Atomistry » Potassium » PDB 1yjn-2aaq » 2a1m
Atomistry »
  Potassium »
    PDB 1yjn-2aaq »
      2a1m »

Potassium in PDB 2a1m: Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM

Enzymatic activity of Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM

All present enzymatic activity of Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM:
1.14.15.1;

Protein crystallography data

The structure of Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM, PDB code: 2a1m was solved by S.Nagano, T.L.Poulos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.82 / 2.10
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 67.060, 62.290, 95.640, 90.00, 90.42, 90.00
R / Rfree (%) 19.1 / 24.7

Other elements in 2a1m:

The structure of Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM (pdb code 2a1m). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 3 binding sites of Potassium where determined in the Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM, PDB code: 2a1m:
Jump to Potassium binding site number: 1; 2; 3;

Potassium binding site 1 out of 3 in 2a1m

Go back to Potassium Binding Sites List in 2a1m
Potassium binding site 1 out of 3 in the Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1515

b:17.0
occ:1.00
O A:GLU84 2.8 11.2 1.0
O A:TYR96 2.9 13.4 1.0
O A:GLU94 3.0 15.7 1.0
O A:GLY93 3.0 15.1 1.0
C A:GLU94 3.5 14.5 1.0
CA A:GLU94 3.7 11.5 1.0
C A:TYR96 3.8 15.0 1.0
C A:GLU84 4.0 15.3 1.0
C A:GLY93 4.0 11.8 1.0
N A:TYR96 4.2 15.2 1.0
N A:GLU94 4.3 11.2 1.0
CA A:TYR96 4.4 15.5 1.0
N A:ALA95 4.4 13.6 1.0
C A:ALA95 4.5 16.1 1.0
CG A:GLU84 4.6 26.7 1.0
CA A:CYS85 4.6 12.6 1.0
CB A:TYR96 4.6 14.1 1.0
N A:CYS85 4.7 11.7 1.0
N A:ASP97 4.8 16.1 1.0
CB A:GLU94 4.9 12.0 1.0
CA A:ASP97 4.9 15.0 1.0
CA A:ALA95 5.0 15.4 1.0
CA A:GLU84 5.0 15.0 1.0

Potassium binding site 2 out of 3 in 2a1m

Go back to Potassium Binding Sites List in 2a1m
Potassium binding site 2 out of 3 in the Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1715

b:24.9
occ:1.00
O A:VAL18 2.9 18.2 1.0
O A:HOH1718 3.0 24.1 1.0
O A:PRO15 3.0 21.9 1.0
O A:HOH1882 3.1 16.6 1.0
OE2 A:GLU20 3.1 23.0 1.0
O A:PRO16 3.2 14.9 1.0
C A:PRO16 3.5 18.3 1.0
O A:HOH1964 3.7 23.4 1.0
CA A:PRO16 3.7 20.9 1.0
C A:VAL18 3.7 16.3 1.0
CD2 A:LEU14 3.8 20.5 1.0
CD A:GLU20 3.9 22.2 1.0
C A:PRO15 4.0 22.7 1.0
N A:VAL18 4.0 13.6 1.0
CG A:LEU14 4.0 14.8 1.0
OE1 A:GLU20 4.2 19.5 1.0
N A:PRO16 4.3 21.6 1.0
CA A:VAL18 4.4 14.1 1.0
N A:HIS17 4.4 17.1 1.0
O A:HOH1720 4.4 38.9 1.0
C A:HIS17 4.6 15.6 1.0
O A:LEU14 4.6 22.2 1.0
N A:PRO19 4.7 17.6 1.0
CB A:VAL18 4.9 12.6 1.0
CA A:PRO19 4.9 19.3 1.0
N A:GLU20 4.9 19.7 1.0
CA A:HIS17 4.9 17.2 1.0

Potassium binding site 3 out of 3 in 2a1m

Go back to Potassium Binding Sites List in 2a1m
Potassium binding site 3 out of 3 in the Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Crystal Structure of Ferrous Dioxygen Complex of Wild-Type Cytochrome P450CAM within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K2515

b:24.8
occ:1.00
O B:TYR96 2.9 19.7 1.0
O B:GLU84 3.0 25.7 1.0
O B:HOH2582 3.1 23.9 1.0
O B:GLU94 3.1 20.5 1.0
O B:GLY93 3.2 23.4 1.0
C B:GLU94 3.7 19.8 1.0
CA B:GLU94 3.9 21.6 1.0
C B:TYR96 3.9 21.1 1.0
C B:GLU84 4.0 24.1 1.0
CG B:GLU84 4.2 39.9 1.0
C B:GLY93 4.3 22.3 1.0
N B:TYR96 4.4 21.1 1.0
CA B:TYR96 4.6 20.2 1.0
N B:GLU94 4.6 21.6 1.0
N B:ALA95 4.6 20.2 1.0
C B:ALA95 4.7 20.0 1.0
CA B:CYS85 4.8 19.9 1.0
N B:CYS85 4.8 21.1 1.0
CB B:TYR96 4.8 20.1 1.0
N B:ASP97 4.9 20.9 1.0
CA B:GLU84 4.9 24.7 1.0

Reference:

S.Nagano, T.L.Poulos. Crystallographic Study on the Dioxygen Complex of Wild-Type and Mutant Cytochrome P450CAM. Implications For the Dioxygen Activation Mechanism J.Biol.Chem. V. 280 31659 2005.
ISSN: ISSN 0021-9258
PubMed: 15994329
DOI: 10.1074/JBC.M505261200
Page generated: Mon Aug 12 05:57:21 2024

Last articles

F in 5JFR
F in 5JEI
F in 5JAJ
F in 5JBG
F in 5JB2
F in 5J8U
F in 5J9X
F in 5JAL
F in 5J7P
F in 5J8M
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy