Potassium in PDB 8k1u: Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta
Other elements in 8k1u:
The structure of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta also contains other interesting chemical elements:
Potassium Binding Sites:
The binding sites of Potassium atom in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta
(pdb code 8k1u). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the
Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, PDB code: 8k1u:
Jump to Potassium binding site number:
1;
2;
3;
4;
Potassium binding site 1 out
of 4 in 8k1u
Go back to
Potassium Binding Sites List in 8k1u
Potassium binding site 1 out
of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:K501
b:9.7
occ:1.00
|
O
|
I:ASN175
|
2.8
|
17.5
|
1.0
|
O
|
I:THR390
|
2.8
|
6.7
|
1.0
|
O
|
I:THR61
|
2.8
|
10.2
|
1.0
|
O
|
I:ALA279
|
2.8
|
8.7
|
1.0
|
O
|
I:VAL391
|
2.8
|
6.4
|
1.0
|
O
|
I:ALA176
|
2.9
|
11.5
|
1.0
|
O
|
I:THR278
|
2.9
|
7.9
|
1.0
|
O
|
I:VAL60
|
3.2
|
11.8
|
1.0
|
C
|
I:ALA176
|
3.3
|
11.5
|
1.0
|
C
|
I:ASN175
|
3.4
|
17.5
|
1.0
|
CA
|
I:ALA176
|
3.5
|
11.5
|
1.0
|
C
|
I:THR61
|
3.5
|
10.2
|
1.0
|
C
|
I:VAL391
|
3.5
|
6.4
|
1.0
|
C
|
I:ALA279
|
3.5
|
8.7
|
1.0
|
N
|
I:ALA176
|
3.8
|
11.5
|
1.0
|
C
|
I:THR390
|
3.8
|
6.7
|
1.0
|
CA
|
I:VAL391
|
3.8
|
6.4
|
1.0
|
CA
|
I:THR61
|
3.8
|
10.2
|
1.0
|
C
|
I:THR278
|
4.0
|
7.9
|
1.0
|
CA
|
I:ALA279
|
4.0
|
8.7
|
1.0
|
C
|
I:VAL60
|
4.1
|
11.8
|
1.0
|
N
|
I:VAL391
|
4.2
|
6.4
|
1.0
|
N
|
I:GLY177
|
4.2
|
16.6
|
1.0
|
N
|
I:THR61
|
4.3
|
10.2
|
1.0
|
N
|
I:GLY280
|
4.5
|
9.9
|
1.0
|
N
|
I:ALA279
|
4.5
|
8.7
|
1.0
|
N
|
I:GLY62
|
4.6
|
12.8
|
1.0
|
N
|
I:GLY392
|
4.6
|
8.7
|
1.0
|
CA
|
I:ASN175
|
4.6
|
17.5
|
1.0
|
CB
|
I:ASN175
|
4.8
|
17.5
|
1.0
|
CA
|
I:GLY280
|
4.8
|
9.9
|
1.0
|
CA
|
I:GLY177
|
4.8
|
16.6
|
1.0
|
CA
|
I:THR390
|
5.0
|
6.7
|
1.0
|
OG1
|
I:THR278
|
5.0
|
7.9
|
1.0
|
|
Potassium binding site 2 out
of 4 in 8k1u
Go back to
Potassium Binding Sites List in 8k1u
Potassium binding site 2 out
of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:K501
