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Potassium in PDB 9es2: Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex

Enzymatic activity of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex

All present enzymatic activity of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex:
3.6.4.9;

Other elements in 9es2:

The structure of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex also contains other interesting chemical elements:

Magnesium (Mg) 14 atoms

Potassium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 14;

Binding sites:

The binding sites of Potassium atom in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex (pdb code 9es2). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 14 binding sites of Potassium where determined in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex, PDB code: 9es2:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Potassium binding site 1 out of 14 in 9es2

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Potassium binding site 1 out of 14 in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K603

b:35.0
occ:1.00
O A:LYS51 2.7 42.3 1.0
O2G A:ATP601 2.7 46.8 1.0
O2A A:ATP601 2.7 51.9 1.0
OG1 A:THR90 2.8 42.0 1.0
OG1 A:THR30 2.9 27.0 1.0
O A:THR30 3.2 27.9 1.0
O A:HOH736 3.4 61.4 1.0
O3A A:ATP601 3.5 56.6 1.0
PA A:ATP601 3.6 25.6 1.0
CB A:THR30 3.7 24.1 1.0
C A:THR30 3.7 24.7 1.0
CB A:THR90 3.8 32.3 1.0
PG A:ATP601 3.8 33.6 1.0
C A:LYS51 3.8 37.7 1.0
O3G A:ATP601 4.0 42.9 1.0
O3B A:ATP601 4.1 41.6 1.0
N A:GLY53 4.1 35.5 1.0
O1A A:ATP601 4.1 48.7 1.0
CG2 A:THR90 4.2 32.9 1.0
NZ A:LYS51 4.3 23.2 1.0
N A:MET31 4.3 40.1 1.0
CA A:THR30 4.4 19.2 1.0
CA A:MET31 4.4 30.4 1.0
CA A:ASP52 4.4 31.0 1.0
N A:ASP52 4.5 44.5 1.0
C A:ASP52 4.5 41.1 1.0
PB A:ATP601 4.5 35.0 1.0
O A:HOH772 4.6 73.8 1.0
CG A:LYS51 4.7 27.9 1.0
CA A:GLY53 4.7 34.7 1.0
CA A:LYS51 4.8 24.6 1.0
CG2 A:THR30 5.0 25.5 1.0
O5' A:ATP601 5.0 41.2 1.0

Potassium binding site 2 out of 14 in 9es2

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Potassium binding site 2 out of 14 in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K603

b:37.6
occ:1.00
O B:LYS51 2.7 44.9 1.0
O2A B:ATP601 2.7 56.5 1.0
OG1 B:THR90 2.7 45.1 1.0
O2G B:ATP601 2.8 44.6 1.0
OG1 B:THR30 2.9 30.5 1.0
O B:THR30 3.2 26.0 1.0
O B:HOH735 3.4 59.2 1.0
O3A B:ATP601 3.5 49.0 1.0
PA B:ATP601 3.6 38.9 1.0
CB B:THR30 3.7 26.3 1.0
C B:THR30 3.8 24.5 1.0
CB B:THR90 3.8 32.8 1.0
PG B:ATP601 3.8 39.2 1.0
C B:LYS51 3.8 39.1 1.0
O3G B:ATP601 3.8 43.4 1.0
N B:GLY53 4.0 36.7 1.0
O3B B:ATP601 4.1 46.2 1.0
O1A B:ATP601 4.1 53.6 1.0
CG2 B:THR90 4.2 36.2 1.0
NZ B:LYS51 4.3 24.5 1.0
CA B:ASP52 4.4 33.1 1.0
N B:MET31 4.4 36.1 1.0
CA B:THR30 4.4 19.4 1.0
CA B:MET31 4.5 29.9 1.0
N B:ASP52 4.5 46.0 1.0
C B:ASP52 4.5 40.2 1.0
O B:HOH763 4.5 73.8 1.0
PB B:ATP601 4.6 33.9 1.0
CA B:GLY53 4.7 30.3 1.0
CG B:LYS51 4.7 25.2 1.0
CA B:LYS51 4.8 26.4 1.0
O5' B:ATP601 5.0 47.2 1.0
CG2 B:THR30 5.0 24.0 1.0

Potassium binding site 3 out of 14 in 9es2

Go back to Potassium Binding Sites List in 9es2
Potassium binding site 3 out of 14 in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K603

b:36.4
occ:1.00
O C:LYS51 2.7 47.2 1.0
O2A C:ATP601 2.7 54.2 1.0
O2G C:ATP601 2.8 45.7 1.0
OG1 C:THR90 2.8 46.8 1.0
OG1 C:THR30 2.8 28.3 1.0
O C:THR30 3.1 22.1 1.0
O C:HOH734 3.4 59.4 1.0
O3A C:ATP601 3.5 52.3 1.0
PA C:ATP601 3.6 31.2 1.0
C C:THR30 3.7 22.3 1.0
CB C:THR30 3.7 18.9 1.0
CB C:THR90 3.8 36.6 1.0
C C:LYS51 3.8 38.0 1.0
PG C:ATP601 3.8 45.7 1.0
O3B C:ATP601 4.0 45.3 1.0
O3G C:ATP601 4.0 47.9 1.0
N C:GLY53 4.1 36.4 1.0
O1A C:ATP601 4.1 55.7 1.0
CG2 C:THR90 4.2 32.1 1.0
NZ C:LYS51 4.3 22.7 1.0
N C:MET31 4.3 36.7 1.0
CA C:THR30 4.4 20.0 1.0
CA C:MET31 4.4 30.5 1.0
CA C:ASP52 4.5 34.5 1.0
C C:ASP52 4.5 40.4 1.0
PB C:ATP601 4.5 32.4 1.0
N C:ASP52 4.6 43.6 1.0
O C:HOH747 4.6 81.2 1.0
CG C:LYS51 4.7 29.3 1.0
CA C:GLY53 4.7 34.4 1.0
CA C:LYS51 4.8 21.2 1.0
CB C:LYS51 5.0 23.4 1.0
CG2 C:THR30 5.0 22.3 1.0
O5' C:ATP601 5.0 46.8 1.0

Potassium binding site 4 out of 14 in 9es2

Go back to Potassium Binding Sites List in 9es2
Potassium binding site 4 out of 14 in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:K603

b:37.4
occ:1.00
O D:LYS51 2.7 49.2 1.0
O2A D:ATP601 2.7 52.4 1.0
OG1 D:THR90 2.7 44.1 1.0
O2G D:ATP601 2.8 43.0 1.0
OG1 D:THR30 2.9 29.7 1.0
O D:THR30 3.2 27.8 1.0
O D:HOH751 3.5 54.7 1.0
PA D:ATP601 3.6 25.2 1.0
O3A D:ATP601 3.6 47.3 1.0
C D:THR30 3.7 25.1 1.0
CB D:THR90 3.8 32.1 1.0
CB D:THR30 3.8 25.5 1.0
PG D:ATP601 3.8 39.9 1.0
C D:LYS51 3.8 42.7 1.0
O3G D:ATP601 3.9 45.7 1.0
O3B D:ATP601 3.9 46.1 1.0
N D:GLY53 4.0 37.6 1.0
O1A D:ATP601 4.1 55.3 1.0
CG2 D:THR90 4.2 25.9 1.0
NZ D:LYS51 4.3 27.3 1.0
N D:MET31 4.4 35.4 1.0
CA D:THR30 4.4 25.8 1.0
CA D:MET31 4.4 28.6 1.0
CA D:ASP52 4.4 33.5 1.0
C D:ASP52 4.5 43.0 1.0
N D:ASP52 4.5 45.3 1.0
PB D:ATP601 4.6 32.5 1.0
CA D:GLY53 4.7 30.9 1.0
CG D:LYS51 4.7 33.0 1.0
O D:HOH756 4.8 81.6 1.0
CA D:LYS51 4.8 24.4 1.0

