Potassium in PDB 7vnr: Structure of Human KCNQ4-ML213 Complex in Digitonin
Potassium Binding Sites:
The binding sites of Potassium atom in the Structure of Human KCNQ4-ML213 Complex in Digitonin
(pdb code 7vnr). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 3 binding sites of Potassium where determined in the
Structure of Human KCNQ4-ML213 Complex in Digitonin, PDB code: 7vnr:
Jump to Potassium binding site number:
1;
2;
3;
Potassium binding site 1 out
of 3 in 7vnr
Go back to
Potassium Binding Sites List in 7vnr
Potassium binding site 1 out
of 3 in the Structure of Human KCNQ4-ML213 Complex in Digitonin
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of Structure of Human KCNQ4-ML213 Complex in Digitonin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K1102
b:77.1
occ:1.00
|
O
|
A:THR283
|
2.8
|
93.2
|
1.0
|
O
|
E:THR283
|
2.8
|
93.2
|
1.0
|
O
|
C:THR283
|
2.8
|
93.2
|
1.0
|
O
|
G:THR283
|
2.8
|
93.2
|
1.0
|
K
|
A:K1103
|
3.2
|
50.3
|
1.0
|
OG1
|
E:THR283
|
3.5
|
93.2
|
1.0
|
OG1
|
A:THR283
|
3.5
|
93.2
|
1.0
|
OG1
|
G:THR283
|
3.5
|
93.2
|
1.0
|
OG1
|
C:THR283
|
3.6
|
93.2
|
1.0
|
CB
|
E:THR283
|
3.7
|
93.2
|
1.0
|
CB
|
A:THR283
|
3.7
|
93.2
|
1.0
|
CB
|
G:THR283
|
3.7
|
93.2
|
1.0
|
CB
|
C:THR283
|
3.7
|
93.2
|
1.0
|
C
|
E:THR283
|
3.9
|
93.2
|
1.0
|
C
|
A:THR283
|
3.9
|
93.2
|
1.0
|
C
|
G:THR283
|
3.9
|
93.2
|
1.0
|
C
|
C:THR283
|
3.9
|
93.2
|
1.0
|
CA
|
E:THR283
|
4.5
|
93.2
|
1.0
|
CA
|
A:THR283
|
4.5
|
93.2
|
1.0
|
CA
|
G:THR283
|
4.5
|
93.2
|
1.0
|
CA
|
C:THR283
|
4.5
|
93.2
|
1.0
|
CG2
|
E:THR283
|
4.9
|
93.2
|
1.0
|
CG2
|
G:THR283
|
4.9
|
93.2
|
1.0
|
CG2
|
A:THR283
|
4.9
|
93.2
|
1.0
|
N
|
A:ILE284
|
4.9
|
42.9
|
1.0
|
N
|
E:ILE284
|
4.9
|
30.2
|
1.0
|
CG2
|
C:THR283
|
4.9
|
93.2
|
1.0
|
N
|
C:ILE284
|
4.9
|
40.8
|
1.0
|
N
|
G:ILE284
|
4.9
|
38.7
|
1.0
|
|
Potassium binding site 2 out
of 3 in 7vnr
Go back to
Potassium Binding Sites List in 7vnr
Potassium binding site 2 out
of 3 in the Structure of Human KCNQ4-ML213 Complex in Digitonin
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of Structure of Human KCNQ4-ML213 Complex in Digitonin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K1103
b:50.3
occ:1.00
|
O
|
A:ILE284
|
2.8
|
42.9
|
1.0
|
O
|
E:ILE284
|
2.8
|
30.2
|
1.0
|
O
|
C:ILE284
|
2.8
|
40.8
|
1.0
|
O
|
G:ILE284
|
2.8
|
38.7
|
1.0
|
O
|
A:THR283
|
3.0
|
93.2
|
1.0
|
O
|
E:THR283
|
3.0
|
93.2
|
1.0
|
O
|
G:THR283
|
3.0
|
93.2
|
1.0
|
O
|
C:THR283
|
3.0
|
93.2
|
1.0
|
K
|
A:K1102
|
3.2
|
77.1
|
1.0
|
C
|
A:ILE284
|
3.7
|
42.9
|
1.0
|
C
|
E:ILE284
|
3.7
|
30.2
|
1.0
