Potassium in PDB 8blc: Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
Enzymatic activity of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
All present enzymatic activity of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp:
5.6.1.7;
Other elements in 8blc:
The structure of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp also contains other interesting chemical elements:
Potassium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
14;
Binding sites:
The binding sites of Potassium atom in the Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
(pdb code 8blc). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 14 binding sites of Potassium where determined in the
Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp, PDB code: 8blc:
Jump to Potassium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Potassium binding site 1 out
of 14 in 8blc
Go back to
Potassium Binding Sites List in 8blc
Potassium binding site 1 out
of 14 in the Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:K603
b:23.6
occ:1.00
|
O1A
|
G:ATP602
|
2.5
|
24.2
|
1.0
|
|
O
|
G:LYS51
|
2.6
|
29.7
|
1.0
|
|
O1G
|
G:ATP602
|
2.7
|
12.6
|
1.0
|
|
OG1
|
G:THR90
|
2.7
|
24.2
|
1.0
|
|
OG1
|
G:THR30
|
3.1
|
17.8
|
1.0
|
|
O
|
G:THR30
|
3.3
|
25.2
|
1.0
|
|
CB
|
G:THR30
|
3.4
|
12.8
|
1.0
|
|
O3A
|
G:ATP602
|
3.4
|
22.5
|
1.0
|
|
C
|
G:THR30
|
3.5
|
17.3
|
1.0
|
|
PA
|
G:ATP602
|
3.5
|
14.5
|
1.0
|
|
CB
|
G:THR90
|
3.6
|
5.7
|
1.0
|
|
O
|
G:HOH771
|
3.6
|
27.1
|
1.0
|
|
N
|
G:LEU31
|
3.8
|
14.7
|
1.0
|
|
CA
|
G:LEU31
|
3.8
|
15.2
|
1.0
|
|
C
|
G:LYS51
|
3.8
|
13.0
|
1.0
|
|
PG
|
G:ATP602
|
3.8
|
20.2
|
1.0
|
|
CG2
|
G:THR90
|
3.9
|
9.8
|
1.0
|
|
NZ
|
G:LYS51
|
4.0
|
13.4
|
1.0
|
|
CA
|
G:THR30
|
4.1
|
14.1
|
1.0
|
|
N
|
G:GLY53
|
4.1
|
17.4
|
1.0
|
|
O3B
|
G:ATP602
|
4.2
|
18.2
|
1.0
|
|
O3G
|
G:ATP602
|
4.2
|
25.7
|
1.0
|
|
O2A
|
G:ATP602
|
4.3
|
25.2
|
1.0
|
|
CB
|
G:LEU31
|
4.4
|
15.9
|
1.0
|
|
CG
|
G:LYS51
|
4.5
|
14.9
|
1.0
|
|
CA
|
G:ASP52
|
4.5
|
22.0
|
1.0
|
|
PB
|
G:ATP602
|
4.5
|
15.3
|
1.0
|
|
N
|
G:ASP52
|
4.6
|
25.5
|
1.0
|
|
C
|
G:ASP52
|
4.6
|
