Potassium in PDB 7zgo: Cryo-Em Structure of Human NKCC1 (Tm Domain)

Other elements in 7zgo:

The structure of Cryo-Em Structure of Human NKCC1 (Tm Domain) also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms
Sodium (Na) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Cryo-Em Structure of Human NKCC1 (Tm Domain) (pdb code 7zgo). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Cryo-Em Structure of Human NKCC1 (Tm Domain), PDB code: 7zgo:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 7zgo

Go back to Potassium Binding Sites List in 7zgo
Potassium binding site 1 out of 2 in the Cryo-Em Structure of Human NKCC1 (Tm Domain)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Cryo-Em Structure of Human NKCC1 (Tm Domain) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1302

b:41.9
occ:1.00
OH A:TYR383 2.7 45.0 1.0
O A:ILE299 2.7 42.7 1.0
O A:PRO496 2.7 42.6 1.0
O A:THR499 2.8 41.9 1.0
O A:ASN298 2.9 46.6 1.0
O A:ALA497 3.1 42.8 1.0
C A:ILE299 3.3 42.7 1.0
CA A:ILE299 3.4 42.7 1.0
OG1 A:THR499 3.6 41.9 1.0
C A:THR499 3.6 41.9 1.0
CL A:CL1303 3.7 49.9 1.0
C A:ALA497 3.7 42.8 1.0
C A:ASN298 3.8 46.6 1.0
C A:PRO496 3.9 42.6 1.0
O A:HOH1405 3.9 46.3 1.0
CZ A:TYR383 3.9 45.0 1.0
CA A:ALA497 3.9 42.8 1.0
N A:ILE299 4.1 42.7 1.0
N A:THR499 4.1 41.9 1.0
CA A:THR499 4.3 41.9 1.0
CE1 A:TYR383 4.4 45.0 1.0
N A:ALA497 4.4 42.8 1.0
ND2 A:ASN298 4.5 46.6 1.0
N A:GLY500 4.5 45.6 1.0
N A:TRP300 4.5 43.4 1.0
N A:GLY301 4.6 45.2 1.0
CB A:ILE299 4.6 42.7 1.0
CB A:THR499 4.6 41.9 1.0
OG A:SER614 4.6 46.4 1.0
N A:ALA498 4.7 41.3 1.0
O A:HOH1404 4.7 44.5 1.0
C A:ALA498 4.8 41.3 1.0
CG2 A:ILE299 4.8 42.7 1.0
CA A:GLY500 4.8 45.6 1.0
CA A:GLY301 4.9 45.2 1.0

Potassium binding site 2 out of 2 in 7zgo

Go back to Potassium Binding Sites List in 7zgo
Potassium binding site 2 out of 2 in the Cryo-Em Structure of Human NKCC1 (Tm Domain)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Cryo-Em Structure of Human NKCC1 (Tm Domain) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K1302

b:43.5
occ:1.00
OH B:TYR383 2.7 45.7 1.0
O B:ILE299 2.7 43.9 1.0
O B:PRO496 2.8 43.4 1.0
O B:THR499 2.8 43.3 1.0
O B:ASN298 2.9 47.8 1.0
O B:ALA497 3.1 43.9 1.0
C B:ILE299 3.3 43.9 1.0
CA B:ILE299 3.4 43.9 1.0
OG1 B:THR499 3.6 43.3 1.0
C B:THR499 3.6 43.3 1.0
CL B:CL1304 3.7 50.9 1.0
C B:ALA497 3.7 43.9 1.0
C B:ASN298 3.8 47.8 1.0
O B:HOH1405 3.9 47.0 1.0
C B:PRO496 3.9 43.4 1.0
CZ B:TYR383 3.9 45.7 1.0
CA B:ALA497 4.0 43.9 1.0
N B:THR499 4.1 43.3 1.0
N B:ILE299 4.1 43.9 1.0
CA B:THR499 4.3 43.3 1.0
CE1 B:TYR383 4.4 45.7 1.0
N B:ALA497 4.4 43.9 1.0
ND2 B:ASN298 4.5 47.8 1.0
N B:GLY500 4.5 47.1 1.0
N B:TRP300 4.5 43.2 1.0
CB B:THR499 4.6 43.3 1.0
CB B:ILE299 4.6 43.9 1.0
N B:ALA498 4.6 42.5 1.0
OG B:SER614 4.7 47.2 1.0
N B:GLY301 4.7 46.6 1.0
C B:ALA498 4.7 42.5 1.0
CA B:GLY500 4.8 47.1 1.0
CG2 B:ILE299 4.8 43.9 1.0
O B:HOH1404 5.0 45.5 1.0

Reference:

P.Nissen, R.Fenton, C.Neumann, L.Lindtoft Rosenbaek, R.Kock Flygaard, M.Habeck, J.Lykkegaard Karlsen, Y.Wang, K.Lindorff-Larsen, H.Gad, R.Hartmann, J.Lyons. Cryo-Em Structure of Human NKCC1 (Tm Domain) To Be Published.
Page generated: Wed Apr 5 10:30:29 2023

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