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Potassium in PDB 7svf: Bile Salt Hydrolase A From Lactobacillus Gasseri with Taurine Bound

Enzymatic activity of Bile Salt Hydrolase A From Lactobacillus Gasseri with Taurine Bound

All present enzymatic activity of Bile Salt Hydrolase A From Lactobacillus Gasseri with Taurine Bound:
3.5.1.24;

Protein crystallography data

The structure of Bile Salt Hydrolase A From Lactobacillus Gasseri with Taurine Bound, PDB code: 7svf was solved by M.E.Walker, M.R.Redinbo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.00 / 2.05
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 59.323, 153.548, 94.098, 90, 105.81, 90
R / Rfree (%) 16.1 / 19.6

Potassium Binding Sites:

The binding sites of Potassium atom in the Bile Salt Hydrolase A From Lactobacillus Gasseri with Taurine Bound (pdb code 7svf). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Bile Salt Hydrolase A From Lactobacillus Gasseri with Taurine Bound, PDB code: 7svf:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 7svf

Go back to Potassium Binding Sites List in 7svf
Potassium binding site 1 out of 2 in the Bile Salt Hydrolase A From Lactobacillus Gasseri with Taurine Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Bile Salt Hydrolase A From Lactobacillus Gasseri with Taurine Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K402

b:37.2
occ:1.00
O B:LEU44 2.5 34.8 1.0
O B:TYR41 2.6 34.5 1.0
OD1 B:ASN46 2.7 35.0 1.0
CG B:ASN46 3.5 32.5 1.0
C B:LEU44 3.7 32.9 1.0
C B:TYR41 3.8 35.9 1.0
N B:ASN46 3.8 34.0 1.0
ND2 B:ASN46 4.1 31.6 1.0
N B:TYR41 4.3 32.2 1.0
C B:ASP45 4.4 34.5 1.0
CA B:ASP45 4.4 33.9 1.0
O B:LYS42 4.4 35.0 1.0
N B:LEU44 4.5 31.5 1.0
CA B:TYR41 4.5 33.9 1.0
C B:LYS42 4.5 35.3 1.0
N B:ASP45 4.5 35.3 1.0
CB B:ASN46 4.6 31.2 1.0
CA B:ASN46 4.6 33.5 1.0
CB B:TYR41 4.7 29.9 1.0
N B:LYS42 4.7 30.5 1.0
CA B:LEU44 4.8 32.1 1.0
CA B:LYS42 4.9 33.4 1.0
N B:PHE43 4.9 32.1 1.0

Potassium binding site 2 out of 2 in 7svf

Go back to Potassium Binding Sites List in 7svf
Potassium binding site 2 out of 2 in the Bile Salt Hydrolase A From Lactobacillus Gasseri with Taurine Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Bile Salt Hydrolase A From Lactobacillus Gasseri with Taurine Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
D:K402

b:32.0
occ:1.00
O D:TYR41 2.6 24.5 1.0
O D:LEU44 2.6 25.0 1.0
OD1 D:ASN46 2.8 27.5 1.0
O D:HOH691 3.3 35.0 1.0
CG D:ASN46 3.5 27.5 1.0
C D:TYR41 3.8 26.3 1.0
C D:LEU44 3.8 24.6 1.0
ND2 D:ASN46 3.9 26.2 1.0
N D:ASN46 3.9 25.3 1.0
N D:TYR41 4.3 20.5 1.0
C D:ASP45 4.3 29.6 1.0
CA D:ASP45 4.4 25.9 1.0
O D:LYS42 4.4 25.3 1.0
CA D:TYR41 4.5 23.5 1.0
C D:LYS42 4.5 25.2 1.0
N D:LEU44 4.5 26.4 1.0
CB D:ASN46 4.6 19.9 1.0
N D:ASP45 4.6 24.5 1.0
CA D:ASN46 4.6 24.0 1.0
CB D:TYR41 4.7 20.3 1.0
N D:LYS42 4.8 22.4 1.0
CA D:LEU44 4.9 24.6 1.0
N D:PHE43 4.9 23.7 1.0
CA D:LYS42 4.9 24.5 1.0

Reference:

M.E.Walker, M.R.Redinbo. Structural Diversity of Bile Salt Hydrolases From Lactobacillus Reveals Rationale For Substrate Selectivity To Be Published.
Page generated: Mon Aug 12 21:13:00 2024

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