Potassium in PDB 7rjt: Aplysia SLO1 with Barium

Other elements in 7rjt:

The structure of Aplysia SLO1 with Barium also contains other interesting chemical elements:

Barium (Ba) 9 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Aplysia SLO1 with Barium (pdb code 7rjt). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 3 binding sites of Potassium where determined in the Aplysia SLO1 with Barium, PDB code: 7rjt:
Jump to Potassium binding site number: 1; 2; 3;

Potassium binding site 1 out of 3 in 7rjt

Go back to Potassium Binding Sites List in 7rjt
Potassium binding site 1 out of 3 in the Aplysia SLO1 with Barium


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Aplysia SLO1 with Barium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1107

b:138.9
occ:1.00
 O B:GLY278 3.0 153.8 1.0
O C:GLY278 3.0 153.9 1.0
O D:GLY278 3.0 153.3 1.0
O A:GLY278 3.0 153.3 1.0
O C:VAL277 3.1 154.7 1.0
O D:VAL277 3.1 154.5 1.0
O B:VAL277 3.1 155.0 1.0
O A:VAL277 3.1 154.7 1.0
C B:GLY278 3.8 153.8 1.0
C C:GLY278 3.8 153.9 1.0
C D:GLY278 3.8 153.3 1.0
C A:GLY278 3.8 153.3 1.0
BA A:BA1108 3.9 153.4 1.0
CA C:GLY278 4.0 153.9 1.0
CA D:GLY278 4.0 153.3 1.0
CA B:GLY278 4.0 153.8 1.0
CA A:GLY278 4.0 153.3 1.0
C B:VAL277 4.2 155.0 1.0
C C:VAL277 4.2 154.7 1.0
C D:VAL277 4.2 154.5 1.0
C A:VAL277 4.2 154.7 1.0
N B:GLY278 4.6 153.8 1.0
N C:GLY278 4.6 153.9 1.0
N D:GLY278 4.6 153.3 1.0
N A:GLY278 4.6 153.3 1.0
N D:PHE279 4.9 156.1 1.0
N A:PHE279 4.9 156.1 1.0
N B:PHE279 4.9 156.6 1.0
N C:PHE279 4.9 156.7 1.0

Potassium binding site 2 out of 3 in 7rjt

Go back to Potassium Binding Sites List in 7rjt
Potassium binding site 2 out of 3 in the Aplysia SLO1 with Barium


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Aplysia SLO1 with Barium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1109

b:142.3
occ:1.00
 O B:THR276 2.8 156.0 1.0
O C:THR276 2.8 155.7 1.0
O D:THR276 2.8 155.4 1.0
O A:THR276 2.8 155.7 1.0
BA A:BA1108 3.2 153.4 1.0
C B:THR276 3.9 156.0 1.0
C C:THR276 3.9 155.7 1.0
C D:THR276 3.9 155.4 1.0
C A:THR276 3.9 155.7 1.0
CB D:THR276 3.9 155.4 1.0
CB A:THR276 3.9 155.7 1.0
CB B:THR276 3.9 156.0 1.0
CB C:THR276 3.9 155.7 1.0
K A:K1110 3.9 93.0 1.0
OG1 B:THR276 4.0 156.0 1.0
OG1 C:THR276 4.0 155.7 1.0
OG1 D:THR276 4.0 155.4 1.0
OG1 A:THR276 4.0 155.7 1.0
CA C:THR276 4.5 155.7 1.0
CA D:THR276 4.5 155.4 1.0
CA B:THR276 4.5 156.0 1.0
CA A:THR276 4.5 155.7 1.0
N D:VAL277 5.0 154.5 1.0
N A:VAL277 5.0 154.7 1.0
N B:VAL277 5.0 155.0 1.0
N C:VAL277 5.0 154.7 1.0

Potassium binding site 3 out of 3 in 7rjt

Go back to Potassium Binding Sites List in 7rjt
Potassium binding site 3 out of 3 in the Aplysia SLO1 with Barium


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Aplysia SLO1 with Barium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1110

b:93.0
occ:1.00
 K A:K1109 3.9 142.3 1.0
OG1 B:THR276 4.8 156.0 1.0
OG1 A:THR276 4.8 155.7 1.0
OG1 C:THR276 4.8 155.7 1.0
OG1 D:THR276 4.8 155.4 1.0
CB B:THR276 4.9 156.0 1.0
CB A:THR276 4.9 155.7 1.0
CB D:THR276 4.9 155.4 1.0
CB C:THR276 4.9 155.7 1.0

Reference:

J.Zhu, S.Srivastava, R.Cachau, M.Holmgren. Cryoem Structure of Aplysia SLO1 with 10 Mm BA2+ at 2.93 A To Be Published.
Page generated: Mon Aug 12 20:54:31 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy