Atomistry » Potassium » PDB 9mel-9v0k » 9nge
Atomistry »
  Potassium »
    PDB 9mel-9v0k »
      9nge »

Potassium in PDB 9nge: The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone

Enzymatic activity of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone

All present enzymatic activity of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone:
2.7.10.2;

Protein crystallography data

The structure of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone, PDB code: 9nge was solved by J.C.Averett, M.J.Bradford, B.J.Averett, D.Hansen, T.Doukov, J.D.Moody, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.67 / 2.02
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 126.935, 77.487, 38.342, 90, 106.99, 90
R / Rfree (%) 21.3 / 23

Other elements in 9nge:

The structure of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone also contains other interesting chemical elements:

Sodium (Na) 1 atom

Potassium Binding Sites:

The binding sites of Potassium atom in the The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone (pdb code 9nge). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone, PDB code: 9nge:
Jump to Potassium binding site number: 1; 2; 3; 4;

Potassium binding site 1 out of 4 in 9nge

Go back to Potassium Binding Sites List in 9nge
Potassium binding site 1 out of 4 in the The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K204

b:80.8
occ:1.00
 O A:HOH314 2.3 61.4 1.0
OH A:TYR160 4.1 53.8 1.0
HG12 A:ILE146 4.1 57.1 1.0
HH A:TYR160 4.2 64.9 1.0
HA A:ILE146 4.3 41.7 1.0
CZ A:TYR160 4.3 53.2 1.0
HB3 A:HIS149 4.4 50.4 1.0
HB2 A:HIS149 4.4 50.4 1.0
CG A:HIS149 4.5 46.3 1.0
ND1 A:HIS149 4.6 49.6 1.0
CE2 A:TYR160 4.7 40.8 1.0
CE1 A:TYR160 4.7 47.6 1.0
CB A:HIS149 4.7 41.8 1.0
HD1 A:HIS149 4.7 59.8 1.0
CD2 A:HIS149 4.8 40.4 1.0
HE2 A:TYR160 4.8 49.2 1.0
HE1 A:TYR160 4.8 57.4 1.0
HG13 A:ILE146 4.9 57.1 1.0
CE1 A:HIS149 4.9 46.6 1.0
CG1 A:ILE146 4.9 47.4 1.0

Potassium binding site 2 out of 4 in 9nge

Go back to Potassium Binding Sites List in 9nge
Potassium binding site 2 out of 4 in the The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K205

b:90.2
occ:1.00
 HE A:ARG164 3.3 83.0 1.0
HB2 A:ARG164 3.4 75.7 1.0
NE A:ARG164 3.8 69.0 1.0
HH22 A:ARG164 3.9 78.7 1.0
O A:ARG164 4.0 78.0 1.0
HG3 A:ARG164 4.1 70.0 1.0
CB A:ARG164 4.3 62.8 1.0
NH2 A:ARG164 4.3 65.3 1.0
CZ A:ARG164 4.4 62.0 1.0
CG A:ARG164 4.5 58.1 1.0
CD A:ARG164 4.6 63.0 1.0
HD2 A:ARG164 4.7 75.8 1.0
HB3 A:ARG164 4.9 75.7 1.0
C A:ARG164 4.9 77.0 1.0
HH21 A:ARG164 5.0 78.7 1.0

Potassium binding site 3 out of 4 in 9nge

Go back to Potassium Binding Sites List in 9nge
Potassium binding site 3 out of 4 in the The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K206

