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Potassium in PDB 2wlj: Potassium Channel From Magnetospirillum Magnetotacticum

Protein crystallography data

The structure of Potassium Channel From Magnetospirillum Magnetotacticum, PDB code: 2wlj was solved by O.B.Clarke, A.T.Caputo, B.J.Smith, J.M.Gulbis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 2.60
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 105.627, 109.385, 88.786, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 24.3

Other elements in 2wlj:

The structure of Potassium Channel From Magnetospirillum Magnetotacticum also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms
Calcium (Ca) 1 atom

Potassium Binding Sites:

The binding sites of Potassium atom in the Potassium Channel From Magnetospirillum Magnetotacticum (pdb code 2wlj). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Potassium Channel From Magnetospirillum Magnetotacticum, PDB code: 2wlj:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 2wlj

Go back to Potassium Binding Sites List in 2wlj
Potassium binding site 1 out of 2 in the Potassium Channel From Magnetospirillum Magnetotacticum


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Potassium Channel From Magnetospirillum Magnetotacticum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1300

b:19.8
occ:0.25
O B:ILE97 2.7 76.6 1.0
O A:ILE97 2.7 66.8 1.0
O A:GLY98 2.9 76.0 1.0
O B:GLY98 3.1 84.1 1.0
C A:GLY98 3.6 75.4 1.0
C B:ILE97 3.7 74.0 1.0
C A:ILE97 3.7 66.1 1.0
C B:GLY98 3.7 82.0 1.0
K A:K1301 3.8 33.1 0.2
CA A:GLY98 3.9 71.8 1.0
CA B:GLY98 4.0 77.7 1.0
N A:GLY98 4.2 67.6 1.0
N B:GLY98 4.2 74.6 1.0
O A:THR96 4.6 60.3 1.0
O B:THR96 4.6 68.4 1.0
N B:TYR99 4.7 83.9 1.0
N A:TYR99 4.7 77.1 1.0
CA B:ILE97 4.8 70.7 1.0
CA A:ILE97 4.8 63.6 1.0

Potassium binding site 2 out of 2 in 2wlj

Go back to Potassium Binding Sites List in 2wlj
Potassium binding site 2 out of 2 in the Potassium Channel From Magnetospirillum Magnetotacticum


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Potassium Channel From Magnetospirillum Magnetotacticum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1301

b:33.1
occ:0.25
O B:TYR99 2.7 95.9 1.0
O A:GLY98 2.7 76.0 1.0
O A:TYR99 2.8 87.3 1.0
O B:GLY98 2.8 84.1 1.0
C B:TYR99 3.5 92.9 1.0
C A:TYR99 3.6 85.7 1.0
K A:K1300 3.8 19.8 0.2
C A:GLY98 3.9 75.4 1.0
C B:GLY98 4.0 82.0 1.0
CA B:TYR99 4.1 89.1 1.0
CA A:TYR99 4.1 81.8 1.0
N B:GLY100 4.4 93.5 1.0
N A:GLY100 4.4 87.1 1.0
CA B:GLY100 4.5 98.3 1.0
N A:TYR99 4.5 77.1 1.0
N B:TYR99 4.6 83.9 1.0
CA A:GLY100 4.7 92.4 1.0

Reference:

O.B.Clarke, A.T.Caputo, A.P.Hill, J.I.Vandenberg, B.J.Smith, J.M.Gulbis. Domain Reorientation and Rotation of An Intracellular Assembly Regulate Conduction in Kir Potassium Channels. Cell(Cambridge,Mass.) V. 141 1018 2010.
ISSN: ISSN 0092-8674
PubMed: 20564790
DOI: 10.1016/J.CELL.2010.05.003
Page generated: Mon Aug 12 07:31:36 2024

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