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Potassium in PDB 7zrl: Cryo-Em Map of the Unphosphorylated Kdpfabc Complex in the E2-P Conformation, Under Turnover Conditions

Enzymatic activity of Cryo-Em Map of the Unphosphorylated Kdpfabc Complex in the E2-P Conformation, Under Turnover Conditions

All present enzymatic activity of Cryo-Em Map of the Unphosphorylated Kdpfabc Complex in the E2-P Conformation, Under Turnover Conditions:
7.2.2.6;

Potassium Binding Sites:

The binding sites of Potassium atom in the Cryo-Em Map of the Unphosphorylated Kdpfabc Complex in the E2-P Conformation, Under Turnover Conditions (pdb code 7zrl). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Cryo-Em Map of the Unphosphorylated Kdpfabc Complex in the E2-P Conformation, Under Turnover Conditions, PDB code: 7zrl:

Potassium binding site 1 out of 1 in 7zrl

Go back to Potassium Binding Sites List in 7zrl
Potassium binding site 1 out of 1 in the Cryo-Em Map of the Unphosphorylated Kdpfabc Complex in the E2-P Conformation, Under Turnover Conditions


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Cryo-Em Map of the Unphosphorylated Kdpfabc Complex in the E2-P Conformation, Under Turnover Conditions within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K601

b:57.0
occ:1.00
OG A:SER378 2.9 26.2 1.0
ND2 A:ASN466 3.1 25.3 1.0
OH A:TYR381 4.0 27.0 1.0
CB A:SER378 4.1 26.2 1.0
CG A:ASN466 4.2 25.3 1.0
CG1 A:VAL496 4.3 24.4 1.0
CG2 A:VAL496 4.4 24.4 1.0
CE1 A:TYR381 4.5 27.0 1.0
O A:ASN465 4.5 25.5 1.0
CB A:VAL496 4.5 24.4 1.0
CB A:ASN466 4.6 25.3 1.0
CZ A:TYR381 4.7 27.0 1.0
NH1 A:ARG493 4.8 24.9 1.0
C A:ASN465 5.0 25.5 1.0

Reference:

J.M.Silberberg, C.Stock, L.Hielkema, R.A.Corey, J.Rheinberger, D.Wunnicke, V.R.A.Dubach, P.J.Stansfeld, I.Hanelt, C.Paulino. Inhibited Kdpfabc Transitions Into An E1 Off-Cycle State. Elife V. 11 2022.
ISSN: ESSN 2050-084X
PubMed: 36255052
DOI: 10.7554/ELIFE.80988
Page generated: Mon Aug 12 21:56:09 2024

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