b:9.6
occ:1.00
|
O
|
J:ASN175
|
2.8
|
10.2
|
1.0
|
O
|
J:THR390
|
2.8
|
5.5
|
1.0
|
O
|
J:THR61
|
2.8
|
7.6
|
1.0
|
O
|
J:ALA279
|
2.8
|
9.4
|
1.0
|
O
|
J:VAL391
|
2.8
|
5.7
|
1.0
|
O
|
J:ALA176
|
2.9
|
10.9
|
1.0
|
O
|
J:THR278
|
2.9
|
7.8
|
1.0
|
O
|
J:VAL60
|
3.2
|
8.3
|
1.0
|
C
|
J:ALA176
|
3.3
|
10.9
|
1.0
|
C
|
J:ASN175
|
3.4
|
10.2
|
1.0
|
CA
|
J:ALA176
|
3.5
|
10.9
|
1.0
|
C
|
J:THR61
|
3.5
|
7.6
|
1.0
|
C
|
J:VAL391
|
3.5
|
5.7
|
1.0
|
C
|
J:ALA279
|
3.5
|
9.4
|
1.0
|
N
|
J:ALA176
|
3.8
|
10.9
|
1.0
|
C
|
J:THR390
|
3.8
|
5.5
|
1.0
|
CA
|
J:VAL391
|
3.8
|
5.7
|
1.0
|
CA
|
J:THR61
|
3.8
|
7.6
|
1.0
|
C
|
J:THR278
|
4.0
|
7.8
|
1.0
|
CA
|
J:ALA279
|
4.0
|
9.4
|
1.0
|
C
|
J:VAL60
|
4.1
|
8.3
|
1.0
|
N
|
J:VAL391
|
4.2
|
5.7
|
1.0
|
N
|
J:GLY177
|
4.2
|
14.5
|
1.0
|
N
|
J:THR61
|
4.3
|
7.6
|
1.0
|
N
|
J:GLY280
|
4.5
|
10.9
|
1.0
|
N
|
J:ALA279
|
4.5
|
9.4
|
1.0
|
N
|
J:GLY62
|
4.6
|
11.0
|
1.0
|
N
|
J:GLY392
|
4.6
|
9.2
|
1.0
|
CA
|
J:ASN175
|
4.6
|
10.2
|
1.0
|
CB
|
J:ASN175
|
4.8
|
10.2
|
1.0
|
CA
|
J:GLY280
|
4.8
|
10.9
|
1.0
|
CA
|
J:GLY177
|
4.8
|
14.5
|
1.0
|
CA
|
J:THR390
|
5.0
|
5.5
|
1.0
|
OG1
|
J:THR278
|
5.0
|
7.8
|
1.0
|
|
Potassium binding site 3 out
of 4 in 8k1u
Go back to
Potassium Binding Sites List in 8k1u
Potassium binding site 3 out
of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 3 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:K501
b:8.0
occ:1.00
|
O
|
K:ASN175
|
2.8
|
9.8
|
1.0
|
O
|
K:THR390
|
2.8
|
4.4
|
1.0
|
O
|
K:THR61
|
2.8
|
6.7
|
1.0
|
O
|
K:ALA279
|
2.8
|
9.5
|
1.0
|
O
|
K:VAL391
|
2.8
|
5.1
|
1.0
|
O
|
K:ALA176
|
2.9
|
10.5
|
1.0
|
O
|
K:THR278
|
2.9
|
8.2
|
1.0
|
O
|
K:VAL60
|
3.2
|
7.5
|
1.0
|
C
|
K:ALA176
|
3.3
|
10.5
|
1.0
|
C
|
K:ASN175
|
3.4
|
9.8
|
1.0
|
C
|
K:THR61
|
3.5
|
6.7
|
1.0
|
CA
|
K:ALA176
|
3.5
|
10.5
|
1.0
|
C
|
K:VAL391
|
3.5
|
5.1
|
1.0
|
C
|
K:ALA279
|
3.5
|
9.5
|
1.0
|
N
|
K:ALA176
|
3.8
|
10.5
|
1.0
|
C
|
K:THR390
|
3.8
|
4.4
|
1.0
|
CA
|
K:VAL391
|
3.8
|
5.1
|
1.0
|
CA
|
K:THR61
|
3.8
|
6.7
|
1.0
|
C
|
K:THR278
|
4.0
|
8.2
|
1.0
|
CA
|
K:ALA279