20.5
|
1.0
|
|
CG2
|
G:THR30
|
4.6
|
14.4
|
1.0
|
|
CA
|
G:GLY53
|
4.8
|
13.5
|
1.0
|
|
O5'
|
G:ATP602
|
4.8
|
16.8
|
1.0
|
|
CA
|
G:LYS51
|
4.8
|
11.0
|
1.0
|
|
CB
|
G:LYS51
|
4.9
|
14.6
|
1.0
|
|
CA
|
G:THR90
|
5.0
|
15.1
|
1.0
|
|
Potassium binding site 2 out
of 14 in 8blc
Go back to
Potassium Binding Sites List in 8blc
Potassium binding site 2 out
of 14 in the Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K603
b:25.4
occ:1.00
|
O1A
|
A:ATP602
|
2.5
|
32.6
|
1.0
|
|
O
|
A:LYS51
|
2.6
|
40.0
|
1.0
|
|
OG1
|
A:THR90
|
2.7
|
38.2
|
1.0
|
|
O1G
|
A:ATP602
|
2.7
|
22.5
|
1.0
|
|
O
|
A:THR30
|
2.8
|
41.2
|
1.0
|
|
OG1
|
A:THR30
|
3.1
|
36.4
|
1.0
|
|
CB
|
A:THR30
|
3.4
|
33.7
|
1.0
|
|
O3A
|
A:ATP602
|
3.4
|
32.1
|
1.0
|
|
C
|
A:THR30
|
3.4
|
36.4
|
1.0
|
|
PA
|
A:ATP602
|
3.5
|
17.5
|
1.0
|
|
CB
|
A:THR90
|
3.6
|
26.8
|
1.0
|
|
O
|
A:HOH775
|
3.6
|
23.9
|
1.0
|
|
C
|
A:LYS51
|
3.8
|
29.5
|
1.0
|
|
PG
|
A:ATP602
|
3.8
|
22.4
|
1.0
|
|
NZ
|
A:LYS51
|
3.9
|
30.3
|
1.0
|
|
CG2
|
A:THR90
|
3.9
|
31.5
|
1.0
|
|
CA
|
A:THR30
|
4.1
|
37.1
|
1.0
|
|
N
|
A:LEU31
|
4.1
|
41.7
|
1.0
|
|
N
|
A:GLY53
|
4.1
|
27.4
|
1.0
|
|
O3B
|
A:ATP602
|
4.2
|
28.1
|
1.0
|
|
CA
|
A:LEU31
|
4.2
|
33.3
|
1.0
|
|
O3G
|
A:ATP602
|
4.2
|
27.8
|
1.0
|
|
O2A
|
A:ATP602
|
4.3
|
31.6
|
1.0
|
|
CG
|
A:LYS51
|
4.4
|
33.4
|
1.0
|
|
CA
|
A:ASP52
|
4.5
|
33.3
|
1.0
|
|
PB
|
A:ATP602
|
4.5
|
13.9
|
1.0
|
|
N
|
A:ASP52
|
4.6
|
38.6
|
1.0
|
|
C
|
A:ASP52
|
4.6
|
30.1
|
1.0
|
|
CG2
|
A:THR30
|
4.7
|
33.9
|
1.0
|
|
CA
|
A:GLY53
|
4.7
|
23.9
|
1.0
|
|
O5'
|
A:ATP602
|
4.8
|
25.2
|
1.0
|
|
CA
|
A:LYS51
|
4.8
|
27.3
|
1.0
|
|
CB
|
A:LYS51
|
4.8
|
28.9
|
1.0
|
|
CE
|
A:LYS51
|
4.9
|
31.9
|
1.0
|
|
CA
|
A:THR90
|
4.9
|
32.5
|
1.0
|
|
O
|
A:VAL27
|
5.0
|
50.4
|
1.0
|
|
Potassium binding site 3 out
of 14 in 8blc
Go back to
Potassium Binding Sites List in 8blc
Potassium binding site 3 out
of 14 in the Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 3 of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:K603
b:10.6
occ:1.00
|
O1A
|
B:ATP602
|
2.6
|
18.3
|
1.0
|
|
O1G
|
B:ATP602
|
2.6
|
10.2
|
1.0
