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Potassium in PDB 8p4r: In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography

Other elements in 8p4r:

The structure of In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography also contains other interesting chemical elements:

Magnesium (Mg) 14 atoms

Potassium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 14;

Binding sites:

The binding sites of Potassium atom in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography (pdb code 8p4r). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 14 binding sites of Potassium where determined in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography, PDB code: 8p4r:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Potassium binding site 1 out of 14 in 8p4r

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Potassium binding site 1 out of 14 in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K603

b:1000.0
occ:1.00
O1A A:ATP601 2.8 1000.0 1.0
OG1 A:THR90 2.8 1000.0 1.0
O A:LYS51 2.8 1000.0 1.0
OG1 A:THR30 2.9 1000.0 1.0
O3G A:ATP601 2.9 1000.0 1.0
O A:THR30 3.0 1000.0 1.0
O3A A:ATP601 3.0 1000.0 1.0
O A:HOH712 3.5 1000.0 1.0
PA A:ATP601 3.5 1000.0 1.0
O1G A:ATP601 3.6 1000.0 1.0
C A:THR30 3.7 1000.0 1.0
CB A:THR30 3.7 1000.0 1.0
PG A:ATP601 3.7 1000.0 1.0
CB A:THR90 3.7 1000.0 1.0
N A:GLY53 3.8 1000.0 1.0
C A:LYS51 4.0 1000.0 1.0
NZ A:LYS51 4.0 1000.0 1.0
O3B A:ATP601 4.2 1000.0 1.0
PB A:ATP601 4.2 1000.0 1.0
N A:LEU31 4.3 1000.0 1.0
CG2 A:THR90 4.3 1000.0 1.0
CA A:THR30 4.4 1000.0 1.0
CA A:ASP52 4.4 1000.0 1.0
CA A:LEU31 4.4 1000.0 1.0
C A:ASP52 4.4 1000.0 1.0
CA A:GLY53 4.5 1000.0 1.0
CG A:LYS51 4.5 1000.0 1.0
O2A A:ATP601 4.5 1000.0 1.0
O5' A:ATP601 4.6 1000.0 1.0
O2B A:ATP601 4.6 1000.0 1.0
N A:ASP52 4.7 1000.0 1.0

Potassium binding site 2 out of 14 in 8p4r

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Potassium binding site 2 out of 14 in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K603

b:1000.0
occ:1.00
OG1 B:THR90 2.8 1000.0 1.0
O1A B:ATP601 2.8 1000.0 1.0
O B:LYS51 2.8 1000.0 1.0
O B:THR30 3.0 1000.0 1.0
O3G B:ATP601 3.0 1000.0 1.0
OG1 B:THR30 3.0 1000.0 1.0
O3A B:ATP601 3.0 1000.0 1.0
PA B:ATP601 3.5 1000.0 1.0
O B:HOH711 3.5 1000.0 1.0
C B:THR30 3.6 1000.0 1.0
O1G B:ATP601 3.7 1000.0 1.0
CB B:THR90 3.7 1000.0 1.0
PG B:ATP601 3.8 1000.0 1.0
CB B:THR30 3.8 1000.0 1.0
N B:GLY53 3.9 1000.0 1.0
C B:LYS51 4.0 1000.0 1.0
NZ B:LYS51 4.0 1000.0 1.0
O3B B:ATP601 4.2 1000.0 1.0
PB B:ATP601 4.2 1000.0 1.0
N B:LEU31 4.3 1000.0 1.0
CG2 B:THR90 4.3 1000.0 1.0
CA B:THR30 4.4 1000.0 1.0
CA B:LEU31 4.4 1000.0 1.0
CA B:ASP52 4.4 1000.0 1.0
C B:ASP52 4.4 1000.0 1.0
CA B:GLY53 4.5 1000.0 1.0
CG B:LYS51 4.5 1000.0 1.0
O2A B:ATP601 4.5 1000.0 1.0
O5' B:ATP601 4.6 1000.0 1.0
O2B B:ATP601 4.6 1000.0 1.0
N B:ASP52 4.7 1000.0 1.0

Potassium binding site 3 out of 14 in 8p4r

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Potassium binding site 3 out of 14 in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K603

b:1000.0
occ:1.00
O1A C:ATP601 2.8 1000.0 1.0
OG1 C:THR90 2.8 1000.0 1.0
O C:LYS51 2.8 1000.0 1.0
OG1 C:THR30 2.9 1000.0 1.0
O C:THR30 2.9 1000.0 1.0
O3G C:ATP601 3.0 1000.0 1.0
O3A C:ATP601 3.0 1000.0 1.0
PA C:ATP601 3.4 1000.0 1.0
O C:HOH2009 3.4 1000.0 1.0
C C:THR30 3.6 1000.0 1.0
O1G C:ATP601 3.7 1000.0 1.0
CB C:THR30 3.7 1000.0 1.0
CB C:THR90 3.7 1000.0 1.0
PG C:ATP601 3.8 1000.0 1.0
N C:GLY53 3.9 1000.0 1.0
NZ C:LYS51 4.0 1000.0 1.0
C C:LYS51 4.0 1000.0 1.0
O3B C:ATP601 4.2 1000.0 1.0
PB C:ATP601 4.2 1000.0 1.0
N C:LEU31 4.3 1000.0 1.0
CA C:THR30 4.3 1000.0 1.0
CG2 C:THR90 4.3 1000.0 1.0
CA C:LEU31 4.4 1000.0 1.0
CA C:ASP52 4.5 1000.0 1.0
CG C:LYS51 4.5 1000.0 1.0
C C:ASP52 4.5 1000.0 1.0
CA C:GLY53 4.5 1000.0 1.0
O2A C:ATP601 4.5 1000.0 1.0
O5' C:ATP601 4.5 1000.0 1.0
O2B C:ATP601 4.6 1000.0 1.0
N C:ASP52 4.7 1000.0 1.0

Potassium binding site 4 out of 14 in 8p4r

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Potassium binding site 4 out of 14 in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
D:K603

b:1000.0
occ:1.00
OG1 D:THR90 2.7 1000.0 1.0
O1A D:ATP601 2.8 1000.0 1.0
O D:LYS51 2.8 1000.0 1.0
O D:THR30 2.9 1000.0 1.0
OG1 D:THR30 2.9 1000.0 1.0
O3G D:ATP601 3.0 1000.0 1.0
O3A D:ATP601 3.1 1000.0 1.0
O D:HOH2010 3.5 1000.0 1.0
PA D:ATP601 3.5 1000.0 1.0
C D:THR30 3.6 1000.0 1.0
CB D:THR90 3.7 1000.0 1.0
O1G D:ATP601 3.7 1000.0 1.0
CB D:THR30 3.7 1000.0 1.0
PG D:ATP601 3.8 1000.0 1.0
NZ D:LYS51 3.9 1000.0 1.0
N D:GLY53 3.9 1000.0 1.0
C D:LYS51 4.0 1000.0 1.0
O3B D:ATP601 4.2 1000.0 1.0
N D:LEU31 4.3 1000.0 1.0
CG2 D:THR90 4.3 1000.0 1.0
PB D:ATP601 4.3 1000.0 1.0
CA D:THR30 4.3 1000.0 1.0
CA D:LEU31 4.4 1000.0 1.0
CA D:ASP52 4.4 1000.0 1.0
CG D:LYS51 4.4 1000.0 1.0
C D:ASP52 4.5 1000.0 1.0
CA D:GLY53 4.5 1000.0 1.0
O5' D:ATP601 4.5 1000.0 1.0
O2A D:ATP601 4.6 1000.0 1.0
O2B D:ATP601 4.7 1000.0 1.0
N D:ASP52 4.7 1000.0 1.0
CE D:LYS51 5.0 1000.0 1.0

