Potassium in PDB 7wf3: Composite Map of Human KV1.3 Channel in Apo State with Beta Subunits
Potassium Binding Sites:
The binding sites of Potassium atom in the Composite Map of Human KV1.3 Channel in Apo State with Beta Subunits
(pdb code 7wf3). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the
Composite Map of Human KV1.3 Channel in Apo State with Beta Subunits, PDB code: 7wf3:
Jump to Potassium binding site number:
1;
2;
3;
4;
Potassium binding site 1 out
of 4 in 7wf3
Go back to
Potassium Binding Sites List in 7wf3
Potassium binding site 1 out
of 4 in the Composite Map of Human KV1.3 Channel in Apo State with Beta Subunits
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of Composite Map of Human KV1.3 Channel in Apo State with Beta Subunits within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:K501
b:20.0
occ:1.00
|
CA
|
B:GLY448
|
4.4
|
150.7
|
1.0
|
CA
|
F:GLY448
|
4.4
|
150.7
|
1.0
|
CA
|
H:GLY448
|
4.4
|
150.7
|
1.0
|
CA
|
D:GLY448
|
4.5
|
150.7
|
1.0
|
O
|
H:GLY446
|
4.5
|
139.8
|
1.0
|
O
|
B:GLY446
|
4.5
|
139.8
|
1.0
|
O
|
D:GLY446
|
4.5
|
139.8
|
1.0
|
O
|
F:GLY446
|
4.6
|
139.8
|
1.0
|
N
|
B:GLY448
|
4.6
|
150.7
|
1.0
|
N
|
F:GLY448
|
4.6
|
150.7
|
1.0
|
N
|
H:GLY448
|
4.6
|
150.7
|
1.0
|
N
|
D:GLY448
|
4.7
|
150.7
|
1.0
|
O
|
D:VAL445
|
4.7
|
133.7
|
1.0
|
C
|
B:GLY446
|
4.8
|
139.8
|
1.0
|
O
|
H:VAL445
|
4.8
|
133.7
|
1.0
|
C
|
H:GLY446
|
4.8
|
139.8
|
1.0
|
O
|
B:VAL445
|
4.8
|
133.7
|
1.0
|
C
|
D:GLY446
|
4.8
|
139.8
|
1.0
|
C
|
F:GLY446
|
4.8
|
139.8
|
1.0
|
O
|
F:VAL445
|
4.9
|
133.7
|
1.0
|
CA
|
B:GLY446
|
4.9
|
139.8
|
1.0
|
CA
|
H:GLY446
|
4.9
|
139.8
|
1.0
|
CA
|
D:GLY446
|
4.9
|
139.8
|
1.0
|
CA
|
F:GLY446
|
5.0
|
139.8
|
1.0
|
|
Potassium binding site 2 out
of 4 in 7wf3
Go back to
Potassium Binding Sites List in 7wf3
Potassium binding site 2 out
of 4 in the Composite Map of Human KV1.3 Channel in Apo State with Beta Subunits
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of Composite Map of Human KV1.3 Channel in Apo State with Beta Subunits within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:K502
b:20.0
occ:1.00
|
O
|
H:VAL445
|
2.9
|
133.7
|
1.0
|
O
|
D:VAL445
|
2.9
|
133.7
|
1.0
|
O
|
B:VAL445
|
2.9
|
133.7
|
1.0
|
O
|
F:VAL445
|
2.9
|
133.7
|
1.0
|
O
|
B:THR444
|
3.4
|
130.2
|
1.0
|
O
|
D:THR444
|
3.4
|
130.2
|
1.0
|
O
|
H:THR444
|
3.4
|
130.2
|
1.0
|
O
|
F:THR444
|
3.4
|
130.2
|
1.0
|
C
|
H:VAL445
|
3.7
|
133.7
|
1.0
|
C
|
D:VAL445
|
3.7
|
133.7
|
1.0
|
C
|
B:VAL445
|
3.7
|
133.7
|
1.0
|
C
|
F:VAL445
|
3.7
|
133.7
|
1.0
|
K
|
B:K503
|
4.0
|
20.0
|
1.0
|
CA
|
D:VAL445
|
4.3
|
133.7
|
1.0
|
CA
|
H:VAL445
|
4.3
|
133.7
|
1.0
|
CA
|
B:VAL445
|
4.4
|
133.7
|
1.0
|
C
|
B:THR444
|
4.4
|
130.2
|
1.0
|
C
|
D:THR444
|
4.4
|
130.2
|
1.0
|
CA
|
F:VAL445
|
4.4
|
133.7
|
1.0
|
C
|
H:THR444
|
4.4
|
130.2
|
1.0
|
C
|
F:THR444
|
4.4
|
130.2
|
1.0
|
N
|
B:GLY446
|
4.5
|
139.8
|
1.0
|
N
|
H:GLY446
|
4.5
|
139.8
|
1.0
|
N
|
F:GLY446
|
4.5
|
139.8
|
1.0
|
N
|
D:GLY446
|
4.5
|
139.8
|
1.0
|
CA
|
F:GLY446
|
4.6
|
139.8
|
1.0
|
CA
|
B:GLY446
|
4.6
|
139.8
|
1.0
|
CA
|
H:GLY446
|
4.6
|
139.8
|
1.0
|
CA
|
D:GLY446
|
4.7
|
139.8
|
1.0
|
N
|
D:VAL445
|
4.9
|
133.7
|
1.0
|
N
|
B:VAL445
|
4.9
|
133.7
|
1.0
|
N
|
H:VAL445
|
4.9
|
133.7
|
1.0
|
N
|
F:VAL445
|
4.9
|
133.7
|
1.0
|
|
Potassium binding site 3 out
of 4 in 7wf3
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Potassium Binding Sites List in 7wf3
Potassium binding site 3 out
of 4 in the Composite Map of Human KV1.3 Channel in Apo State with Beta Subunits
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 3 of Composite Map of Human KV1.3 Channel in Apo State with Beta Subunits within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:K503
b:20.0
occ:1.00
|
O
|
F:THR444
|
3.1
|
130.2
|
1.0
|
O
|
H:THR444
|
3.1
|
130.2
|
1.0
|
O
|
B:THR444
|
3.1
|
130.2
|
1.0
|
O
|
D:THR444
|
3.2
|
130.2
|
1.0
|
OG1
|
B:THR444
|
3.5
|
30.0
|
1.0
|
OG1
|
F:THR444
|
3.5
|
30.0
|
1.0
|
K
|
B:K504
|
3.6
|
30.0
|
1.0
|
OG1
|
H:THR444
|
3.6
|
30.0
|
1.0
|
OG1
|
D:THR444
|
3.6
|
30.0
|
1.0
|
CB
|
B:THR444
|
3.8
|
30.0
|
1.0
|
CB
|
F:THR444
|
3.9
|
30.0
|
1.0
|
CB
|
H:THR444
|
3.9
|
30.0
|
1.0
|
CB
|
D:THR444
|
3.9
|
30.0
|
1.0
|
K
|
B:K502
|
4.0
|
20.0
|
1.0
|
C
|
B:THR444
|
4.2
|
130.2
|
1.0
|
C
|
H:THR444
|
4.2
|
130.2
|
1.0
|
C
|
F:THR444
|
4.2
|
130.2
|
1.0
|
C
|
D:THR444
|
4.2
|
130.2
|
1.0
|
CA
|
B:THR444
|
4.7
|
130.2
|
1.0
|
CA
|
F:THR444
|
4.7
|
130.2
|
1.0
|
CA
|
H:THR444
|
4.7
|
130.2
|
1.0
|
CA
|
D:THR444
|
4.8
|
130.2
|
1.0
|
|
Potassium binding site 4 out
of 4 in 7wf3
Go back to
Potassium Binding Sites List in 7wf3
Potassium binding site 4 out
of 4 in the Composite Map of Human KV1.3 Channel in Apo State with Beta Subunits
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 4 of Composite Map of Human KV1.3 Channel in Apo State with Beta Subunits within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:K504
b:30.0
occ:1.00
|
K
|
B:K503
|
3.6
|
20.0
|
1.0
|
OG1
|
F:THR444
|
4.1
|
30.0
|
1.0
|
OG1
|
H:THR444
|
4.2
|
30.0
|
1.0
|
OG1
|
B:THR444
|
4.2
|
30.0
|
1.0
|
OG1
|
D:THR444
|
4.3
|
30.0
|
1.0
|
|
Reference:
A.Tyagi,
T.Ahmed,
S.Jian,
S.Bajaj,
S.T.Ong,
S.S.M.Goay,
Y.Zhao,
I.Vorobyov,
C.Tian,
K.G.Chandy,
S.Bhushan.
Rearrangement of A Unique KV1.3 Selectivity Filter Conformation Upon Binding of A Drug. Proc.Natl.Acad.Sci.Usa V. 119 2022.
ISSN: ESSN 1091-6490
PubMed: 35091471
DOI: 10.1073/PNAS.2113536119
Page generated: Mon Aug 12 21:30:31 2024
|