Atomistry » Potassium » PDB 2adp-2c13 » 2atk
Atomistry »
  Potassium »
    PDB 2adp-2c13 »
      2atk »

Potassium in PDB 2atk: Structure of A Mutant Kcsa K+ Channel

Protein crystallography data

The structure of Structure of A Mutant Kcsa K+ Channel, PDB code: 2atk was solved by J.F.Cordero-Morales, L.G.Cuello, Y.Zhao, V.Jogini, S.Chakrapani, B.Roux, E.Perozo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.50
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 155.160, 155.160, 75.712, 90.00, 90.00, 90.00
R / Rfree (%) 23.8 / 26.1

Potassium Binding Sites:

The binding sites of Potassium atom in the Structure of A Mutant Kcsa K+ Channel (pdb code 2atk). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 7 binding sites of Potassium where determined in the Structure of A Mutant Kcsa K+ Channel, PDB code: 2atk:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7;

Potassium binding site 1 out of 7 in 2atk

Go back to Potassium Binding Sites List in 2atk
Potassium binding site 1 out of 7 in the Structure of A Mutant Kcsa K+ Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of A Mutant Kcsa K+ Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K125

b:56.2
occ:0.25
O C:GLY77 3.1 42.7 1.0
K C:K130 3.4 71.0 0.2
K C:K126 3.6 57.7 0.2
C C:GLY77 3.6 39.8 1.0
CA C:GLY77 4.1 38.0 1.0
N C:TYR78 4.3 41.3 1.0
N C:GLY77 4.4 36.8 1.0
CA C:TYR78 4.6 42.0 1.0
N C:GLY79 4.8 46.5 1.0

Potassium binding site 2 out of 7 in 2atk

Go back to Potassium Binding Sites List in 2atk
Potassium binding site 2 out of 7 in the Structure of A Mutant Kcsa K+ Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Structure of A Mutant Kcsa K+ Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K126

b:57.7
occ:0.25
K C:K127 2.8 68.0 0.2
N C:GLY77 3.5 36.8 1.0
K C:K125 3.6 56.2 0.2
CA C:VAL76 4.2 35.0 1.0
CA C:GLY77 4.3 38.0 1.0
O C:GLY77 4.3 42.7 1.0
C C:VAL76 4.3 36.4 1.0
O C:THR75 4.4 39.2 1.0
CG1 C:VAL76 4.7 28.9 1.0
C C:GLY77 4.8 39.8 1.0

Potassium binding site 3 out of 7 in 2atk

Go back to Potassium Binding Sites List in 2atk
Potassium binding site 3 out of 7 in the Structure of A Mutant Kcsa K+ Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Structure of A Mutant Kcsa K+ Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K127

b:68.0
occ:0.25
K C:K126 2.8 57.7 0.2
O C:THR75 2.9 39.2 1.0
K C:K128 3.1 88.3 0.2
C C:THR75 4.0 38.7 1.0
CA C:VAL76 4.2 35.0 1.0
N C:VAL76 4.6 36.1 1.0
OG1 C:THR75 4.8 38.8 1.0
CB C:THR75 4.8 39.9 1.0
CG2 C:VAL76 4.9 30.5 1.0
N C:GLY77 4.9 36.8 1.0

Potassium binding site 4 out of 7 in 2atk

Go back to Potassium Binding Sites List in 2atk
Potassium binding site 4 out of 7 in the Structure of A Mutant Kcsa K+ Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Structure of A Mutant Kcsa K+ Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K128

b:88.3
occ:0.25
K C:K127 3.1 68.0 0.2
OG1 C:THR75 3.2 38.8 1.0
CB C:THR75 3.9 39.9 1.0
O C:THR75 3.9 39.2 1.0
C C:THR75 4.6 38.7 1.0
O C:THR74 4.7 38.6 1.0
CG2 C:THR75 4.9 39.9 1.0
CA C:THR75 4.9 38.8 1.0

Potassium binding site 5 out of 7 in 2atk

Go back to Potassium Binding Sites List in 2atk
Potassium binding site 5 out of 7 in the Structure of A Mutant Kcsa K+ Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Structure of A Mutant Kcsa K+ Channel within 5.0Å range:

Potassium binding site 6 out of 7 in 2atk

Go back to Potassium Binding Sites List in 2atk
Potassium binding site 6 out of 7 in the Structure of A Mutant Kcsa K+ Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Structure of A Mutant Kcsa K+ Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K130

b:71.0
occ:0.25
N C:GLY79 3.1 46.5 1.0
K C:K125 3.4 56.2 0.2
CA C:GLY79 3.5 48.7 1.0
C C:TYR78 4.3 43.7 1.0
O C:GLY79 4.4 52.2 1.0
C C:GLY79 4.5 51.1 1.0
CA C:TYR78 4.6 42.0 1.0
O C:HOH205 4.7 62.4 0.5

Potassium binding site 7 out of 7 in 2atk

Go back to Potassium Binding Sites List in 2atk
Potassium binding site 7 out of 7 in the Structure of A Mutant Kcsa K+ Channel


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 7 of Structure of A Mutant Kcsa K+ Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K131

b:55.8
occ:0.25
NE2 C:HIS124 2.7 76.3 1.0
CE1 C:HIS124 3.5 77.1 1.0
CD2 C:HIS124 3.8 76.7 1.0
ND1 C:HIS124 4.7 78.0 1.0
CG C:HIS124 4.8 77.1 1.0
NE2 C:GLN119 4.9 82.0 1.0

Reference:

J.F.Cordero-Morales, L.G.Cuello, Y.Zhao, V.Jogini, D.M.Cortes, B.Roux, E.Perozo. Molecular Determinants of Gating at the Potassium-Channel Selectivity Filter. Nat.Struct.Mol.Biol. V. 13 311 2006.
ISSN: ISSN 1545-9993
PubMed: 16532009
DOI: 10.1038/NSMB1069
Page generated: Mon Aug 12 06:02:45 2024

Last articles

Br in 2VUM
Br in 2VOT
Br in 2VQS
Br in 2VPS
Br in 2VPM
Br in 2VMF
Br in 2VO5
Br in 2RC3
Br in 2VL4
Br in 2VJX
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy