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Potassium in PDB 8k1u: Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta

Other elements in 8k1u:

The structure of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta also contains other interesting chemical elements:

Sodium (Na) 4 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta (pdb code 8k1u). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, PDB code: 8k1u:
Jump to Potassium binding site number: 1; 2; 3; 4;

Potassium binding site 1 out of 4 in 8k1u

Go back to Potassium Binding Sites List in 8k1u
Potassium binding site 1 out of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta within 5.0Å range:
probe atom residue distance (Å) B Occ
I:K501

b:9.7
occ:1.00
O I:ASN175 2.8 17.5 1.0
O I:THR390 2.8 6.7 1.0
O I:THR61 2.8 10.2 1.0
O I:ALA279 2.8 8.7 1.0
O I:VAL391 2.8 6.4 1.0
O I:ALA176 2.9 11.5 1.0
O I:THR278 2.9 7.9 1.0
O I:VAL60 3.2 11.8 1.0
C I:ALA176 3.3 11.5 1.0
C I:ASN175 3.4 17.5 1.0
CA I:ALA176 3.5 11.5 1.0
C I:THR61 3.5 10.2 1.0
C I:VAL391 3.5 6.4 1.0
C I:ALA279 3.5 8.7 1.0
N I:ALA176 3.8 11.5 1.0
C I:THR390 3.8 6.7 1.0
CA I:VAL391 3.8 6.4 1.0
CA I:THR61 3.8 10.2 1.0
C I:THR278 4.0 7.9 1.0
CA I:ALA279 4.0 8.7 1.0
C I:VAL60 4.1 11.8 1.0
N I:VAL391 4.2 6.4 1.0
N I:GLY177 4.2 16.6 1.0
N I:THR61 4.3 10.2 1.0
N I:GLY280 4.5 9.9 1.0
N I:ALA279 4.5 8.7 1.0
N I:GLY62 4.6 12.8 1.0
N I:GLY392 4.6 8.7 1.0
CA I:ASN175 4.6 17.5 1.0
CB I:ASN175 4.8 17.5 1.0
CA I:GLY280 4.8 9.9 1.0
CA I:GLY177 4.8 16.6 1.0
CA I:THR390 5.0 6.7 1.0
OG1 I:THR278 5.0 7.9 1.0

Potassium binding site 2 out of 4 in 8k1u

Go back to Potassium Binding Sites List in 8k1u
Potassium binding site 2 out of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta within 5.0Å range:
probe atom residue distance (Å) B Occ
J:K501

b:9.6
occ:1.00
O J:ASN175 2.8 10.2 1.0
O J:THR390 2.8 5.5 1.0
O J:THR61 2.8 7.6 1.0
O J:ALA279 2.8 9.4 1.0
O J:VAL391 2.8 5.7 1.0
O J:ALA176 2.9 10.9 1.0
O J:THR278 2.9 7.8 1.0
O J:VAL60 3.2 8.3 1.0
C J:ALA176 3.3 10.9 1.0
C J:ASN175 3.4 10.2 1.0
CA J:ALA176 3.5 10.9 1.0
C J:THR61 3.5 7.6 1.0
C J:VAL391 3.5 5.7 1.0
C J:ALA279 3.5 9.4 1.0
N J:ALA176 3.8 10.9 1.0
C J:THR390 3.8 5.5 1.0
CA J:VAL391 3.8 5.7 1.0
CA J:THR61 3.8 7.6 1.0
C J:THR278 4.0 7.8 1.0
CA J:ALA279 4.0 9.4 1.0
C J:VAL60 4.1 8.3 1.0
N J:VAL391 4.2 5.7 1.0
N J:GLY177 4.2 14.5 1.0
N J:THR61 4.3 7.6 1.0
N J:GLY280 4.5 10.9 1.0
N J:ALA279 4.5 9.4 1.0
N J:GLY62 4.6 11.0 1.0
N J:GLY392 4.6 9.2 1.0
CA J:ASN175 4.6 10.2 1.0
CB J:ASN175 4.8 10.2 1.0
CA J:GLY280 4.8 10.9 1.0
CA J:GLY177 4.8 14.5 1.0
CA J:THR390 5.0 5.5 1.0
OG1 J:THR278 5.0 7.8 1.0