Potassium binding site 5 out of 14 in 9es2

Go back to Potassium Binding Sites List in 9es2
Potassium binding site 5 out of 14 in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
E:K603

b:33.7
occ:1.00
O E:LYS51 2.7 43.7 1.0
OG1 E:THR90 2.8 49.0 1.0
O2A E:ATP601 2.8 54.8 1.0
O2G E:ATP601 2.8 45.4 1.0
OG1 E:THR30 2.8 26.9 1.0
O E:THR30 3.2 27.6 1.0
O E:HOH750 3.4 69.2 1.0
O3A E:ATP601 3.6 50.6 1.0
PA E:ATP601 3.6 35.5 1.0
C E:THR30 3.7 25.3 1.0
CB E:THR30 3.7 23.9 1.0
CB E:THR90 3.8 30.2 1.0
PG E:ATP601 3.8 38.8 1.0
C E:LYS51 3.8 36.5 1.0
O3G E:ATP601 4.0 45.0 1.0
O3B E:ATP601 4.0 43.5 1.0
N E:GLY53 4.0 38.1 1.0
O1A E:ATP601 4.1 58.6 1.0
CG2 E:THR90 4.2 29.6 1.0
NZ E:LYS51 4.2 22.1 1.0
N E:MET31 4.4 34.0 1.0
CA E:THR30 4.4 20.1 1.0
CA E:MET31 4.4 26.0 1.0
CA E:ASP52 4.5 34.7 1.0
C E:ASP52 4.5 39.9 1.0
N E:ASP52 4.6 40.9 1.0
PB E:ATP601 4.6 32.9 1.0
O E:HOH749 4.6 72.0 1.0
CA E:GLY53 4.7 30.5 1.0
CG E:LYS51 4.8 26.9 1.0
CA E:LYS51 4.9 22.9 1.0
CG2 E:THR30 5.0 23.6 1.0

Potassium binding site 6 out of 14 in 9es2

Go back to Potassium Binding Sites List in 9es2
Potassium binding site 6 out of 14 in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
F:K603

b:36.3
occ:1.00
O F:LYS51 2.7 43.2 1.0
OG1 F:THR90 2.7 48.0 1.0
O2A F:ATP601 2.8 55.4 1.0
OG1 F:THR30 2.8 26.5 1.0
O2G F:ATP601 2.8 43.8 1.0
O F:THR30 3.1 28.8 1.0
O3A F:ATP601 3.5 51.9 1.0
O F:HOH735 3.5 70.0 1.0
PA F:ATP601 3.7 31.2 1.0
CB F:THR30 3.7 28.1 1.0
C F:THR30 3.7 24.8 1.0
CB F:THR90 3.8 38.3 1.0
C F:LYS51 3.8 38.7 1.0
PG F:ATP601 3.8 36.0 1.0
O3G F:ATP601 3.8 46.5 1.0
N F:GLY53 4.0 40.3 1.0
O3B F:ATP601 4.1 44.9 1.0
CG2 F:THR90 4.2 29.3 1.0
O1A F:ATP601 4.2 54.1 1.0
NZ F:LYS51 4.2 24.3 1.0
N F:MET31 4.4 35.0 1.0
CA F:THR30 4.4 23.8 1.0
CA F:ASP52 4.4 41.2 1.0
CA F:MET31 4.4 28.5 1.0
C F:ASP52 4.5 42.9 1.0
N F:ASP52 4.5 50.7 1.0
O F:HOH742 4.5 70.2 1.0
PB F:ATP601 4.6 36.4 1.0
CA F:GLY53 4.6 32.6 1.0
CG F:LYS51 4.8 26.4 1.0
CA F:LYS51 4.8 24.2 1.0
CG2 F:THR30 5.0 21.2 1.0

Potassium binding site 7 out of 14 in 9es2

Go back to Potassium Binding Sites List in 9es2
Potassium binding site 7 out of 14 in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 7 of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
G:K603

b:31.5
occ:1.00
O G:LYS51 2.7 41.8 1.0
OG1 G:THR30 2.8 22.1 1.0
O2G G:ATP601 2.8 29.8 1.0
OG1 G:THR90 2.8 44.5 1.0
O2A G:ATP601 2.8 42.2 1.0
O G:THR30 3.1 25.8 1.0
O G:HOH728 3.4 59.8 1.0
O3A G:ATP601 3.6 32.5 1.0
PA G:ATP601 3.7 28.5 1.0
CB G:THR30 3.7 23.5 1.0
C G:THR30 3.7 22.6 1.0
C G:LYS51 3.8 36.6 1.0
CB G:THR90 3.8 30.9 1.0
PG G:ATP601 3.8 30.8 1.0
N G:GLY53 4.0 36.0 1.0
O3B G:ATP601 4.0 30.5 1.0
O3G G:ATP601 4.0 24.6 1.0
O1A G:ATP601 4.2 38.5 1.0
CG2 G:THR90 4.2 29.5 1.0
NZ G:LYS51 4.3 18.6 1.0
CA G:ASP52 4.4 33.1 1.0
N G:MET31 4.4 33.5 1.0
CA G:THR30 4.4 23.9 1.0
CA G:MET31 4.4 27.1 1.0
C G:ASP52 4.4 41.5 1.0
N G:ASP52 4.5 43.1 1.0
O G:HOH742 4.5 69.5 1.0
PB G:ATP601 4.6 27.7 1.0
CA G:GLY53 4.7 32.2 1.0
CG G:LYS51 4.7 30.1 1.0
CA G:LYS51 4.8 18.6 1.0
CG2 G:THR30 4.9 19.3 1.0
CB G:LYS51 5.0 19.6 1.0

Potassium binding site 8 out of 14 in 9es2

Go back to Potassium Binding Sites List in 9es2
Potassium binding site 8 out of 14 in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 8 of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
H:K603

b:36.3
occ:1.00
O H:LYS51 2.7 44.2 1.0
O2G H:ATP601 2.7 46.8 1.0
O2A H:ATP601 2.7 52.3 1.0
OG1 H:THR90 2.8 43.0 1.0
OG1 H:THR30 2.9 24.4 1.0
O H:THR30 3.1 26.3 1.0
O H:HOH746 3.4 64.7 1.0
O3A H:ATP601 3.5 55.2 1.0
PA H:ATP601 3.6 22.9 1.0
C H:THR30 3.7 24.9 1.0
CB H:THR30 3.7 25.3 1.0
CB H:THR90 3.8 32.9 1.0
PG H:ATP601 3.8 39.1 1.0
C H:LYS51 3.8 38.3 1.0
O3B H:ATP601 4.0 43.7 1.0
O3G H:ATP601 4.0 45.1 1.0
N H:GLY53 4.1 35.7 1.0
O1A H:ATP601 4.1 52.3 1.0
CG2 H:THR90 4.2 35.3 1.0
NZ H:LYS51 4.2 23.7 1.0
N H:MET31 4.3 37.1 1.0
CA H:THR30 4.4 21.8 1.0
CA H:MET31 4.4 21.3 1.0
CA H:ASP52 4.5 35.9 1.0
PB H:ATP601 4.5 35.6 1.0
C H:ASP52 4.5 42.7 1.0
N H:ASP52 4.6 47.6 1.0
O H:HOH755 4.6 73.4 1.0
CA H:GLY53 4.7 35.6 1.0
CG H:LYS51 4.7 26.8 1.0
CA H:LYS51 4.9 23.1 1.0
O5' H:ATP601 5.0 40.2 1.0
CB H:LYS51 5.0 25.1 1.0

