Potassium in PDB 4lca: Crystal Structure of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Complexed with Thymidine

The structure of Crystal Structure of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Complexed with Thymidine, PDB code: 4lca was solved by V.N.Malashkevich, R.Bhosle, R.Toro, B.Hillerich, A.Gizzi, S.Garforth, A.Kar, M.K.Chan, J.Lafluer, H.Patel, B.Matikainen, S.Chamala, S.Lim, A.Celikgil, G.Villegas, B.Evans, J.Love, A.Fiser, K.Khafizov, R.Seidel, J.B.Bonanno, S.C.Almo, New York Structural Genomics Researchconsortium (Nysgrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.18 / 1.50
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	51.525, 80.777, 82.663, 90.00, 98.09, 90.00
R / Rfree (%)	20 / 24.8

The binding sites of Potassium atom in the Crystal Structure of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Complexed with Thymidine (pdb code 4lca). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Crystal Structure of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Complexed with Thymidine, PDB code: 4lca:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in the Crystal Structure of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Complexed with Thymidine


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Complexed with Thymidine within 5.0Å range: probe atom residue distance (Å) B Occ A:K405 b:45.3 occ:1.00 O A:VAL306 2.7 20.5 1.0 O A:GLN309 2.7 25.9 1.0 O A:ASP270 2.8 19.6 1.0 O A:GLY311 2.8 24.9 1.0 O A:THR272 2.9 18.2 1.0 OD2 A:ASP270 3.7 31.1 1.0 C A:VAL306 3.7 18.1 1.0 C A:GLY311 3.7 24.1 1.0 CG A:ASP270 3.8 23.1 1.0 C A:ASP270 3.8 16.4 1.0 C A:GLN309 3.9 23.2 1.0 C A:THR272 4.0 16.7 1.0 CB A:ASP270 4.0 21.5 1.0 N A:GLY311 4.0 30.6 1.0 N A:THR272 4.1 19.1 1.0 CG2 A:VAL306 4.2 17.1 1.0 CA A:ILE307 4.2 18.9 1.0 OD1 A:ASP270 4.3 21.0 1.0 CA A:THR272 4.3 17.2 1.0 CG A:GLN309 4.4 24.5 1.0 CB A:THR272 4.4 17.0 1.0 N A:ILE307 4.4 19.7 1.0 CA A:ASP270 4.4 22.5 1.0 C A:ILE310 4.5 28.9 1.0 CA A:PRO312 4.5 19.3 1.0 CA A:GLY311 4.5 27.3 1.0 N A:PRO312 4.5 21.8 1.0 C A:THR271 4.6 18.7 1.0 CA A:ILE310 4.6 28.8 1.0 N A:GLN309 4.7 23.3 1.0 C A:ILE307 4.7 19.4 1.0 N A:ILE310 4.7 28.4 1.0 CA A:VAL306 4.7 18.4 1.0 N A:THR271 4.8 16.6 1.0 CA A:GLN309 4.8 21.2 1.0 CB A:VAL306 4.8 16.1 1.0 CG1 A:VAL306 4.9 18.5 1.0 NE2 A:GLN309 4.9 23.7 1.0 N A:ASP270 5.0 24.9 1.0

Potassium binding site 2 out of 2 in the Crystal Structure of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Complexed with Thymidine


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Complexed with Thymidine within 5.0Å range: probe atom residue distance (Å) B Occ B:K406 b:44.6 occ:1.00 O B:VAL306 2.8 21.7 1.0 O B:GLN309 2.8 24.0 1.0 O B:ASP270 2.8 19.3 1.0 O B:THR272 2.9 15.6 1.0 O B:GLY311 2.9 22.6 1.0 C B:GLY311 3.7 23.4 1.0 C B:VAL306 3.8 17.9 1.0 OD2 B:ASP270 3.8 30.9 1.0 CG B:ASP270 3.8 22.9 1.0 C B:ASP270 3.8 16.7 1.0 N B:GLY311 3.9 30.9 1.0 C B:THR272 3.9 15.1 1.0 C B:GLN309 4.0 24.7 1.0 CB B:ASP270 4.0 23.2 1.0 N B:THR272 4.0 15.7 1.0 CG2 B:VAL306 4.1 17.2 1.0 OD1 B:ASP270 4.2 21.6 1.0 CA B:ILE307 4.3 17.9 1.0 CA B:THR272 4.3 15.8 1.0 CB B:THR272 4.4 16.4 1.0 CA B:GLY311 4.4 28.6 1.0 CG B:GLN309 4.4 22.6 1.0 C B:ILE310 4.4 27.7 1.0 N B:ILE307 4.5 17.3 1.0 CA B:PRO312 4.5 16.7 1.0 CA B:ASP270 4.5 24.4 1.0 N B:PRO312 4.5 18.1 1.0 C B:THR271 4.5 16.9 1.0 CA B:ILE310 4.7 26.5 1.0 CA B:VAL306 4.7 16.4 1.0 C B:ILE307 4.7 18.6 1.0 N B:THR271 4.7 17.9 1.0 N B:GLN309 4.7 22.7 1.0 N B:ILE310 4.8 28.0 1.0 CB B:VAL306 4.8 16.3 1.0 NE2 B:GLN309 4.9 24.7 1.0 CG1 B:VAL306 4.9 16.8 1.0 CA B:GLN309 4.9 24.2 1.0 CA B:THR271 5.0 18.9 1.0 O B:ILE307 5.0 21.5 1.0

V.N.Malashkevich, R.Bhosle, R.Toro, B.Hillerich, A.Gizzi, S.Garforth, A.Kar, M.K.Chan, J.Lafluer, H.Patel, B.Matikainen, S.Chamala, S.Lim, A.Celikgil, G.Villegas, B.Evans, J.Love, A.Fiser, K.Khafizov, R.Seidel, J.B.Bonanno, S.C.Almo. Crystal Structure of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Complexed with Thymidine To Be Published.