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Potassium in PDB 3dec: Crystal Structure of A Glycosyl Hydrolases Family 2 Protein From Bacteroides Thetaiotaomicron

Protein crystallography data

The structure of Crystal Structure of A Glycosyl Hydrolases Family 2 Protein From Bacteroides Thetaiotaomicron, PDB code: 3dec was solved by D.Kumaran, J.Bonanno, R.Romero, S.K.Burley, S.Swaminathan, New York Sgxresearch Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.80
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 80.063, 211.075, 71.085, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 24.3

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of A Glycosyl Hydrolases Family 2 Protein From Bacteroides Thetaiotaomicron (pdb code 3dec). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Structure of A Glycosyl Hydrolases Family 2 Protein From Bacteroides Thetaiotaomicron, PDB code: 3dec:

Potassium binding site 1 out of 1 in 3dec

Go back to Potassium Binding Sites List in 3dec
Potassium binding site 1 out of 1 in the Crystal Structure of A Glycosyl Hydrolases Family 2 Protein From Bacteroides Thetaiotaomicron


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of A Glycosyl Hydrolases Family 2 Protein From Bacteroides Thetaiotaomicron within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1101

b:25.8
occ:1.00
O A:PRO900 2.5 20.6 1.0
O A:HOH1103 2.7 25.8 1.0
O A:HOH1102 2.8 18.2 1.0
O A:LEU942 2.9 24.8 1.0
O A:ALA945 2.9 20.8 1.0
O A:GLU943 3.0 23.6 1.0
C A:GLU943 3.6 24.0 1.0
C A:PRO900 3.7 20.7 1.0
CA A:GLU943 3.9 24.2 1.0
C A:LEU942 4.0 24.3 1.0
CG2 A:ILE899 4.0 17.9 1.0
C A:ALA945 4.1 19.9 1.0
N A:ALA945 4.4 21.6 1.0
N A:LYS944 4.5 24.0 1.0
N A:GLU943 4.5 24.0 1.0
N A:PRO900 4.5 20.4 1.0
CA A:PRO900 4.6 20.6 1.0
CB A:PRO900 4.6 20.8 1.0
C A:LYS944 4.7 22.9 1.0
CA A:ALA945 4.7 20.5 1.0
N A:GLN901 4.7 20.1 1.0
CD A:PRO900 4.7 20.5 1.0
OE1 A:GLU943 4.8 30.0 1.0
CA A:GLN901 4.8 19.5 1.0
CB A:ALA945 5.0 20.2 1.0
O A:ALA766 5.0 19.5 1.0

Reference:

D.Kumaran, J.Bonanno, R.Romero, S.K.Burley, S.Swaminathan. Crystal Structure of A Glycosyl Hydrolases Family 2 Protein From Bacteroides Thetaiotaomicron. To Be Published.
Page generated: Mon Aug 12 08:01:03 2024

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