Potassium in PDB 8s3e: Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26
Other elements in 8s3e:
The structure of Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26 also contains other interesting chemical elements:
Potassium Binding Sites:
The binding sites of Potassium atom in the Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26
(pdb code 8s3e). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the
Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26, PDB code: 8s3e:
Jump to Potassium binding site number:
1;
2;
3;
4;
Potassium binding site 1 out
of 4 in 8s3e
Go back to
Potassium Binding Sites List in 8s3e
Potassium binding site 1 out
of 4 in the Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K1217
b:30.0
occ:1.00
|
O
|
D:VAL288
|
2.9
|
33.4
|
1.0
|
O
|
A:VAL288
|
3.0
|
33.4
|
1.0
|
O
|
C:VAL288
|
3.0
|
33.4
|
1.0
|
O
|
B:VAL288
|
3.1
|
33.4
|
1.0
|
O
|
D:GLY289
|
3.2
|
46.3
|
1.0
|
K
|
A:K1218
|
3.3
|
30.0
|
1.0
|
O
|
C:GLY289
|
3.3
|
46.3
|
1.0
|
O
|
A:GLY289
|
3.3
|
46.3
|
1.0
|
O
|
B:GLY289
|
3.4
|
46.3
|
1.0
|
K
|
D:K1217
|
3.5
|
30.0
|
1.0
|
C
|
D:GLY289
|
3.5
|
22.6
|
1.0
|
CA
|
D:GLY289
|
3.6
|
12.2
|
1.0
|
C
|
A:GLY289
|
3.6
|
22.6
|
1.0
|
C
|
C:GLY289
|
3.7
|
22.6
|
1.0
|
CA
|
A:GLY289
|
3.7
|
12.2
|
1.0
|
C
|
B:GLY289
|
3.7
|
22.6
|
1.0
|
CA
|
B:GLY289
|
3.7
|
12.2
|
1.0
|
CA
|
C:GLY289
|
3.8
|
12.2
|
1.0
|
C
|
D:VAL288
|
4.0
|
13.0
|
1.0
|
C
|
A:VAL288
|
4.0
|
13.0
|
1.0
|
C
|
C:VAL288
|
4.1
|
13.0
|
1.0
|
C
|
B:VAL288
|
4.1
|
13.0
|
1.0
|
N
|
D:GLY289
|
4.3
|
13.5
|
1.0
|
N
|
A:GLY289
|
4.3
|
13.5
|
1.0
|
N
|
B:GLY289
|
4.4
|
13.5
|
1.0
|
N
|
D:TYR290
|
4.4
|
26.0
|
1.0
|
N
|
C:GLY289
|
4.4
|
13.5
|
1.0
|
N
|
A:TYR290
|
4.5
|
26.0
|
1.0
|
N
|
C:TYR290
|
4.6
|
26.0
|
1.0
|
N
|
B:TYR290
|
4.6
|
26.0
|
1.0
|
|
Potassium binding site 2 out
of 4 in 8s3e
Go back to
Potassium Binding Sites List in 8s3e
Potassium binding site 2 out
of 4 in the Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K1218
b:30.0
occ:1.00
|
K
|
A:K1217
|
3.3
|
30.0
|
1.0
|
O
|
D:TYR290
|
3.3
|
40.4
|
1.0
|
O
|
C:TYR290
|
3.4
|
40.4
|
1.0
|
O
|
A:TYR290
|
3.4
|
40.4
|
1.0
|
O
|
B:TYR290
|
3.5
|
40.4
|
1.0
|
C
|
D:TYR290
|
3.6
|
31.1
|
1.0
|
C
|
A:TYR290
|
3.7
|
31.1
|
1.0
|
C
|
C:TYR290
|
3.7
|
31.1
|
1.0
|
C
|
B:TYR290
|
3.8
|
31.1
|
1.0
|
CA
|
D:TYR290
|
4.0
|
25.9
|
1.0
|
CA
|
A:TYR290
|
4.1
|
25.9
|
1.0
|
O
|
D:GLY289
|
4.1
|
46.3
|
1.0
|
O
|
A:GLY289
|
4.1
|
46.3
|
1.0
|
CA
|
C:TYR290
|
4.1
|
25.9
|
1.0
|
CA
|
B:TYR290
|
4.2
|
25.9
|
1.0
|
O
|
C:GLY289
|
4.2
|
46.3
|
1.0
|
N
|
D:TYR290
|
4.2
|
26.0
|
1.0
|
C
|
D:GLY289
|
4.2
|
22.6
|
1.0
|
N
|
D:GLY291
|
4.2
|
27.4
|
1.0
|
O
|
B:GLY289
|
4.2
|
46.3
|
1.0
|
C
|
A:GLY289
|
4.2
|
22.6
|
1.0
|
N
|
A:TYR290
|
4.3
|
26.0
|
1.0
|
C
|
B:GLY289
|
4.3
|
22.6
|
1.0
|
N
|
B:TYR290
|
4.3
|
26.0
|
1.0
|
N
|
B:GLY291
|
4.3
|
27.4
|
1.0
|
N
|
A:GLY291
|
4.4
|
27.4
|
1.0
|
C
|
C:GLY289
|
4.4
|
22.6
|
1.0
|
N
|
C:TYR290
|
4.4
|
26.0
|
1.0
|
N
|
C:GLY291
|
4.4
|
27.4
|
1.0
|
O
|
C:HOH1301
|
4.7
|
30.0
|
1.0
|
CA
|
D:GLY291
|
4.8
|
27.6
|
1.0
|
O
|
D:HOH1301
|
4.8
|
30.0
|
1.0
|
CA
|
B:GLY291
|
4.8
|
27.6
|
1.0
|
CA
|
A:GLY291
|
4.9
|
27.6
|
1.0
|
O
|
A:HOH1301
|
4.9
|
30.0
|
1.0
|
O
|
B:HOH1301
|
4.9
|
30.0
|
1.0
|
CA
|
C:GLY291
|
4.9
|
27.6
|
1.0
|
|
Potassium binding site 3 out
of 4 in 8s3e
Go back to
Potassium Binding Sites List in 8s3e
Potassium binding site 3 out
of 4 in the Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 3 of Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:K1217
b:30.0
occ:1.00
|
O
|
D:THR287
|
2.7
|
37.9
|
1.0
|
O
|
B:THR287
|
2.7
|
37.9
|
1.0
|
O
|
A:THR287
|
2.7
|
37.9
|
1.0
|
O
|
C:THR287
|
2.7
|
37.9
|
1.0
|
OG1
|
B:THR287
|
3.1
|
30.1
|
1.0
|
OG1
|
A:THR287
|
3.1
|
30.1
|
1.0
|
OG1
|
D:THR287
|
3.1
|
30.1
|
1.0
|
K
|
D:K1217
|
3.2
|
30.0
|
1.0
|
OG1
|
C:THR287
|
3.3
|
30.1
|
1.0
|
CB
|
B:THR287
|
3.4
|
21.1
|
1.0
|
CB
|
A:THR287
|
3.5
|
21.1
|
1.0
|
CB
|
D:THR287
|
3.6
|
21.1
|
1.0
|
O
|
D:HOH1304
|
3.6
|
30.0
|
1.0
|
CB
|
C:THR287
|
3.7
|
21.1
|
1.0
|
C
|
D:THR287
|
3.7
|
15.0
|
1.0
|
C
|
B:THR287
|
3.7
|
15.0
|
1.0
|
C
|
A:THR287
|
3.8
|
15.0
|
1.0
|
C
|
C:THR287
|
3.8
|
15.0
|
1.0
|
CA
|
B:THR287
|
4.2
|
17.8
|
1.0
|
CA
|
D:THR287
|
4.3
|
17.8
|
1.0
|
CA
|
A:THR287
|
4.3
|
17.8
|
1.0
|
CA
|
C:THR287
|
4.4
|
17.8
|
1.0
|
CG2
|
B:THR287
|
4.7
|
21.0
|
1.0
|
N
|
D:VAL288
|
4.7
|
19.4
|
1.0
|
CG2
|
A:THR287
|
4.8
|
21.0
|
1.0
|
N
|
B:VAL288
|
4.8
|
19.4
|
1.0
|
N
|
C:VAL288
|
4.8
|
19.4
|
1.0
|
N
|
A:VAL288
|
4.8
|
19.4
|
1.0
|
CG2
|
D:THR287
|
4.8
|
21.0
|
1.0
|
CG2
|
C:THR287
|
5.0
|
21.0
|
1.0
|
CA
|
D:VAL288
|
5.0
|
15.9
|
1.0
|
CA
|
C:VAL288
|
5.0
|
15.9
|
1.0
|
|
Potassium binding site 4 out
of 4 in 8s3e
Go back to
Potassium Binding Sites List in 8s3e
Potassium binding site 4 out
of 4 in the Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 4 of Structure of Rabbit SLO1 in Complex with GAMMA1/LRRC26 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:K1217
b:30.0
occ:1.00
|
O
|
D:VAL288
|
2.6
|
33.4
|
1.0
|
O
|
A:THR287
|
2.6
|
37.9
|
1.0
|
O
|
C:VAL288
|
2.6
|
33.4
|
1.0
|
O
|
B:THR287
|
2.6
|
37.9
|
1.0
|
O
|
D:THR287
|
2.7
|
37.9
|
1.0
|
O
|
A:VAL288
|
2.7
|
33.4
|
1.0
|
O
|
B:VAL288
|
2.7
|
33.4
|
1.0
|
O
|
C:THR287
|
2.8
|
37.9
|
1.0
|
K
|
B:K1217
|
3.2
|
30.0
|
1.0
|
C
|
D:VAL288
|
3.5
|
13.0
|
1.0
|
K
|
A:K1217
|
3.5
|
30.0
|
1.0
|
C
|
C:VAL288
|
3.5
|
13.0
|
1.0
|
C
|
A:VAL288
|
3.5
|
13.0
|
1.0
|
C
|
B:VAL288
|
3.5
|
13.0
|
1.0
|
C
|
A:THR287
|
3.7
|
15.0
|
1.0
|
C
|
B:THR287
|
3.7
|
15.0
|
1.0
|
C
|
D:THR287
|
3.8
|
15.0
|
1.0
|
C
|
C:THR287
|
3.9
|
15.0
|
1.0
|
CA
|
D:VAL288
|
4.0
|
15.9
|
1.0
|
CA
|
A:VAL288
|
4.0
|
15.9
|
1.0
|
CA
|
C:VAL288
|
4.0
|
15.9
|
1.0
|
CA
|
B:VAL288
|
4.0
|
15.9
|
1.0
|
N
|
D:VAL288
|
4.3
|
19.4
|
1.0
|
N
|
A:VAL288
|
4.3
|
19.4
|
1.0
|
N
|
B:VAL288
|
4.4
|
19.4
|
1.0
|
N
|
C:VAL288
|
4.4
|
19.4
|
1.0
|
N
|
D:GLY289
|
4.5
|
13.5
|
1.0
|
N
|
B:GLY289
|
4.5
|
13.5
|
1.0
|
N
|
A:GLY289
|
4.5
|
13.5
|
1.0
|
N
|
C:GLY289
|
4.6
|
13.5
|
1.0
|
CA
|
D:GLY289
|
4.8
|
12.2
|
1.0
|
CA
|
B:GLY289
|
4.8
|
12.2
|
1.0
|
CA
|
B:THR287
|
4.8
|
17.8
|
1.0
|
CA
|
A:GLY289
|
4.9
|
12.2
|
1.0
|
CA
|
A:THR287
|
4.9
|
17.8
|
1.0
|
CA
|
C:GLY289
|
4.9
|
12.2
|
1.0
|
CA
|
D:THR287
|
4.9
|
17.8
|
1.0
|
|
Reference:
M.Redhardt,
S.Raunser,
T.Raisch.
Cryo-Em Structure of the SLO1 Potassium Channel with the Auxiliary Gamma 1 Subunit Suggests A Mechanism For Depolarization-Independent Activation. Febs Lett. 2024.
ISSN: ISSN 0014-5793
PubMed: 38553946
DOI: 10.1002/1873-3468.14863
Page generated: Tue Aug 13 00:48:06 2024
|