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Potassium in PDB 8jah: Crystal Structure of Human CLEC12A C-Type Lectin Domain

Protein crystallography data

The structure of Crystal Structure of Human CLEC12A C-Type Lectin Domain, PDB code: 8jah was solved by Q.Lei, H.Tang, X.Dong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.01 / 2.58
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 50.012, 50.012, 367.627, 90, 90, 120
R / Rfree (%) 20.5 / 26.3

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of Human CLEC12A C-Type Lectin Domain (pdb code 8jah). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Structure of Human CLEC12A C-Type Lectin Domain, PDB code: 8jah:

Potassium binding site 1 out of 1 in 8jah

Go back to Potassium Binding Sites List in 8jah
Potassium binding site 1 out of 1 in the Crystal Structure of Human CLEC12A C-Type Lectin Domain


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Human CLEC12A C-Type Lectin Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K302

b:61.5
occ:1.00
HH21 A:ARG201 2.8 58.4 1.0
HE A:ARG201 3.3 39.4 1.0
NH2 A:ARG201 3.6 47.5 1.0
NE A:ARG201 4.0 31.6 1.0
HH22 A:ARG201 4.2 58.4 1.0
CZ A:ARG201 4.3 32.1 1.0

Reference:

H.Tang, Y.Xiao, L.Qian, Z.Wang, M.Lu, N.Yao, T.Zhou, F.Tian, L.Cao, P.Zheng, X.Dong. Mechanistic Insights Into the C-Type Lectin Receptor CLEC12A-Mediated Immune Recognition of Monosodium Urate Crystal. J.Biol.Chem. 05765 2024.
ISSN: ESSN 1083-351X
PubMed: 38367667
DOI: 10.1016/J.JBC.2024.105765
Page generated: Tue Aug 13 00:04:43 2024

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