Potassium binding site 5 out of 14 in 8p4r

Go back to Potassium Binding Sites List in 8p4r
Potassium binding site 5 out of 14 in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
E:K603

b:1000.0
occ:1.00
O1A E:ATP601 2.8 1000.0 1.0
OG1 E:THR90 2.8 1000.0 1.0
O E:LYS51 2.8 1000.0 1.0
O3G E:ATP601 2.9 1000.0 1.0
OG1 E:THR30 2.9 1000.0 1.0
O E:THR30 2.9 1000.0 1.0
O3A E:ATP601 3.1 1000.0 1.0
O E:HOH704 3.3 1000.0 1.0
PA E:ATP601 3.5 1000.0 1.0
O1G E:ATP601 3.5 1000.0 1.0
CB E:THR30 3.6 1000.0 1.0
C E:THR30 3.6 1000.0 1.0
PG E:ATP601 3.7 1000.0 1.0
N E:GLY53 3.7 1000.0 1.0
CB E:THR90 3.8 1000.0 1.0
C E:LYS51 4.0 1000.0 1.0
NZ E:LYS51 4.1 1000.0 1.0
O3B E:ATP601 4.1 1000.0 1.0
PB E:ATP601 4.2 1000.0 1.0
CA E:THR30 4.3 1000.0 1.0
CA E:ASP52 4.4 1000.0 1.0
C E:ASP52 4.4 1000.0 1.0
CA E:GLY53 4.4 1000.0 1.0
N E:LEU31 4.4 1000.0 1.0
CG2 E:THR90 4.4 1000.0 1.0
O2A E:ATP601 4.5 1000.0 1.0
CA E:LEU31 4.6 1000.0 1.0
O5' E:ATP601 4.6 1000.0 1.0
CG E:LYS51 4.6 1000.0 1.0
N E:ASP52 4.7 1000.0 1.0
O2B E:ATP601 4.7 1000.0 1.0
CG2 E:THR30 4.9 1000.0 1.0

Potassium binding site 6 out of 14 in 8p4r

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Potassium binding site 6 out of 14 in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
F:K603

b:1000.0
occ:1.00
O1A F:ATP601 2.8 1000.0 1.0
OG1 F:THR90 2.8 1000.0 1.0
O F:LYS51 2.8 1000.0 1.0
O3G F:ATP601 2.9 1000.0 1.0
O F:THR30 2.9 1000.0 1.0
OG1 F:THR30 3.0 1000.0 1.0
O3A F:ATP601 3.0 1000.0 1.0
O F:HOH712 3.4 1000.0 1.0
PA F:ATP601 3.5 1000.0 1.0
O1G F:ATP601 3.6 1000.0 1.0
C F:THR30 3.6 1000.0 1.0
PG F:ATP601 3.7 1000.0 1.0
CB F:THR90 3.8 1000.0 1.0
CB F:THR30 3.8 1000.0 1.0
N F:GLY53 3.9 1000.0 1.0
NZ F:LYS51 3.9 1000.0 1.0
C F:LYS51 4.0 1000.0 1.0
O3B F:ATP601 4.1 1000.0 1.0
PB F:ATP601 4.2 1000.0 1.0
N F:LEU31 4.3 1000.0 1.0
CG2 F:THR90 4.4 1000.0 1.0
CA F:THR30 4.4 1000.0 1.0
CA F:ASP52 4.4 1000.0 1.0
CA F:LEU31 4.4 1000.0 1.0
C F:ASP52 4.5 1000.0 1.0
CG F:LYS51 4.5 1000.0 1.0
CA F:GLY53 4.5 1000.0 1.0
O2A F:ATP601 4.5 1000.0 1.0
O5' F:ATP601 4.6 1000.0 1.0
O2B F:ATP601 4.6 1000.0 1.0
N F:ASP52 4.7 1000.0 1.0