|
4.0
|
9.5
|
1.0
|
C
|
K:VAL60
|
4.1
|
7.5
|
1.0
|
N
|
K:VAL391
|
4.2
|
5.1
|
1.0
|
N
|
K:GLY177
|
4.2
|
14.5
|
1.0
|
N
|
K:THR61
|
4.3
|
6.7
|
1.0
|
N
|
K:GLY280
|
4.5
|
11.2
|
1.0
|
N
|
K:ALA279
|
4.5
|
9.5
|
1.0
|
N
|
K:GLY62
|
4.6
|
10.3
|
1.0
|
N
|
K:GLY392
|
4.6
|
8.4
|
1.0
|
CA
|
K:ASN175
|
4.6
|
9.8
|
1.0
|
CB
|
K:ASN175
|
4.8
|
9.8
|
1.0
|
CA
|
K:GLY280
|
4.8
|
11.2
|
1.0
|
CA
|
K:GLY177
|
4.8
|
14.5
|
1.0
|
CA
|
K:THR390
|
5.0
|
4.4
|
1.0
|
OG1
|
K:THR278
|
5.0
|
8.2
|
1.0
|
|
Potassium binding site 4 out
of 4 in 8k1u
Go back to
Potassium Binding Sites List in 8k1u
Potassium binding site 4 out
of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 4 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:K501
b:9.7
occ:1.00
|
O
|
L:ASN175
|
2.8
|
14.9
|
1.0
|
O
|
L:THR390
|
2.8
|
6.2
|
1.0
|
O
|
L:THR61
|
2.8
|
10.3
|
1.0
|
O
|
L:ALA279
|
2.8
|
8.4
|
1.0
|
O
|
L:VAL391
|
2.8
|
6.1
|
1.0
|
O
|
L:ALA176
|
2.9
|
11.4
|
1.0
|
O
|
L:THR278
|
2.9
|
7.8
|
1.0
|
O
|
L:VAL60
|
3.2
|
11.9
|
1.0
|
C
|
L:ALA176
|
3.3
|
11.4
|
1.0
|
C
|
L:ASN175
|
3.4
|
14.9
|
1.0
|
CA
|
L:ALA176
|
3.5
|
11.4
|
1.0
|
C
|
L:THR61
|
3.5
|
10.3
|
1.0
|
C
|
L:VAL391
|
3.5
|
6.1
|
1.0
|
C
|
L:ALA279
|
3.5
|
8.4
|
1.0
|
N
|
L:ALA176
|
3.8
|
11.4
|
1.0
|
C
|
L:THR390
|
3.8
|
6.2
|
1.0
|
CA
|
L:VAL391
|
3.8
|
6.1
|
1.0
|
CA
|
L:THR61
|
3.8
|
10.3
|
1.0
|
C
|
L:THR278
|
4.0
|
7.8
|
1.0
|
CA
|
L:ALA279
|
4.0
|
8.4
|
1.0
|
C
|
L:VAL60
|
4.1
|
11.9
|
1.0
|
N
|
L:VAL391
|
4.2
|
6.1
|
1.0
|
N
|
L:GLY177
|
4.2
|
16.2
|
1.0
|
N
|
L:THR61
|
4.3
|
10.3
|
1.0
|
N
|
L:GLY280
|
4.5
|
9.6
|
1.0
|
N
|
L:ALA279
|
4.5
|
8.4
|
1.0
|
N
|
L:GLY62
|
4.6
|
13.2
|
1.0
|
N
|
L:GLY392
|
4.6
|
8.5
|
1.0
|
CA
|
L:ASN175
|
4.6
|
14.9
|
1.0
|
CB
|
L:ASN175
|
4.8
|
14.9
|
1.0
|
CA
|
L:GLY280
|
4.8
|
9.6
|
1.0
|
CA
|
L:GLY177
|
4.8
|
16.2
|
1.0
|
CA
|
L:THR390
|
5.0
|
6.2
|
1.0
|
OG1
|
L:THR278
|
5.0
|
7.8
|
1.0
|
|
Reference:
Y.K.Chang,
W.T.Chiang,
N.J.Hu,
M.D.Tsai.
Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta To Be Published.
Page generated: Tue Aug 13 00:10:35 2024
|