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Potassium in PDB 3sog: Crystal Structure of the Bar Domain of Human Amphiphysin, Isoform 1

Protein crystallography data

The structure of Crystal Structure of the Bar Domain of Human Amphiphysin, Isoform 1, PDB code: 3sog was solved by C.K.Allerston, T.Krojer, A.Chaikuad, C.D.O.Cooper, G.Berridge, P.Savitsky, M.Vollmar, F.Von Delft, C.H.Arrowsmith, J.Weigelt, A.Edwards, C.Bountra, O.Gileadi, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.07 / 2.30
Space group P 31 1 2
Cell size a, b, c (Å), α, β, γ (°) 56.710, 56.710, 164.790, 90.00, 90.00, 120.00
R / Rfree (%) 23.9 / 26.6

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of the Bar Domain of Human Amphiphysin, Isoform 1 (pdb code 3sog). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Crystal Structure of the Bar Domain of Human Amphiphysin, Isoform 1, PDB code: 3sog:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 3sog

Go back to Potassium Binding Sites List in 3sog
Potassium binding site 1 out of 2 in the Crystal Structure of the Bar Domain of Human Amphiphysin, Isoform 1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of the Bar Domain of Human Amphiphysin, Isoform 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K237

b:0.6
occ:1.00
OE2 A:GLU213 3.2 72.4 1.0
OE1 A:GLU213 3.5 65.4 1.0
CD A:GLU213 3.7 82.6 1.0
CG1 A:VAL209 4.3 65.8 1.0
CD1 A:PHE206 4.8 79.6 1.0
CE1 A:PHE206 4.8 80.5 1.0

Potassium binding site 2 out of 2 in 3sog

Go back to Potassium Binding Sites List in 3sog
Potassium binding site 2 out of 2 in the Crystal Structure of the Bar Domain of Human Amphiphysin, Isoform 1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of the Bar Domain of Human Amphiphysin, Isoform 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K238

b:0.2
occ:1.00
OE1 A:GLU72 3.5 76.6 1.0
NE2 A:GLN71 3.6 62.3 1.0
OE2 A:GLU72 3.8 92.8 1.0
OD2 A:ASP103 3.8 78.1 1.0
OD1 A:ASP103 3.9 72.1 1.0
CD A:GLU72 4.0 93.5 1.0
OE2 A:GLU107 4.1 75.4 1.0
SD A:MET75 4.2 76.6 1.0
CG A:ASP103 4.3 72.9 1.0
CD A:GLN71 4.3 57.7 1.0
CG A:GLN71 4.8 46.6 1.0
OE1 A:GLN71 4.9 52.7 1.0

Reference:

C.K.Allerston, T.Krojer, A.Chaikuad, C.D.O.Cooper, G.Berridge, P.Savitsky, M.Vollmar, F.Von Delft, C.H.Arrowsmith, J.Weigelt, A.Edwards, C.Bountra, O.Gileadi, Structural Genomics Consortium (Sgc). N/A N/A.
Page generated: Sat Aug 9 05:51:07 2025

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