Potassium binding site 7 out of 14 in 8p4r

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Potassium binding site 7 out of 14 in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 7 of In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
G:K603

b:1000.0
occ:1.00
O1A G:ATP601 2.8 1000.0 1.0
OG1 G:THR90 2.8 1000.0 1.0
O G:LYS51 2.8 1000.0 1.0
OG1 G:THR30 2.9 1000.0 1.0
O G:THR30 2.9 1000.0 1.0
O3G G:ATP601 3.0 1000.0 1.0
O3A G:ATP601 3.1 1000.0 1.0
O G:HOH710 3.5 1000.0 1.0
PA G:ATP601 3.5 1000.0 1.0
C G:THR30 3.6 1000.0 1.0
O1G G:ATP601 3.7 1000.0 1.0
CB G:THR30 3.7 1000.0 1.0
CB G:THR90 3.7 1000.0 1.0
PG G:ATP601 3.8 1000.0 1.0
N G:GLY53 3.9 1000.0 1.0
C G:LYS51 4.0 1000.0 1.0
NZ G:LYS51 4.0 1000.0 1.0
O3B G:ATP601 4.2 1000.0 1.0
N G:LEU31 4.2 1000.0 1.0
PB G:ATP601 4.3 1000.0 1.0
CA G:THR30 4.3 1000.0 1.0
CG2 G:THR90 4.3 1000.0 1.0
CA G:LEU31 4.3 1000.0 1.0
CA G:ASP52 4.4 1000.0 1.0
C G:ASP52 4.5 1000.0 1.0
CA G:GLY53 4.5 1000.0 1.0
CG G:LYS51 4.5 1000.0 1.0
O5' G:ATP601 4.5 1000.0 1.0
O2A G:ATP601 4.6 1000.0 1.0
O2B G:ATP601 4.6 1000.0 1.0
N G:ASP52 4.7 1000.0 1.0

Potassium binding site 8 out of 14 in 8p4r

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Potassium binding site 8 out of 14 in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 8 of In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
H:K603

b:1000.0
occ:1.00
O1A H:ATP601 2.8 1000.0 1.0
OG1 H:THR90 2.8 1000.0 1.0
O H:LYS51 2.8 1000.0 1.0
O3G H:ATP601 2.9 1000.0 1.0
OG1 H:THR30 2.9 1000.0 1.0
O3A H:ATP601 3.1 1000.0 1.0
O H:THR30 3.2 1000.0 1.0
O H:HOH2011 3.3 1000.0 1.0
O1G H:ATP601 3.4 1000.0 1.0
PA H:ATP601 3.5 1000.0 1.0
N H:GLY53 3.6 1000.0 1.0
PG H:ATP601 3.6 1000.0 1.0
CB H:THR30 3.7 1000.0 1.0
C H:THR30 3.9 1000.0 1.0
CB H:THR90 3.9 1000.0 1.0
NZ H:LYS51 4.0 1000.0 1.0
C H:LYS51 4.0 1000.0 1.0
O3B H:ATP601 4.2 1000.0 1.0
CA H:ASP52 4.2 1000.0 1.0
C H:ASP52 4.2 1000.0 1.0
CA H:GLY53 4.2 1000.0 1.0
PB H:ATP601 4.3 1000.0 1.0
CA H:THR30 4.5 1000.0 1.0
CG2 H:THR90 4.5 1000.0 1.0
O2A H:ATP601 4.5 1000.0 1.0
N H:ASP52 4.6 1000.0 1.0
CG H:LYS51 4.6 1000.0 1.0
N H:LEU31 4.6 1000.0 1.0
O5' H:ATP601 4.7 1000.0 1.0
CA H:LEU31 4.8 1000.0 1.0
O2B H:ATP601 4.8 1000.0 1.0
OD1 H:ASP52 4.9 1000.0 1.0
CG2 H:THR30 5.0 1000.0 1.0