|
|
O
|
B:LYS51
|
2.6
|
14.2
|
1.0
|
|
OG1
|
B:THR90
|
2.7
|
7.6
|
1.0
|
|
O
|
B:THR30
|
2.9
|
12.4
|
1.0
|
|
OG1
|
B:THR30
|
3.0
|
1.8
|
1.0
|
|
O3A
|
B:ATP602
|
3.3
|
15.5
|
1.0
|
|
C
|
B:THR30
|
3.4
|
0.7
|
1.0
|
|
CB
|
B:THR30
|
3.4
|
0.1
|
1.0
|
|
PA
|
B:ATP602
|
3.4
|
0.0
|
1.0
|
|
CB
|
B:THR90
|
3.5
|
0.0
|
1.0
|
|
PG
|
B:ATP602
|
3.8
|
0.0
|
1.0
|
|
CG2
|
B:THR90
|
3.8
|
0.0
|
1.0
|
|
C
|
B:LYS51
|
3.8
|
2.2
|
1.0
|
|
NZ
|
B:LYS51
|
3.9
|
4.1
|
1.0
|
|
O3B
|
B:ATP602
|
4.1
|
11.2
|
1.0
|
|
N
|
B:LEU31
|
4.1
|
3.0
|
1.0
|
|
CA
|
B:THR30
|
4.1
|
0.4
|
1.0
|
|
N
|
B:GLY53
|
4.1
|
8.6
|
1.0
|
|
CA
|
B:LEU31
|
4.2
|
0.0
|
1.0
|
|
O2A
|
B:ATP602
|
4.2
|
27.0
|
1.0
|
|
O3G
|
B:ATP602
|
4.2
|
26.8
|
1.0
|
|
PB
|
B:ATP602
|
4.5
|
0.0
|
1.0
|
|
CG
|
B:LYS51
|
4.5
|
0.9
|
1.0
|
|
CA
|
B:ASP52
|
4.6
|
8.0
|
1.0
|
|
C
|
B:ASP52
|
4.6
|
4.7
|
1.0
|
|
N
|
B:ASP52
|
4.6
|
12.1
|
1.0
|
|
CG2
|
B:THR30
|
4.7
|
2.4
|
1.0
|
|
CA
|
B:GLY53
|
4.7
|
0.0
|
1.0
|
|
O5'
|
B:ATP602
|
4.8
|
15.3
|
1.0
|
|
CA
|
B:LYS51
|
4.8
|
0.8
|
1.0
|
|
CA
|
B:THR90
|
4.9
|
0.4
|
1.0
|
|
CE
|
B:LYS51
|
4.9
|
1.7
|
1.0
|
|
CB
|
B:LYS51
|
4.9
|
0.0
|
1.0
|
|
O
|
B:VAL27
|
4.9
|
11.0
|
1.0
|
|
Potassium binding site 4 out
of 14 in 8blc
Go back to
Potassium Binding Sites List in 8blc
Potassium binding site 4 out
of 14 in the Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 4 of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:K603
b:23.7
occ:1.00
|
O
|
C:LYS51
|
2.6
|
34.9
|
1.0
|
|
O1A
|
C:ATP602
|
2.6
|
31.1
|
1.0
|
|
OG1
|
C:THR90
|
2.6
|
32.9
|
1.0
|
|
O1G
|
C:ATP602
|
2.7
|
19.7
|
1.0
|
|
O
|
C:THR30
|
2.9
|
39.4
|
1.0
|
|
OG1
|
C:THR30
|
3.1
|
29.0
|
1.0
|
|
CB
|
C:THR30
|
3.3
|
27.2
|
1.0
|
|
C
|
C:THR30
|
3.4
|
29.9
|
1.0
|
|
CB
|
C:THR90
|
3.5
|
23.9
|
1.0
|
|
PA
|
C:ATP602
|
3.6
|
13.6
|
1.0
|
|
O3A
|
C:ATP602
|
3.6
|
24.2
|
1.0
|
|
C
|
C:LYS51
|
3.8
|
24.2
|
1.0
|
|
CG2
|
C:THR90
|
3.8
|
25.3
|
1.0
|
|
PG
|
C:ATP602
|
3.8
|
9.9
|
1.0
|
|
CA
|
C:THR30
|
4.0
|
30.8
|
1.0
|
|
O3B
|
C:ATP602
|
4.0
|
20.4
|
1.0
|
|
N
|
C:GLY53
|
4.1
|
19.7
|
1.0
|
|
N
|
C:LEU31
|
4.1
|
40.8
