Atomistry » Potassium » PDB 7wf3-7yzb » 7wm1
Atomistry »
  Potassium »
    PDB 7wf3-7yzb »
      7wm1 »

Potassium in PDB 7wm1: Cryo-Em Structure of AKT1-ATKC1

Potassium Binding Sites:

The binding sites of Potassium atom in the Cryo-Em Structure of AKT1-ATKC1 (pdb code 7wm1). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 3 binding sites of Potassium where determined in the Cryo-Em Structure of AKT1-ATKC1, PDB code: 7wm1:
Jump to Potassium binding site number: 1; 2; 3;

Potassium binding site 1 out of 3 in 7wm1

Go back to Potassium Binding Sites List in 7wm1
Potassium binding site 1 out of 3 in the Cryo-Em Structure of AKT1-ATKC1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Cryo-Em Structure of AKT1-ATKC1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K902

b:30.0
occ:1.00
O C:VAL254 2.6 4.6 1.0
O B:VAL290 2.6 0.9 1.0
O D:VAL290 2.6 0.4 1.0
O A:VAL254 2.6 3.4 1.0
O B:THR289 3.0 1.6 1.0
O D:THR289 3.0 3.9 1.0
O A:THR253 3.1 4.4 1.0
O C:THR253 3.2 5.0 1.0
K A:K903 3.3 30.0 1.0
C C:VAL254 3.5 4.6 1.0
C A:VAL254 3.6 3.4 1.0
C B:VAL290 3.6 0.9 1.0
C D:VAL290 3.6 0.4 1.0
CA C:VAL254 4.0 4.6 1.0
CA A:VAL254 4.0 3.4 1.0
CA B:VAL290 4.1 0.9 1.0
CA D:VAL290 4.1 0.4 1.0
C C:THR253 4.1 5.0 1.0
C B:THR289 4.1 1.6 1.0
C A:THR253 4.1 4.4 1.0
C D:THR289 4.1 3.9 1.0
K A:K904 4.3 30.0 1.0
O C:GLY255 4.5 32.6 1.0
N C:GLY255 4.6 32.6 1.0
N C:VAL254 4.6 4.6 1.0
O A:GLY255 4.6 32.6 1.0
N A:VAL254 4.6 3.4 1.0
N A:GLY255 4.6 32.6 1.0
N B:VAL290 4.6 0.9 1.0
N D:VAL290 4.6 0.4 1.0
N B:GLY291 4.6 0.6 1.0
N D:GLY291 4.6 0.1 1.0
O B:GLY291 4.7 0.6 1.0
O D:GLY291 4.7 0.1 1.0
CA C:GLY255 4.9 32.6 1.0
CA B:GLY291 4.9 0.6 1.0
CA A:GLY255 4.9 32.6 1.0
CA D:GLY291 5.0 0.1 1.0

Potassium binding site 2 out of 3 in 7wm1

Go back to Potassium Binding Sites List in 7wm1
Potassium binding site 2 out of 3 in the Cryo-Em Structure of AKT1-ATKC1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Cryo-Em Structure of AKT1-ATKC1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K903

b:30.0
occ:1.00
O A:THR253 2.7 4.4 1.0
O C:THR253 2.7 5.0 1.0
O D:THR289 2.8 3.9 1.0
O B:THR289 2.8 1.6 1.0
OG1 A:THR253 2.9 4.4 1.0
OG1 C:THR253 3.0 5.0 1.0
K A:K902 3.3 30.0 1.0
CB A:THR253 3.7 4.4 1.0
OG1 D:THR289 3.7 3.9 1.0
OG1 B:THR289 3.7 1.6 1.0
CB B:THR289 3.7 1.6 1.0
CB D:THR289 3.7 3.9 1.0
C A:THR253 3.7 4.4 1.0
C C:THR253 3.7 5.0 1.0
CB C:THR253 3.8 5.0 1.0
C D:THR289 3.8 3.9 1.0
C B:THR289 3.8 1.6 1.0
CA A:THR253 4.3 4.4 1.0
CA C:THR253 4.4 5.0 1.0
CA B:THR289 4.4 1.6 1.0
CA D:THR289 4.4 3.9 1.0
N C:VAL254 4.7 4.6 1.0
N A:VAL254 4.7 3.4 1.0
N D:VAL290 4.8 0.4 1.0
N B:VAL290 4.8 0.9 1.0
CG2 B:THR289 4.8 1.6 1.0
CA C:VAL254 4.8 4.6 1.0
CG2 D:THR289 4.8 3.9 1.0
CA A:VAL254 4.9 3.4 1.0
CG2 A:THR253 4.9 4.4 1.0
CA D:VAL290 5.0 0.4 1.0

Potassium binding site 3 out of 3 in 7wm1

Go back to Potassium Binding Sites List in 7wm1
Potassium binding site 3 out of 3 in the Cryo-Em Structure of AKT1-ATKC1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Cryo-Em Structure of AKT1-ATKC1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K904

b:30.0
occ:1.00
O C:GLY255 2.4 32.6 1.0
O A:GLY255 2.4 32.6 1.0
O B:GLY291 2.4 0.6 1.0
O D:GLY291 2.4 0.1 1.0
O C:TYR256 3.3 3.4 1.0
O A:TYR256 3.3 3.2 1.0
C C:GLY255 3.6 32.6 1.0
C A:GLY255 3.6 32.6 1.0
C B:GLY291 3.6 0.6 1.0
C D:GLY291 3.6 0.1 1.0
O A:VAL254 3.9 3.4 1.0
O B:VAL290 3.9 0.9 1.0
C C:TYR256 3.9 3.4 1.0
O D:VAL290 3.9 0.4 1.0
O B:TYR292 3.9 1.0 1.0
O C:VAL254 3.9 4.6 1.0
O D:TYR292 3.9 1.8 1.0
C A:TYR256 3.9 3.2 1.0
C B:TYR292 4.1 1.0 1.0
CA C:TYR256 4.1 3.4 1.0
C D:TYR292 4.1 1.8 1.0
CA A:TYR256 4.2 3.2 1.0
CA B:TYR292 4.2 1.0 1.0
CA D:TYR292 4.3 1.8 1.0
K A:K902 4.3 30.0 1.0
N C:TYR256 4.3 3.4 1.0
N A:TYR256 4.3 3.2 1.0
N B:TYR292 4.4 1.0 1.0
N D:TYR292 4.4 1.8 1.0
CA B:GLY291 4.6 0.6 1.0
CA D:GLY291 4.6 0.1 1.0
CA A:GLY255 4.6 32.6 1.0
CA C:GLY255 4.6 32.6 1.0
N C:GLY257 4.9 4.3 1.0
N B:GLY293 4.9 1.9 1.0
N A:GLY257 4.9 5.2 1.0
N D:GLY293 4.9 32.6 1.0
C B:VAL290 4.9 0.9 1.0
C A:VAL254 4.9 3.4 1.0
C D:VAL290 4.9 0.4 1.0
C C:VAL254 5.0 4.6 1.0

Reference:

L.Dongliang, Z.Zijie, Q.Yannan, T.Yuyue, S.Huaizong. Structural Basis For the Regulation Mechanism of A Hyper Polarization-Activated K+ Channel AKT1 By ATKC1 To Be Published.
Page generated: Mon Aug 12 21:30:31 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy