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Potassium in PDB 8fi1: Structure of Lettuce C20G Bound to Dfho

Protein crystallography data

The structure of Structure of Lettuce C20G Bound to Dfho, PDB code: 8fi1 was solved by L.F.M.Passalacqua, A.R.Ferre-D'amare, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.81 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 25.815, 46.994, 120.981, 90, 90, 90
R / Rfree (%) 21.9 / 27.1

Other elements in 8fi1:

The structure of Structure of Lettuce C20G Bound to Dfho also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms
Fluorine (F) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Structure of Lettuce C20G Bound to Dfho (pdb code 8fi1). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Structure of Lettuce C20G Bound to Dfho, PDB code: 8fi1:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 8fi1

Go back to Potassium Binding Sites List in 8fi1
Potassium binding site 1 out of 2 in the Structure of Lettuce C20G Bound to Dfho


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of Lettuce C20G Bound to Dfho within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K101

b:45.6
occ:1.00
O6 A:DG9 2.7 41.6 1.0
O6 A:DG45 2.8 42.1 1.0
O6 A:DG24 2.8 42.2 1.0
O6 A:DG19 2.9 41.1 1.0
O6 A:DG25 3.0 41.9 1.0
O6 A:DG18 3.0 43.8 1.0
O6 A:DG46 3.0 43.0 1.0
O6 A:DG10 3.0 42.0 1.0
N2 A:DG8 3.4 42.0 1.0
K A:K102 3.4 50.2 1.0
C6 A:DG9 3.5 42.5 1.0
C6 A:DG45 3.6 43.0 1.0
C6 A:DG24 3.6 43.1 1.0
N1 A:DG46 3.7 43.1 1.0
C6 A:DG18 3.7 44.0 1.0
C6 A:DG46 3.7 43.4 1.0
C6 A:DG19 3.7 43.4 1.0
N1 A:DG9 3.8 44.4 1.0
N1 A:DG19 3.8 41.8 1.0
C6 A:DG10 3.9 43.0 1.0
C6 A:DG25 3.9 42.3 1.0
N1 A:DG45 4.0 43.3 1.0
N1 A:DG18 4.0 44.4 1.0
N1 A:DG24 4.0 43.8 1.0
N1 A:DG10 4.1 44.2 1.0
C2 A:DG8 4.1 42.1 1.0
N1 A:DG25 4.1 43.6 1.0
N1 A:DG8 4.7 42.6 1.0
C5 A:DG9 4.7 42.7 1.0
C5 A:DG24 4.7 44.0 1.0
C5 A:DG45 4.8 44.3 1.0
N3 A:DG8 4.8 42.6 1.0
C5 A:DG18 4.8 43.2 1.0
C2 A:DG46 4.9 47.3 1.0

Potassium binding site 2 out of 2 in 8fi1

Go back to Potassium Binding Sites List in 8fi1
Potassium binding site 2 out of 2 in the Structure of Lettuce C20G Bound to Dfho


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Structure of Lettuce C20G Bound to Dfho within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K102

b:50.2
occ:1.00
O6 A:DG45 2.6 42.1 1.0
O1 A:747106 2.7 41.6 1.0
O6 A:DG18 2.8 43.8 1.0
N1 A:DA11 2.8 45.8 1.0
O6 A:DG25 2.8 41.9 1.0
O6 A:DG10 2.9 42.0 1.0
O A:HOH213 3.0 46.5 1.0
K A:K101 3.4 45.6 1.0
C6 A:DG45 3.5 43.0 1.0
C6 A:DG25 3.6 42.3 1.0
N6 A:DA11 3.6 42.3 1.0
C1 A:747106 3.6 47.9 1.0
C6 A:DG10 3.6 43.0 1.0
C6 A:DA11 3.7 44.4 1.0
C2 A:DA11 3.7 47.0 1.0
C6 A:DG18 3.7 44.0 1.0
N1 A:DG45 3.8 43.3 1.0
F A:747106 3.8 44.6 1.0
O A:HOH207 3.9 42.8 1.0
N1 A:DG10 3.9 44.2 1.0
N1 A:DG18 3.9 44.4 1.0
N1 A:DG25 4.0 43.6 1.0
C A:747106 4.1 48.1 1.0
C5 A:DG25 4.6 43.5 1.0
C2 A:747106 4.6 48.9 1.0
C5 A:DG45 4.7 44.3 1.0
C5 A:DG10 4.8 44.8 1.0
F1 A:747106 4.9 52.6 1.0
C5 A:DA11 5.0 43.9 1.0
N3 A:DA11 5.0 47.2 1.0

Reference:

L.F.M.Passalacqua, A.R.Ferre-D'amare. Structure of Lettuce C20G Bound to Dfho To Be Published.
Page generated: Mon Aug 12 23:41:56 2024

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