|
1.0
|
|
NZ
|
C:LYS51
|
4.1
|
22.9
|
1.0
|
|
CA
|
C:LEU31
|
4.3
|
36.2
|
1.0
|
|
O2A
|
C:ATP602
|
4.3
|
29.0
|
1.0
|
|
CG
|
C:LYS51
|
4.4
|
30.7
|
1.0
|
|
O3G
|
C:ATP602
|
4.5
|
26.6
|
1.0
|
|
CA
|
C:ASP52
|
4.5
|
21.6
|
1.0
|
|
CG2
|
C:THR30
|
4.6
|
29.0
|
1.0
|
|
C
|
C:ASP52
|
4.6
|
19.3
|
1.0
|
|
N
|
C:ASP52
|
4.6
|
28.8
|
1.0
|
|
PB
|
C:ATP602
|
4.6
|
11.8
|
1.0
|
|
CA
|
C:GLY53
|
4.7
|
16.0
|
1.0
|
|
CA
|
C:LYS51
|
4.7
|
24.1
|
1.0
|
|
CB
|
C:LYS51
|
4.8
|
26.4
|
1.0
|
|
O
|
C:VAL27
|
4.9
|
39.8
|
1.0
|
|
CA
|
C:THR90
|
4.9
|
26.3
|
1.0
|
|
O5'
|
C:ATP602
|
4.9
|
21.5
|
1.0
|
|
CE
|
C:LYS51
|
5.0
|
27.6
|
1.0
|
|
Potassium binding site 5 out
of 14 in 8blc
Go back to
Potassium Binding Sites List in 8blc
Potassium binding site 5 out
of 14 in the Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 5 of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:K603
b:22.8
occ:1.00
|
O
|
D:LYS51
|
2.6
|
30.0
|
1.0
|
|
O1A
|
D:ATP602
|
2.6
|
24.7
|
1.0
|
|
O1G
|
D:ATP602
|
2.6
|
11.4
|
1.0
|
|
OG1
|
D:THR90
|
2.7
|
23.6
|
1.0
|
|
O
|
D:THR30
|
2.8
|
26.3
|
1.0
|
|
OG1
|
D:THR30
|
3.0
|
17.5
|
1.0
|
|
CB
|
D:THR30
|
3.3
|
16.0
|
1.0
|
|
C
|
D:THR30
|
3.4
|
17.8
|
1.0
|
|
O3A
|
D:ATP602
|
3.5
|
22.1
|
1.0
|
|
PA
|
D:ATP602
|
3.6
|
15.3
|
1.0
|
|
CB
|
D:THR90
|
3.6
|
3.6
|
1.0
|
|
O
|
D:HOH752
|
3.7
|
20.9
|
1.0
|
|
C
|
D:LYS51
|
3.7
|
13.7
|
1.0
|
|
PG
|
D:ATP602
|
3.9
|
16.2
|
1.0
|
|
CG2
|
D:THR90
|
3.9
|
9.5
|
1.0
|
|
NZ
|
D:LYS51
|
4.0
|
14.9
|
1.0
|
|
CA
|
D:THR30
|
4.0
|
16.4
|
1.0
|
|
N
|
D:GLY53
|
4.1
|
19.1
|
1.0
|
|
N
|
D:LEU31
|
4.1
|
20.6
|
1.0
|
|
CA
|
D:LEU31
|
4.2
|
8.9
|
1.0
|
|
O3B
|
D:ATP602
|
4.2
|
15.6
|
1.0
|
|
CG
|
D:LYS51
|
4.3
|
19.3
|
1.0
|
|
O2A
|
D:ATP602
|
4.4
|
23.2
|
1.0
|
|
O3G
|
D:ATP602
|
4.4
|
22.9
|
1.0
|
|
CA
|
D:ASP52
|
4.5
|
21.0
|
1.0
|
|
N
|
D:ASP52
|
4.5
|
26.6
|
1.0
|
|
C
|
D:ASP52
|
4.5
|
22.3
|
1.0
|
|
CG2
|
D:THR30
|
4.6
|
18.3
|
1.0
|
|
PB
|
D:ATP602
|
4.6
|
9.1
|
1.0
|
|
CA
|
D:LYS51
|
4.7
|
9.8
|
1.0
|
|
CA
|
D:GLY53
|
4.7
|
16.4
|
1.0
|
|
CB
|
D:LYS51
|
4.8
|
14.4
|
1.0
|
|
O
|
D:VAL27
|
4.9
|
26.3
|
1.0
|
|
O5'
|
D:ATP602
|
4.9
|
20.0
|
1.0
|
|
CE
|
D:LYS51
|
4.9
|
20.6
|
1.0
|
|
CA
|
D:THR90
|
5.0
|
16.0
|
1.0
|
|
Potassium binding site 6 out
of 14 in 8blc
Go back to
Potassium Binding Sites List in 8blc
Potassium binding site 6 out
of 14 in the Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 6 of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:K603
b:16.3
occ:1.00
|
O1A
|
E:ATP602
|
2.6
|
28.3
|
1.0
|
|
O1G
|
E:ATP602
|
2.6
|
13.9
|
1.0
|
|
O
|
E:LYS51
|
2.6
|
30.3
|
1.0
|
|
OG1
|
E:THR90
|
2.7
|
22.1
|
1.0
|
|
O
|
E:THR30
|
2.8
|
24.2
|
1.0
|
|
OG1
|
E:THR30
|
3.1
|
15.1
|
1.0
|
|
O3A
|
E:ATP602
|
3.4
|
21.2
|
1.0
|
|
C
|
E:THR30
|
3.4
|
16.0
|
1.0
|
|
CB
|
E:THR30
|
3.4
|
13.9
|
1.0
|
|
PA
|
E:ATP602
|
3.4
|
14.0
|
1.0
|
|
CB
|
E:THR90
|
3.5
|
2.6
|
1.0
|
|
O
|
E:HOH768
|
3.7
|
34.7
|
1.0
|
|
PG
|
E:ATP602
|
3.8
|
17.2
|
1.0
|
|
C
|
E:LYS51
|
3.8
|
14.9
|
1.0
|
|
CG2
|
E:THR90
|
3.8
|
5.7
|
1.0
|
|
NZ
|
E:LYS51
|
4.0
|
16.5
|
1.0
|
|
N
|
E:LEU31
|
4.1
|
18.1
|
1.0
|
|
CA
|
E:THR30
|
4.1
|
15.1
|
1.0
|
|
N
|
E:GLY53
|
4.1
|
15.2
|
1.0
|
|
CA
|
E:LEU31
|
4.1
|
8.0
|
1.0
|
|
O3B
|
E:ATP602
|
4.2
|
22.8
|
1.0
|
|
O2A
|
E:ATP602
|
4.3
|
31.2
|
1.0
|
|
CG
|
E:LYS51
|
4.4
|
20.2
|
1.0
|
|
O3G
|
E:ATP602
|
4.4
|
26.0
|
1.0
|
|
PB
|
E:ATP602
|
4.5
|
11.7
|
1.0
|
|
CA
|
E:ASP52
|
4.6
|
19.1
|
1.0
|
|
C
|
E:ASP52
|
4.6
|
17.8
|
1.0
|
|
N
|
E:ASP52
|
4.6
|
23.9
|
1.0
|
|
CG2
|
E:THR30
|
4.7
|
14.0
|
1.0
|
|
O5'
|
E:ATP602
|
4.8
|
21.2
|
1.0
|
|
CA
|
E:GLY53
|
4.8
|
12.6
|
1.0
|
|
CA
|
E:LYS51
|
4.8
|
12.7
|
1.0
|
|
CB
|
E:LYS51
|
4.9
|
19.3
|
1.0
|
|
CE
|
E:LYS51
|
4.9
|
21.1
|
1.0
|
|
CA
|
E:THR90
|
4.9
|
11.4
|
1.0
|
|
O
|
E:VAL27
|
4.9
|
25.9
|
1.0
|
|
Potassium binding site 7 out
of 14 in 8blc
Go back to
Potassium Binding Sites List in 8blc
Potassium binding site 7 out
of 14 in the Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 7 of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:K603
b:23.1
occ:1.00
|
O
|
F:LYS51
|
2.6
|
33.0
|
1.0
|
|
O1A
|
F:ATP602
|
2.6
|
28.1
|
1.0
|
|
OG1
|
F:THR90
|
2.6
|
37.5
|
1.0
|
|
O1G
|
F:ATP602
|
2.7
|