Potassium binding site 9 out of 14 in 8p4r

Go back to Potassium Binding Sites List in 8p4r
Potassium binding site 9 out of 14 in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 9 of In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
I:K603

b:1000.0
occ:1.00
O1A I:ATP601 2.8 1000.0 1.0
OG1 I:THR90 2.8 1000.0 1.0
O I:LYS51 2.8 1000.0 1.0
OG1 I:THR30 2.9 1000.0 1.0
O3G I:ATP601 2.9 1000.0 1.0
O I:THR30 3.0 1000.0 1.0
O3A I:ATP601 3.0 1000.0 1.0
O I:HOH709 3.4 1000.0 1.0
PA I:ATP601 3.5 1000.0 1.0
C I:THR30 3.6 1000.0 1.0
O1G I:ATP601 3.6 1000.0 1.0
CB I:THR30 3.7 1000.0 1.0
PG I:ATP601 3.7 1000.0 1.0
CB I:THR90 3.8 1000.0 1.0
N I:GLY53 3.8 1000.0 1.0
C I:LYS51 4.0 1000.0 1.0
NZ I:LYS51 4.0 1000.0 1.0
O3B I:ATP601 4.2 1000.0 1.0
PB I:ATP601 4.2 1000.0 1.0
N I:LEU31 4.3 1000.0 1.0
CA I:THR30 4.3 1000.0 1.0
CG2 I:THR90 4.4 1000.0 1.0
CA I:LEU31 4.4 1000.0 1.0
CA I:ASP52 4.4 1000.0 1.0
C I:ASP52 4.4 1000.0 1.0
CA I:GLY53 4.5 1000.0 1.0
CG I:LYS51 4.5 1000.0 1.0
O5' I:ATP601 4.5 1000.0 1.0
O2A I:ATP601 4.5 1000.0 1.0
O2B I:ATP601 4.6 1000.0 1.0
N I:ASP52 4.7 1000.0 1.0

Potassium binding site 10 out of 14 in 8p4r

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Potassium binding site 10 out of 14 in the In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 10 of In Situ Structure Average of GROEL14-GROES14 Complexes in Escherichia Coli Cytosol Obtained By Cryo Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
J:K603

b:1000.0
occ:1.00
OG1 J:THR90 2.8 1000.0 1.0
O1A J:ATP601 2.8 1000.0 1.0
O J:LYS51 2.8 1000.0 1.0
OG1 J:THR30 2.9 1000.0 1.0
O J:THR30 3.0 1000.0 1.0
O3G J:ATP601 3.0 1000.0 1.0
O3A J:ATP601 3.1 1000.0 1.0
PA J:ATP601 3.5 1000.0 1.0
O J:HOH712 3.5 1000.0 1.0
C J:THR30 3.6 1000.0 1.0
O1G J:ATP601 3.7 1000.0 1.0
CB J:THR30 3.7 1000.0 1.0
CB J:THR90 3.7 1000.0 1.0
PG J:ATP601 3.8 1000.0 1.0
N J:GLY53 3.8 1000.0 1.0
C J:LYS51 4.0 1000.0 1.0
NZ J:LYS51 4.0 1000.0 1.0
O3B J:ATP601 4.2 1000.0 1.0
PB J:ATP601 4.3 1000.0 1.0
N J:LEU31 4.3 1000.0 1.0
CG2 J:THR90 4.3 1000.0 1.0
CA J:THR30 4.3 1000.0 1.0
CA J:ASP52 4.4 1000.0 1.0
CA J:LEU31 4.4 1000.0 1.0
C J:ASP52 4.4 1000.0 1.0
CG J:LYS51 4.5 1000.0 1.0
CA J:GLY53 4.5 1000.0 1.0
O2A J:ATP601 4.6 1000.0 1.0
O5' J:ATP601 4.6 1000.0 1.0
N J:ASP52 4.7 1000.0 1.0
O2B J:ATP601 4.7 1000.0 1.0

Reference:

J.Wagner, A.I.Caravajal, F.Beck, A.Bracher, W.Wan, S.Bohn, R.Koerner, W.Baumeister, R.Fernandez-Busnadiego, F.U.Hartl. Visualizing Chaperonin Function in Situ By Cryo-Electron Tomography Nature 2024.
ISSN: ESSN 1476-4687
Page generated: Tue Aug 13 00:23:55 2024

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