Potassium binding site 3 out of 4 in 8k1u

Go back to Potassium Binding Sites List in 8k1u
Potassium binding site 3 out of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta within 5.0Å range:
probe atom residue distance (Å) B Occ
K:K501

b:8.0
occ:1.00
O K:ASN175 2.8 9.8 1.0
O K:THR390 2.8 4.4 1.0
O K:THR61 2.8 6.7 1.0
O K:ALA279 2.8 9.5 1.0
O K:VAL391 2.8 5.1 1.0
O K:ALA176 2.9 10.5 1.0
O K:THR278 2.9 8.2 1.0
O K:VAL60 3.2 7.5 1.0
C K:ALA176 3.3 10.5 1.0
C K:ASN175 3.4 9.8 1.0
C K:THR61 3.5 6.7 1.0
CA K:ALA176 3.5 10.5 1.0
C K:VAL391 3.5 5.1 1.0
C K:ALA279 3.5 9.5 1.0
N K:ALA176 3.8 10.5 1.0
C K:THR390 3.8 4.4 1.0
CA K:VAL391 3.8 5.1 1.0
CA K:THR61 3.8 6.7 1.0
C K:THR278 4.0 8.2 1.0
CA K:ALA279 4.0 9.5 1.0
C K:VAL60 4.1 7.5 1.0
N K:VAL391 4.2 5.1 1.0
N K:GLY177 4.2 14.5 1.0
N K:THR61 4.3 6.7 1.0
N K:GLY280 4.5 11.2 1.0
N K:ALA279 4.5 9.5 1.0
N K:GLY62 4.6 10.3 1.0
N K:GLY392 4.6 8.4 1.0
CA K:ASN175 4.6 9.8 1.0
CB K:ASN175 4.8 9.8 1.0
CA K:GLY280 4.8 11.2 1.0
CA K:GLY177 4.8 14.5 1.0
CA K:THR390 5.0 4.4 1.0
OG1 K:THR278 5.0 8.2 1.0

Potassium binding site 4 out of 4 in 8k1u

Go back to Potassium Binding Sites List in 8k1u
Potassium binding site 4 out of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta within 5.0Å range:
probe atom residue distance (Å) B Occ
L:K501

b:9.7
occ:1.00
O L:ASN175 2.8 14.9 1.0
O L:THR390 2.8 6.2 1.0
O L:THR61 2.8 10.3 1.0
O L:ALA279 2.8 8.4 1.0
O L:VAL391 2.8 6.1 1.0
O L:ALA176 2.9 11.4 1.0
O L:THR278 2.9 7.8 1.0
O L:VAL60 3.2 11.9 1.0
C L:ALA176 3.3 11.4 1.0
C L:ASN175 3.4 14.9 1.0
CA L:ALA176 3.5 11.4 1.0
C L:THR61 3.5 10.3 1.0
C L:VAL391 3.5 6.1 1.0
C L:ALA279 3.5 8.4 1.0
N L:ALA176 3.8 11.4 1.0
C L:THR390 3.8 6.2 1.0
CA L:VAL391 3.8 6.1 1.0
CA L:THR61 3.8 10.3 1.0
C L:THR278 4.0 7.8 1.0
CA L:ALA279 4.0 8.4 1.0
C L:VAL60 4.1 11.9 1.0
N L:VAL391 4.2 6.1 1.0
N L:GLY177 4.2 16.2 1.0
N L:THR61 4.3 10.3 1.0
N L:GLY280 4.5 9.6 1.0
N L:ALA279 4.5 8.4 1.0
N L:GLY62 4.6 13.2 1.0
N L:GLY392 4.6 8.5 1.0
CA L:ASN175 4.6 14.9 1.0
CB L:ASN175 4.8 14.9 1.0
CA L:GLY280 4.8 9.6 1.0
CA L:GLY177 4.8 16.2 1.0
CA L:THR390 5.0 6.2 1.0
OG1 L:THR278 5.0 7.8 1.0

Reference:

Y.K.Chang, W.T.Chiang, N.J.Hu, M.D.Tsai. Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta To Be Published.
Page generated: Tue Aug 13 00:10:35 2024

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