19.5
|
1.0
|
|
OG1
|
F:THR30
|
2.9
|
33.2
|
1.0
|
|
O
|
F:THR30
|
2.9
|
35.2
|
1.0
|
|
CB
|
F:THR30
|
3.3
|
30.5
|
1.0
|
|
C
|
F:THR30
|
3.4
|
31.3
|
1.0
|
|
CB
|
F:THR90
|
3.5
|
27.6
|
1.0
|
|
O3A
|
F:ATP602
|
3.5
|
25.5
|
1.0
|
|
PA
|
F:ATP602
|
3.6
|
16.6
|
1.0
|
|
O
|
F:HOH750
|
3.7
|
24.8
|
1.0
|
|
C
|
F:LYS51
|
3.7
|
24.3
|
1.0
|
|
CG2
|
F:THR90
|
3.8
|
27.5
|
1.0
|
|
PG
|
F:ATP602
|
3.9
|
20.2
|
1.0
|
|
CA
|
F:THR30
|
4.0
|
32.0
|
1.0
|
|
N
|
F:GLY53
|
4.0
|
23.7
|
1.0
|
|
NZ
|
F:LYS51
|
4.0
|
29.0
|
1.0
|
|
N
|
F:LEU31
|
4.1
|
30.7
|
1.0
|
|
CA
|
F:LEU31
|
4.2
|
25.3
|
1.0
|
|
O3B
|
F:ATP602
|
4.3
|
25.7
|
1.0
|
|
O2A
|
F:ATP602
|
4.3
|
29.1
|
1.0
|
|
CG
|
F:LYS51
|
4.3
|
31.9
|
1.0
|
|
O3G
|
F:ATP602
|
4.4
|
27.2
|
1.0
|
|
CA
|
F:ASP52
|
4.4
|
28.5
|
1.0
|
|
N
|
F:ASP52
|
4.5
|
35.1
|
1.0
|
|
C
|
F:ASP52
|
4.5
|
24.8
|
1.0
|
|
CG2
|
F:THR30
|
4.6
|
32.1
|
1.0
|
|
CA
|
F:GLY53
|
4.7
|
21.9
|
1.0
|
|
CA
|
F:LYS51
|
4.7
|
24.3
|
1.0
|
|
PB
|
F:ATP602
|
4.7
|
9.9
|
1.0
|
|
CB
|
F:LYS51
|
4.8
|
29.7
|
1.0
|
|
O
|
F:VAL27
|
4.9
|
39.1
|
1.0
|
|
O5'
|
F:ATP602
|
4.9
|
23.7
|
1.0
|
|
CA
|
F:THR90
|
4.9
|
32.9
|
1.0
|
|
CE
|
F:LYS51
|
4.9
|
27.7
|
1.0
|
|
Potassium binding site 8 out
of 14 in 8blc
Go back to
Potassium Binding Sites List in 8blc
Potassium binding site 8 out
of 14 in the Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 8 of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:K603
b:14.9
occ:1.00
|
O
|
H:LYS51
|
2.6
|
20.5
|
1.0
|
|
O1A
|
H:ATP602
|
2.6
|
18.2
|
1.0
|
|
O1G
|
H:ATP602
|
2.7
|
9.1
|
1.0
|
|
OG1
|
H:THR90
|
2.8
|
14.4
|
1.0
|
|
O
|
H:THR30
|
2.9
|
17.6
|
1.0
|
|
OG1
|
H:THR30
|
3.1
|
9.1
|
1.0
|
|
O3A
|
H:ATP602
|
3.3
|
14.4
|
1.0
|
|
CB
|
H:THR30
|
3.4
|
6.0
|
1.0
|
|
C
|
H:THR30
|
3.4
|
7.6
|
1.0
|
|
PA
|
H:ATP602
|
3.5
|
9.3
|
1.0
|
|
O
|
H:HOH770
|
3.5
|
21.0
|
1.0
|
|
CB
|
H:THR90
|
3.6
|
0.0
|
1.0
|
|
C
|
H:LYS51
|
3.8
|
10.4
|
1.0
|
|
NZ
|
H:LYS51
|
3.8
|
9.4
|
1.0
|
|
PG
|
H:ATP602
|
3.8
|
13.4
|
1.0
|
|
CG2
|
H:THR90
|
3.9
|
0.0
|
1.0
|
|
CA
|
H:THR30
|
4.1
|
5.6
|
1.0
|
|
N
|
H:LEU31
|
4.1
|
8.2
|
1.0
|
|
O3B