Potassium binding site 9 out of 14 in 9es2

Go back to Potassium Binding Sites List in 9es2
Potassium binding site 9 out of 14 in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 9 of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
I:K603

b:36.3
occ:1.00
O I:LYS51 2.7 43.9 1.0
O2A I:ATP601 2.7 48.4 1.0
OG1 I:THR90 2.8 43.4 1.0
O2G I:ATP601 2.8 36.8 1.0
OG1 I:THR30 2.9 28.3 1.0
O I:THR30 3.1 21.6 1.0
O I:HOH745 3.4 56.5 1.0
PA I:ATP601 3.6 31.8 1.0
O3A I:ATP601 3.6 33.9 1.0
C I:THR30 3.7 22.6 1.0
CB I:THR90 3.8 31.1 1.0
CB I:THR30 3.8 23.6 1.0
PG I:ATP601 3.8 37.6 1.0
C I:LYS51 3.8 38.6 1.0
O3G I:ATP601 3.9 30.2 1.0
O3B I:ATP601 4.0 29.7 1.0
N I:GLY53 4.0 33.4 1.0
O1A I:ATP601 4.1 40.9 1.0
CG2 I:THR90 4.2 34.2 1.0
NZ I:LYS51 4.3 25.9 1.0
N I:MET31 4.4 36.5 1.0
CA I:MET31 4.4 28.5 1.0
CA I:THR30 4.4 20.1 1.0
CA I:ASP52 4.5 32.0 1.0
C I:ASP52 4.5 38.3 1.0
N I:ASP52 4.6 45.5 1.0
PB I:ATP601 4.6 30.4 1.0
O I:HOH750 4.6 71.0 1.0
CA I:GLY53 4.7 26.6 1.0
CG I:LYS51 4.8 23.1 1.0
CA I:LYS51 4.9 25.2 1.0
O5' I:ATP601 5.0 34.0 1.0

Potassium binding site 10 out of 14 in 9es2

Go back to Potassium Binding Sites List in 9es2
Potassium binding site 10 out of 14 in the Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 10 of Atp-Bound Human Mitochondrial HSP60 Double-Ring Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
J:K603

b:35.4
occ:1.00
O J:LYS51 2.7 46.2 1.0
O2A J:ATP601 2.7 53.9 1.0
O2G J:ATP601 2.8 48.4 1.0
OG1 J:THR90 2.8 49.3 1.0
OG1 J:THR30 2.8 30.7 1.0
O J:THR30 3.1 23.2 1.0
O J:HOH735 3.4 57.7 1.0
O3A J:ATP601 3.5 52.1 1.0
PA J:ATP601 3.6 32.3 1.0
C J:THR30 3.7 22.3 1.0
CB J:THR30 3.7 21.2 1.0
CB J:THR90 3.8 40.3 1.0
C J:LYS51 3.8 38.1 1.0
PG J:ATP601 3.8 44.7 1.0
O3B J:ATP601 4.0 45.8 1.0
O3G J:ATP601 4.0 47.0 1.0
N J:GLY53 4.0 36.2 1.0
O1A J:ATP601 4.1 53.2 1.0
CG2 J:THR90 4.2 35.3 1.0
NZ J:LYS51 4.3 22.0 1.0
N J:MET31 4.4 34.1 1.0
CA J:THR30 4.4 20.3 1.0
CA J:MET31 4.4 28.5 1.0
CA J:ASP52 4.5 33.0 1.0
C J:ASP52 4.5 39.0 1.0
PB J:ATP601 4.5 31.0 1.0
N J:ASP52 4.6 44.1 1.0
O J:HOH748 4.6 81.4 1.0
CG J:LYS51 4.7 28.7 1.0
CA J:GLY53 4.7 32.4 1.0
CA J:LYS51 4.8 22.3 1.0
CB J:LYS51 5.0 26.5 1.0
CG2 J:THR30 5.0 22.5 1.0
O5' J:ATP601 5.0 48.2 1.0

Reference:

I.Tascon, J.P.Lopez-Alonso, I.Ubarretxena-Belandia, J.Vilchez, Y.Shkolnisky, A.Azem, J.Hirsch. Structural Basis For Atp-Triggered Assembly of Human Mitochondrial HSP60-HSP10 Chaperonin To Be Published.
Page generated: Sat Aug 9 18:52:11 2025

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