|
C
|
C:ILE284
|
3.7
|
40.8
|
1.0
|
C
|
G:ILE284
|
3.7
|
38.7
|
1.0
|
C
|
A:THR283
|
4.1
|
93.2
|
1.0
|
C
|
E:THR283
|
4.1
|
93.2
|
1.0
|
C
|
G:THR283
|
4.1
|
93.2
|
1.0
|
C
|
C:THR283
|
4.1
|
93.2
|
1.0
|
CA
|
A:ILE284
|
4.1
|
42.9
|
1.0
|
CA
|
E:ILE284
|
4.1
|
30.2
|
1.0
|
CA
|
C:ILE284
|
4.1
|
40.8
|
1.0
|
CA
|
G:ILE284
|
4.2
|
38.7
|
1.0
|
N
|
A:ILE284
|
4.6
|
42.9
|
1.0
|
N
|
E:ILE284
|
4.6
|
30.2
|
1.0
|
N
|
C:ILE284
|
4.6
|
40.8
|
1.0
|
N
|
G:ILE284
|
4.6
|
38.7
|
1.0
|
N
|
A:GLY285
|
4.7
|
35.1
|
1.0
|
N
|
E:GLY285
|
4.7
|
37.0
|
1.0
|
N
|
C:GLY285
|
4.7
|
37.6
|
1.0
|
N
|
G:GLY285
|
4.7
|
36.3
|
1.0
|
O
|
A:GLY285
|
4.8
|
35.1
|
1.0
|
O
|
E:GLY285
|
4.8
|
37.0
|
1.0
|
O
|
C:GLY285
|
4.8
|
37.6
|
1.0
|
O
|
G:GLY285
|
4.8
|
36.3
|
1.0
|
CA
|
A:GLY285
|
5.0
|
35.1
|
1.0
|
|
Potassium binding site 3 out
of 3 in 7vnr
Go back to
Potassium Binding Sites List in 7vnr
Potassium binding site 3 out
of 3 in the Structure of Human KCNQ4-ML213 Complex in Digitonin
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 3 of Structure of Human KCNQ4-ML213 Complex in Digitonin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K1104
b:72.2
occ:1.00
|
O
|
E:GLY285
|
2.7
|
37.0
|
1.0
|
O
|
C:GLY285
|
2.7
|
37.6
|
1.0
|
O
|
A:GLY285
|
2.7
|
35.1
|
1.0
|
O
|
G:GLY285
|
2.8
|
36.3
|
1.0
|
O
|
A:TYR286
|
3.1
|
20.9
|
1.0
|
O
|
E:TYR286
|
3.1
|
43.2
|
1.0
|
O
|
C:TYR286
|
3.1
|
37.2
|
1.0
|
O
|
G:TYR286
|
3.1
|
34.2
|
1.0
|
C
|
A:TYR286
|
3.7
|
20.9
|
1.0
|
C
|
E:TYR286
|
3.7
|
43.2
|
1.0
|
C
|
C:TYR286
|
3.7
|
37.2
|
1.0
|
C
|
G:TYR286
|
3.8
|
34.2
|
1.0
|
C
|
E:GLY285
|
3.9
|
37.0
|
1.0
|
C
|
A:GLY285
|
3.9
|
35.1
|
1.0
|
C
|
C:GLY285
|
3.9
|
37.6
|
1.0
|
C
|
G:GLY285
|
3.9
|
36.3
|
1.0
|
CA
|
A:TYR286
|
4.1
|
20.9
|
1.0
|
CA
|
C:TYR286
|
4.2
|
37.2
|
1.0
|
CA
|
E:TYR286
|
4.2
|
43.2
|
1.0
|
CA
|
G:TYR286
|
4.2
|
34.2
|
1.0
|
N
|
A:TYR286
|
4.5
|
20.9
|
1.0
|
N
|
C:TYR286
|
4.5
|
37.2
|
1.0
|
N
|
E:TYR286
|
4.5
|
43.2
|
1.0
|
N
|
G:TYR286
|
4.6
|
34.2
|
1.0
|
N
|
E:GLY287
|
4.6
|
43.6
|
1.0
|
N
|
A:GLY287
|
4.6
|
43.9
|
1.0
|
N
|
C:GLY287
|
4.6
|
42.5
|
1.0
|
N
|
G:GLY287
|
4.6
|
43.1
|
1.0
|
O
|
C:ILE284
|
4.8
|
40.8
|
1.0
|
O
|
A:ILE284
|
4.8
|
42.9
|
1.0
|
O
|
E:ILE284
|
4.8
|
30.2
|
1.0
|
O
|
G:ILE284
|
4.8
|
38.7
|
1.0
|
|
Reference:
Y.Zheng,
H.Liu,
Y.Chen,
S.Dong,
F.Wang,
S.Wang,
G.L.Li,
Y.Shu,
F.Xu.
Structural Insights Into the Lipid and Ligand Regulation of A Human Neuronal Kcnq Channel. Neuron 2021.
ISSN: ISSN 0896-6273
PubMed: 34767770
DOI: 10.1016/J.NEURON.2021.10.029
Page generated: Mon Aug 12 21:28:15 2024
|