|
H:ATP602
|
4.2
|
13.5
|
1.0
|
|
CA
|
H:LEU31
|
4.2
|
2.3
|
1.0
|
|
N
|
H:GLY53
|
4.2
|
14.2
|
1.0
|
|
O2A
|
H:ATP602
|
4.3
|
21.4
|
1.0
|
|
CG
|
H:LYS51
|
4.4
|
9.9
|
1.0
|
|
O3G
|
H:ATP602
|
4.4
|
19.6
|
1.0
|
|
PB
|
H:ATP602
|
4.5
|
6.1
|
1.0
|
|
CA
|
H:ASP52
|
4.6
|
15.4
|
1.0
|
|
N
|
H:ASP52
|
4.6
|
20.7
|
1.0
|
|
C
|
H:ASP52
|
4.7
|
14.4
|
1.0
|
|
CG2
|
H:THR30
|
4.7
|
4.7
|
1.0
|
|
CA
|
H:LYS51
|
4.8
|
7.7
|
1.0
|
|
O5'
|
H:ATP602
|
4.8
|
14.8
|
1.0
|
|
CB
|
H:LYS51
|
4.8
|
10.9
|
1.0
|
|
CE
|
H:LYS51
|
4.8
|
12.8
|
1.0
|
|
CA
|
H:GLY53
|
4.9
|
7.7
|
1.0
|
|
CA
|
H:THR90
|
5.0
|
4.4
|
1.0
|
|
Potassium binding site 9 out
of 14 in 8blc
Go back to
Potassium Binding Sites List in 8blc
Potassium binding site 9 out
of 14 in the Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 9 of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:K603
b:21.2
occ:1.00
|
O1A
|
I:ATP602
|
2.6
|
26.2
|
1.0
|
|
O
|
I:LYS51
|
2.6
|
31.8
|
1.0
|
|
O1G
|
I:ATP602
|
2.7
|
15.8
|
1.0
|
|
OG1
|
I:THR90
|
2.7
|
32.6
|
1.0
|
|
O
|
I:THR30
|
2.8
|
35.3
|
1.0
|
|
OG1
|
I:THR30
|
3.1
|
33.5
|
1.0
|
|
O3A
|
I:ATP602
|
3.3
|
23.0
|
1.0
|
|
C
|
I:THR30
|
3.4
|
29.1
|
1.0
|
|
CB
|
I:THR30
|
3.4
|
31.5
|
1.0
|
|
PA
|
I:ATP602
|
3.5
|
14.8
|
1.0
|
|
O
|
I:HOH764
|
3.5
|
22.8
|
1.0
|
|
CB
|
I:THR90
|
3.6
|
24.2
|
1.0
|
|
C
|
I:LYS51
|
3.8
|
22.7
|
1.0
|
|
NZ
|
I:LYS51
|
3.8
|
25.2
|
1.0
|
|
PG
|
I:ATP602
|
3.8
|
13.9
|
1.0
|
|
CG2
|
I:THR90
|
3.9
|
26.3
|
1.0
|
|
CA
|
I:THR30
|
4.0
|
30.7
|
1.0
|
|
N
|
I:LEU31
|
4.1
|
34.2
|
1.0
|
|
O3B
|
I:ATP602
|
4.2
|
23.4
|
1.0
|
|
N
|
I:GLY53
|
4.2
|
22.7
|
1.0
|
|
CA
|
I:LEU31
|
4.2
|
24.4
|
1.0
|
|
O2A
|
I:ATP602
|
4.3
|
25.2
|
1.0
|
|
O3G
|
I:ATP602
|
4.3
|
26.0
|
1.0
|
|
CG
|
I:LYS51
|
4.4
|
27.1
|
1.0
|
|
PB
|
I:ATP602
|
4.5
|
6.4
|
1.0
|
|
CA
|
I:ASP52
|
4.6
|
24.0
|
1.0
|
|
N
|
I:ASP52
|
4.6
|
29.8
|
1.0
|
|
C
|
I:ASP52
|
4.7
|
24.1
|
1.0
|
|
CG2
|
I:THR30
|
4.7
|
31.4
|
1.0
|
|
O5'
|
I:ATP602
|
4.8
|
22.2
|
1.0
|
|
CA
|
I:LYS51
|
4.8
|
21.3
|
1.0
|
|
CE
|
I:LYS51
|
4.8
|
25.8
|
1.0
|
|
CB
|
I:LYS51
|
4.8
|
26.1
|
1.0
|
|
CA
|
I:GLY53
