32.1 1.0
N B:ASN397 3.4 23.5 1.0
C B:ASN301 3.5 29.9 1.0
C B:ALA302 3.6 30.3 1.0
C B:ASN397 3.7 25.4 1.0
CD B:GLU349 3.7 32.4 1.0
CG B:ASN301 3.8 35.6 1.0
CB B:GLU349 3.9 24.2 1.0
CB B:SER396 4.0 27.7 1.0
C B:SER396 4.0 24.9 1.0
CB B:ASN301 4.1 34.9 1.0
CA B:ASN397 4.1 23.5 1.0
N B:ALA302 4.1 25.3 1.0
CA B:SER396 4.2 26.9 1.0
N B:HIS303 4.2 22.4 1.0
CG B:GLU349 4.2 23.4 1.0
O B:HOH610 4.2 22.4 1.0
CA B:ALA302 4.3 29.6 1.0
CA B:ASN301 4.4 31.3 1.0
OG B:SER398 4.5 36.1 1.0
O B:HOH643 4.5 29.1 1.0
CA B:HIS303 4.6 24.1 1.0
O B:HOH680 4.6 34.8 1.0
OE2 B:GLU349 4.7 31.2 1.0
NZ B:LYS335 4.8 26.6 1.0
N B:SER398 4.8 27.3 1.0
O B:SER396 4.9 24.0 1.0
CB B:ASN397 5.0 24.4 1.0
ND2 B:ASN301 5.0 33.9 1.0

Reference:

J.D.Nanson, J.K.Forwood. The Structure of Beta-Ketoacyl -(Acyl Carrier Protein) Synthase II (Fabf) From Neisseria Meningitidis To Be Published.
Page generated: Sat Aug 9 07:41:50 2025

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