b:114.2
occ:1.00
 HE1 A:PHE68 2.4 120.2 1.0
O A:LEU63 2.5 86.2 1.0
O A:LEU60 2.7 99.5 1.0
HD23 A:LEU83 2.8 78.6 1.0
H A:LEU63 2.9 110.6 1.0
HA A:LEU61 2.9 108.0 1.0
O A:HOH308 3.1 81.8 1.0
HB2 A:LEU63 3.3 98.0 1.0
CE1 A:PHE68 3.3 99.9 1.0
HD21 A:LEU83 3.5 78.6 1.0
N A:LEU63 3.5 91.9 1.0
C A:LEU63 3.5 87.8 1.0
C A:LEU61 3.5 94.5 1.0
CD2 A:LEU83 3.5 65.3 1.0
O A:LEU61 3.6 102.8 1.0
CA A:LEU61 3.6 89.7 1.0
HE1 A:TYR80 3.7 94.7 1.0
C A:LEU60 3.7 104.0 1.0
CA A:LEU63 3.9 86.3 1.0
HD1 A:TYR80 3.9 86.2 1.0
HD22 A:LEU83 4.0 78.6 1.0
CB A:LEU63 4.0 81.4 1.0
HZ A:PHE68 4.1 97.2 1.0
HD1 A:PHE68 4.1 100.6 1.0
N A:GLU62 4.1 92.4 1.0
N A:LEU61 4.1 92.5 1.0
CZ A:PHE68 4.2 80.8 1.0
CD1 A:PHE68 4.2 83.6 1.0
CE1 A:TYR80 4.3 78.7 1.0
HD23 A:LEU61 4.3 101.2 1.0
CD1 A:TYR80 4.4 71.6 1.0
C A:GLU62 4.4 80.1 1.0
HG A:LEU60 4.5 91.1 1.0
H A:GLU62 4.5 111.1 1.0
HB3 A:LEU63 4.5 98.0 1.0
OE1 A:GLN84 4.6 66.5 1.0
HG A:LEU83 4.7 75.2 1.0
N A:THR64 4.7 86.0 1.0
CA A:GLU62 4.7 90.8 1.0
CG A:LEU83 4.8 62.4 1.0
HA A:THR64 4.8 117.7 1.0
HA A:LEU63 4.8 103.9 1.0
HA A:GLU62 4.8 109.2 1.0
CB A:LEU61 4.9 87.2 1.0
HB3 A:LEU61 5.0 104.9 1.0
HG A:LEU63 5.0 109.8 1.0
HD12 A:LEU60 5.0 90.3 1.0
H A:LEU61 5.0 111.3 1.0

Potassium binding site 4 out of 4 in 9nge

Go back to Potassium Binding Sites List in 9nge
Potassium binding site 4 out of 4 in the The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K201

b:83.6
occ:1.00
 O B:GLU98 2.5 48.0 1.0
HB3 B:GLU98 3.0 65.5 1.0
C B:GLU98 3.3 43.2 1.0
O B:VAL104 3.4 77.0 1.0
H B:GLY103 3.5 90.3 1.0
HA B:GLU98 3.6 61.2 1.0
O B:VAL101 3.6 62.6 1.0
HA B:HIS102 3.7 85.4 1.0
H B:VAL104 3.7 87.1 1.0
CB B:GLU98 3.7 54.4 1.0
CA B:GLU98 3.8 50.8 1.0
HB B:VAL104 4.0 86.5 1.0
HG2 B:GLU98 4.0 79.8 1.0
N B:GLY103 4.1 75.0 1.0
N B:VAL104 4.1 72.3 1.0
HA B:LEU99 4.2 48.4 1.0
N B:LEU99 4.4 41.3 1.0
C B:VAL104 4.4 72.4 1.0
CG B:GLU98 4.4 66.3 1.0
CA B:HIS102 4.5 71.0 1.0
C B:VAL101 4.5 67.0 1.0
HB2 B:GLU98 4.5 65.5 1.0
C B:HIS102 4.6 69.3 1.0
CA B:VAL104 4.6 74.2 1.0
CB B:VAL104 4.7 71.8 1.0
C B:GLY103 4.7 77.5 1.0
HG12 B:VAL104 4.7 85.3 1.0
CA B:LEU99 4.7 40.1 1.0
H B:VAL101 4.8 63.6 1.0
N B:HIS102 4.9 64.9 1.0
CA B:GLY103 4.9 75.3 1.0
HD23 B:LEU99 4.9 59.6 1.0

Reference:

J.C.Averett, J.C.Averett, M.J.Bradford, B.J.Averett, D.Hansen, T.Doukov, J.D.Moody. N/A N/A.
Page generated: Sat Aug 9 19:20:04 2025

Last articles

Mg in 1LNT
Mg in 1LNY
Mg in 1LGH
Mg in 1LNG
Mg in 1L9A
Mg in 1LKX
Mg in 1LM3
Mg in 1LJ0
Mg in 1LJX
Mg in 1LIJ
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy