Potassium in PDB 3gvx: Crystal Structure of Glycerate Dehydrogenase Related Protein From Thermoplasma Acidophilum

All present enzymatic activity of Crystal Structure of Glycerate Dehydrogenase Related Protein From Thermoplasma Acidophilum:
1.1.1.2;

The structure of Crystal Structure of Glycerate Dehydrogenase Related Protein From Thermoplasma Acidophilum, PDB code: 3gvx was solved by B.Syed Ibrahim, D.Kumaran, S.K.Burley, S.Swaminathan, New Yorksgx Research Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.42 / 2.20
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	66.512, 77.842, 152.654, 90.00, 90.00, 90.00
R / Rfree (%)	24 / 26.1

The binding sites of Potassium atom in the Crystal Structure of Glycerate Dehydrogenase Related Protein From Thermoplasma Acidophilum (pdb code 3gvx). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Crystal Structure of Glycerate Dehydrogenase Related Protein From Thermoplasma Acidophilum, PDB code: 3gvx:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in the Crystal Structure of Glycerate Dehydrogenase Related Protein From Thermoplasma Acidophilum


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Glycerate Dehydrogenase Related Protein From Thermoplasma Acidophilum within 5.0Å range: probe atom residue distance (Å) B Occ A:K291 b:24.2 occ:1.00 O B:HOH296 2.7 22.1 1.0 OG1 B:THR117 2.7 28.4 1.0 O A:VAL256 2.7 17.2 1.0 ND1 A:HIS88 2.8 23.6 1.0 CG2 B:THR117 3.5 27.3 1.0 CB B:THR117 3.5 26.9 1.0 C A:VAL256 3.6 19.5 1.0 CE1 A:HIS88 3.6 20.8 1.0 CA A:ALA257 3.7 20.8 1.0 CG A:HIS88 3.7 22.8 1.0 CD B:LYS98 3.8 13.5 1.0 CB A:HIS88 3.9 20.9 1.0 O A:ALA257 4.0 18.4 1.0 C A:ALA257 4.0 20.5 1.0 N A:ALA257 4.0 20.4 1.0 CG2 A:VAL256 4.3 18.6 1.0 NZ B:LYS98 4.5 14.4 1.0 CE B:LYS98 4.6 14.8 1.0 CB A:VAL256 4.6 21.6 1.0 CB B:LYS98 4.6 18.9 1.0 CG B:LYS98 4.7 18.2 1.0 NE2 A:HIS88 4.7 20.8 1.0 CD2 A:HIS88 4.7 19.4 1.0 CA A:VAL256 4.8 18.1 1.0 CA A:HIS88 4.9 17.9 1.0 N A:GLY258 4.9 21.6 1.0 CB A:ALA257 4.9 20.4 1.0 CA B:THR117 4.9 26.1 1.0 O A:SER84 5.0 18.0 1.0

Potassium binding site 2 out of 2 in the Crystal Structure of Glycerate Dehydrogenase Related Protein From Thermoplasma Acidophilum


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of Glycerate Dehydrogenase Related Protein From Thermoplasma Acidophilum within 5.0Å range: probe atom residue distance (Å) B Occ B:K291 b:44.8 occ:1.00 O B:HOH303 2.6 34.7 1.0 ND1 B:HIS88 2.7 25.5 1.0 O B:VAL256 3.0 36.8 1.0 OG1 A:THR117 3.0 37.2 1.0 O B:ALA257 3.3 35.5 1.0 CG B:HIS88 3.3 25.3 1.0 CB B:HIS88 3.4 27.3 1.0 CA B:ALA257 3.5 38.0 1.0 CE1 B:HIS88 3.7 25.2 1.0 C B:ALA257 3.7 38.4 1.0 CG2 A:THR117 3.8 38.5 1.0 C B:VAL256 3.8 37.7 1.0 CD A:LYS98 3.8 26.0 1.0 CB A:THR117 3.8 38.5 1.0 N B:ALA257 4.0 38.0 1.0 CE A:LYS98 4.2 24.6 1.0 CA B:HIS88 4.3 27.7 1.0 CG A:LYS98 4.4 26.5 1.0 OG B:SER84 4.5 28.0 1.0 CD2 B:HIS88 4.5 24.7 1.0 O B:SER84 4.5 29.4 1.0 NE2 B:HIS88 4.6 24.6 1.0 NZ A:LYS98 4.6 27.7 1.0 CG2 B:VAL256 4.6 40.1 1.0 CB A:LYS98 4.7 27.3 1.0 CB B:ALA257 4.7 36.1 1.0 N B:HIS88 4.9 28.0 1.0 N B:GLY258 4.9 40.1 1.0 CB B:VAL256 4.9 40.1 1.0 N B:GLY259 5.0 46.4 1.0

B.Syed Ibrahim, D.Kumaran, S.K.Burley, S.Swaminathan. Crystal Structure of Glycerate Dehydrogenase Related Protein From Thermoplasma Acidophilum To Be Published.