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Potassium in PDB 3pp9: 1.6 Angstrom Resolution Crystal Structure of Putative Streptothricin Acetyltransferase From Bacillus Anthracis Str. Ames in Complex with Acetyl Coenzyme A

Protein crystallography data

The structure of 1.6 Angstrom Resolution Crystal Structure of Putative Streptothricin Acetyltransferase From Bacillus Anthracis Str. Ames in Complex with Acetyl Coenzyme A, PDB code: 3pp9 was solved by A.S.Halavaty, Z.Wawrzak, O.Onopriyenko, A.Edwards, A.Savchenko, S.Peterson, W.F.Anderson, Center For Structural Genomics Of Infectiousdiseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.28 / 1.60
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 47.097, 68.009, 174.168, 90.00, 97.61, 90.00
R / Rfree (%) 18.9 / 22.2

Potassium Binding Sites:

The binding sites of Potassium atom in the 1.6 Angstrom Resolution Crystal Structure of Putative Streptothricin Acetyltransferase From Bacillus Anthracis Str. Ames in Complex with Acetyl Coenzyme A (pdb code 3pp9). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the 1.6 Angstrom Resolution Crystal Structure of Putative Streptothricin Acetyltransferase From Bacillus Anthracis Str. Ames in Complex with Acetyl Coenzyme A, PDB code: 3pp9:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 3pp9

Go back to Potassium Binding Sites List in 3pp9
Potassium binding site 1 out of 2 in the 1.6 Angstrom Resolution Crystal Structure of Putative Streptothricin Acetyltransferase From Bacillus Anthracis Str. Ames in Complex with Acetyl Coenzyme A


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of 1.6 Angstrom Resolution Crystal Structure of Putative Streptothricin Acetyltransferase From Bacillus Anthracis Str. Ames in Complex with Acetyl Coenzyme A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K187

b:26.4
occ:1.00
O A:HOH205 2.9 31.2 1.0
OG1 A:THR138 3.0 15.2 0.5
ND2 A:ASN142 3.3 13.9 1.0
O A:HOH209 3.3 18.9 1.0
N A:GLN139 3.4 15.3 1.0
CB A:ASN142 3.7 13.1 1.0
O A:HOH206 3.7 35.9 1.0
CE1 A:TYR54 3.8 27.4 1.0
CA A:THR138 3.9 14.3 0.5
CB A:THR138 4.0 14.0 0.5
CD1 A:TYR54 4.0 26.4 1.0
CG A:ASN142 4.0 12.2 1.0
CA A:THR138 4.1 13.6 0.5
CB A:GLN139 4.1 18.9 1.0
C A:THR138 4.1 14.8 0.5
CG A:GLN139 4.2 23.3 1.0
S1P A:ACO185 4.2 20.0 1.0
C A:THR138 4.2 15.1 0.5
C2P A:ACO185 4.2 20.0 1.0
CA A:GLN139 4.3 17.1 1.0
CB A:THR138 4.4 13.9 0.5
O A:GLN139 4.7 15.9 1.0
CZ A:PHE23 4.7 20.4 1.0
O A:HOH342 4.8 33.8 1.0
CD A:GLN139 4.9 30.2 1.0

Potassium binding site 2 out of 2 in 3pp9

Go back to Potassium Binding Sites List in 3pp9
Potassium binding site 2 out of 2 in the 1.6 Angstrom Resolution Crystal Structure of Putative Streptothricin Acetyltransferase From Bacillus Anthracis Str. Ames in Complex with Acetyl Coenzyme A


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of 1.6 Angstrom Resolution Crystal Structure of Putative Streptothricin Acetyltransferase From Bacillus Anthracis Str. Ames in Complex with Acetyl Coenzyme A within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K188

b:41.4
occ:1.00
NE2 C:GLN139 2.4 24.1 0.5
OG1 C:THR138 2.8 20.2 0.5
ND2 C:ASN142 3.2 20.6 1.0
CD C:GLN139 3.2 23.6 0.5
OE1 C:GLN139 3.5 26.2 0.5
N C:GLN139 3.7 21.7 0.5
CE1 C:TYR54 3.7 37.4 1.0
CD1 C:TYR54 3.7 38.9 1.0
CB C:ASN142 3.7 19.2 1.0
N C:GLN139 3.7 20.3 0.5
O C:HOH207 3.8 14.6 1.0
CB C:THR138 3.9 19.1 0.5
CG C:ASN142 3.9 19.7 1.0
CA C:THR138 4.0 19.8 0.5
CA C:THR138 4.1 18.7 0.5
S1P C:ACO185 4.2 25.9 0.9
C2P C:ACO185 4.2 25.6 0.9
CG C:GLN139 4.3 26.5 0.5
CB C:THR138 4.3 18.6 0.5
C C:THR138 4.3 19.1 0.5
CB C:GLN139 4.3 23.4 0.5
OE1 C:GLN139 4.4 36.0 0.5
C C:THR138 4.4 20.5 0.5
CG C:GLN139 4.4 23.6 0.5
CD C:GLN139 4.4 31.0 0.5
CB C:GLN139 4.4 21.7 0.5
CA C:GLN139 4.6 22.3 0.5
CA C:GLN139 4.6 20.9 0.5
CZ C:PHE23 4.7 32.4 1.0
O C:GLN139 4.9 21.6 0.5
CG2 C:THR138 4.9 16.9 0.5
O C:GLN139 4.9 20.8 0.5
CZ C:TYR54 4.9 39.0 1.0
CG C:TYR54 5.0 37.7 1.0

Reference:

A.S.Halavaty, Z.Wawrzak, O.Onopriyenko, A.Edwards, A.Savchenko, S.Peterson, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.6 Angstrom Resolution Crystal Structure of Putative Streptothricin Acetyltransferase From Bacillus Anthracis Str. Ames in Complex with Acetyl Coenzyme A To Be Published.
Page generated: Mon Aug 12 09:03:38 2024

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