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Potassium in PDB 4esk: Crystal Structure of A Strand-Swapped Dimer of Mouse Leukocyte- Associated Immunoglobulin-Like Receptor 1 (Nysgrc-006047)Ig-Like Domain

Protein crystallography data

The structure of Crystal Structure of A Strand-Swapped Dimer of Mouse Leukocyte- Associated Immunoglobulin-Like Receptor 1 (Nysgrc-006047)Ig-Like Domain, PDB code: 4esk was solved by P.Sampathkumar, S.C.Almo, New York Structural Genomics Researchconsortium (Nysgrc), Atoms-To-Animals: The Immune Function Network(Ifn), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.51 / 1.76
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 62.141, 73.121, 90.609, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 21.6

Other elements in 4esk:

The structure of Crystal Structure of A Strand-Swapped Dimer of Mouse Leukocyte- Associated Immunoglobulin-Like Receptor 1 (Nysgrc-006047)Ig-Like Domain also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of A Strand-Swapped Dimer of Mouse Leukocyte- Associated Immunoglobulin-Like Receptor 1 (Nysgrc-006047)Ig-Like Domain (pdb code 4esk). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Structure of A Strand-Swapped Dimer of Mouse Leukocyte- Associated Immunoglobulin-Like Receptor 1 (Nysgrc-006047)Ig-Like Domain, PDB code: 4esk:

Potassium binding site 1 out of 1 in 4esk

Go back to Potassium Binding Sites List in 4esk
Potassium binding site 1 out of 1 in the Crystal Structure of A Strand-Swapped Dimer of Mouse Leukocyte- Associated Immunoglobulin-Like Receptor 1 (Nysgrc-006047)Ig-Like Domain


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of A Strand-Swapped Dimer of Mouse Leukocyte- Associated Immunoglobulin-Like Receptor 1 (Nysgrc-006047)Ig-Like Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K202

b:24.1
occ:1.00
O B:LYS79 2.5 14.0 1.0
OD1 B:ASP82 2.6 13.9 1.0
O B:GLU76 2.9 17.8 1.0
OD2 B:ASP82 2.9 14.6 1.0
O B:GLU81 3.0 12.8 1.0
CG B:ASP82 3.0 14.2 1.0
OH B:TYR51 3.3 18.8 1.0
C B:GLU76 3.6 17.8 1.0
C B:GLU81 3.6 12.7 1.0
C B:LYS79 3.6 14.1 1.0
CE2 B:TYR51 3.7 19.5 1.0
N B:GLU81 3.8 13.2 1.0
CZ B:TYR51 3.9 20.0 1.0
C B:THR80 3.9 14.4 1.0
N B:GLU76 4.0 16.9 1.0
CA B:THR80 4.2 14.0 1.0
CA B:PRO77 4.2 15.9 1.0
CA B:GLU81 4.3 12.9 1.0
N B:THR80 4.3 13.9 1.0
N B:PRO77 4.3 16.1 1.0
N B:ASP82 4.3 12.2 1.0
CA B:GLU76 4.4 18.4 1.0
CB B:ASP82 4.4 13.1 1.0
O B:THR80 4.4 16.6 1.0
CB B:THR75 4.4 15.6 1.0
CG B:LYS79 4.5 15.4 1.0
CA B:ASP82 4.7 13.1 1.0
CA B:LYS79 4.7 14.3 1.0
N B:LYS79 4.7 13.8 1.0
C B:PRO77 4.7 14.4 1.0
CB B:GLU76 4.8 22.0 1.0
CD2 B:TYR51 4.8 19.4 1.0
OH B:TYR101 4.9 12.6 1.0
C B:THR75 4.9 16.0 1.0
CA B:THR75 4.9 14.8 1.0
O B:HOH316 4.9 19.7 1.0

Reference:

P.Sampathkumar, J.Bonanno, A.Fiser, Y.Patskovsky, W.Zencheck, S.G.Nathenson, S.C.Almo. Crystal Structure of A Strand-Swapped Dimer of Mouse Leukocyte-Associated Immunoglobulin-Like Receptor 1 Ig-Like Domain To Be Published.
Page generated: Mon Aug 12 10:40:42 2024

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