|
4.8
|
17.0
|
1.0
|
|
CA
|
I:THR90
|
5.0
|
29.9
|
1.0
|
|
Potassium binding site 10 out
of 14 in 8blc
Go back to
Potassium Binding Sites List in 8blc
Potassium binding site 10 out
of 14 in the Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp
 Mono view
 Stereo pair view
|
|
A full contact list of Potassium with other atoms in the K binding
site number 10 of Structure of the Groel-Atp Complex Plunge-Frozen 50 Ms After Mixing with Atp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:K603
b:12.2
occ:1.00
|
O
|
J:LYS51
|
2.5
|
18.6
|
1.0
|
|
O1A
|
J:ATP602
|
2.6
|
26.4
|
1.0
|
|
OG1
|
J:THR90
|
2.6
|
14.4
|
1.0
|
|
O1G
|
J:ATP602
|
2.7
|
17.0
|
1.0
|
|
OG1
|
J:THR30
|
2.9
|
2.8
|
1.0
|
|
O
|
J:THR30
|
2.9
|
15.4
|
1.0
|
|
CB
|
J:THR30
|
3.3
|
1.5
|
1.0
|
|
C
|
J:THR30
|
3.4
|
7.3
|
1.0
|
|
CB
|
J:THR90
|
3.5
|
3.1
|
1.0
|
|
O3A
|
J:ATP602
|
3.5
|
21.7
|
1.0
|
|
PA
|
J:ATP602
|
3.6
|
3.7
|
1.0
|
|
O
|
J:HOH762
|
3.6
|
19.2
|
1.0
|
|
C
|
J:LYS51
|
3.7
|
3.1
|
1.0
|
|
CG2
|
J:THR90
|
3.8
|
0.0
|
1.0
|
|
PG
|
J:ATP602
|
3.9
|
0.0
|
1.0
|
|
CA
|
J:THR30
|
4.0
|
3.4
|
1.0
|
|
NZ
|
J:LYS51
|
4.0
|
8.6
|
1.0
|
|
N
|
J:GLY53
|
4.0
|
5.8
|
1.0
|
|
N
|
J:LEU31
|
4.1
|
3.2
|
1.0
|
|
CA
|
J:LEU31
|
4.2
|
0.0
|
1.0
|
|
O3B
|
J:ATP602
|
4.3
|
18.1
|
1.0
|
|
CG
|
J:LYS51
|
4.3
|
10.2
|
1.0
|
|
O2A
|
J:ATP602
|
4.3
|
32.7
|
1.0
|
|
O3G
|
J:ATP602
|
4.4
|
26.6
|
1.0
|
|
CA
|
J:ASP52
|
4.4
|
12.3
|
1.0
|
|
C
|
J:ASP52
|
4.5
|
4.4
|
1.0
|
|
N
|
J:ASP52
|
4.5
|
16.5
|
1.0
|
|
CG2
|
J:THR30
|
4.6
|
4.8
|
1.0
|
|
CA
|
J:GLY53
|
4.7
|
3.4
|
1.0
|
|
PB
|
J:ATP602
|
4.7
|
0.0
|
1.0
|
|
CA
|
J:LYS51
|
4.7
|
1.6
|
1.0
|
|
CB
|
J:LYS51
|
4.8
|
7.2
|
1.0
|
|
O
|
J:VAL27
|
4.9
|
10.3
|
1.0
|
|
O5'
|
J:ATP602
|
4.9
|
19.3
|
1.0
|
|
CA
|
J:THR90
|
4.9
|
4.5
|
1.0
|
|
CE
|
J:LYS51
|
4.9
|
7.1
|
1.0
|
|
Reference:
S.Torino,
M.Dhurandhar,
A.Stroobants,
R.Claessens,
R.Efremov.
Time-Resolved Cryo-Em Using A Combination of Droplet Microfluidics with on-Demand Jetting Nat.Methods 2023.
ISSN: ESSN 1548-7105
DOI: 10.1038/S41592-023-01967-Z
Page generated: Mon Aug 12 22:04:39 2024
|
