Atomistry » Potassium » PDB 7r3b-7sgg » 7rjt
Atomistry »
  Potassium »
    PDB 7r3b-7sgg »
      7rjt »

Potassium in PDB 7rjt: Aplysia SLO1 with Barium

Other elements in 7rjt:

The structure of Aplysia SLO1 with Barium also contains other interesting chemical elements:

Barium (Ba) 9 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Aplysia SLO1 with Barium (pdb code 7rjt). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 3 binding sites of Potassium where determined in the Aplysia SLO1 with Barium, PDB code: 7rjt:
Jump to Potassium binding site number: 1; 2; 3;

Potassium binding site 1 out of 3 in 7rjt

Go back to Potassium Binding Sites List in 7rjt
Potassium binding site 1 out of 3 in the Aplysia SLO1 with Barium


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Aplysia SLO1 with Barium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1107

b:138.9
occ:1.00
O B:GLY278 3.0 153.8 1.0
O C:GLY278 3.0 153.9 1.0
O D:GLY278 3.0 153.3 1.0
O A:GLY278 3.0 153.3 1.0
O C:VAL277 3.1 154.7 1.0
O D:VAL277 3.1 154.5 1.0
O B:VAL277 3.1 155.0 1.0
O A:VAL277 3.1 154.7 1.0
C B:GLY278 3.8 153.8 1.0
C C:GLY278 3.8 153.9 1.0
C D:GLY278 3.8 153.3 1.0
C A:GLY278 3.8 153.3 1.0
BA A:BA1108 3.9 153.4 1.0
CA C:GLY278 4.0 153.9 1.0
CA D:GLY278 4.0 153.3 1.0
CA B:GLY278 4.0 153.8 1.0
CA A:GLY278 4.0 153.3 1.0
C B:VAL277 4.2 155.0 1.0
C C:VAL277 4.2 154.7 1.0
C D:VAL277 4.2 154.5 1.0
C A:VAL277 4.2 154.7 1.0
N B:GLY278 4.6 153.8 1.0
N C:GLY278 4.6 153.9 1.0
N D:GLY278 4.6 153.3 1.0
N A:GLY278 4.6 153.3 1.0
N D:PHE279 4.9 156.1 1.0
N A:PHE279 4.9 156.1 1.0
N B:PHE279 4.9 156.6 1.0
N C:PHE279 4.9 156.7 1.0

Potassium binding site 2 out of 3 in 7rjt

Go back to Potassium Binding Sites List in 7rjt
Potassium binding site 2 out of 3 in the Aplysia SLO1 with Barium


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Aplysia SLO1 with Barium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1109

b:142.3
occ:1.00
O B:THR276 2.8 156.0 1.0
O C:THR276 2.8 155.7 1.0
O D:THR276 2.8 155.4 1.0
O A:THR276 2.8 155.7 1.0
BA A:BA1108 3.2 153.4 1.0
C B:THR276 3.9 156.0 1.0
C C:THR276 3.9 155.7 1.0
C D:THR276 3.9 155.4 1.0
C A:THR276 3.9 155.7 1.0
CB D:THR276 3.9 155.4 1.0
CB A:THR276 3.9 155.7 1.0
CB B:THR276 3.9 156.0 1.0
CB C:THR276 3.9 155.7 1.0
K A:K1110 3.9 93.0 1.0
OG1 B:THR276 4.0 156.0 1.0
OG1 C:THR276 4.0 155.7 1.0
OG1 D:THR276 4.0 155.4 1.0
OG1 A:THR276 4.0 155.7 1.0
CA C:THR276 4.5 155.7 1.0
CA D:THR276 4.5 155.4 1.0
CA B:THR276 4.5 156.0 1.0
CA A:THR276 4.5 155.7 1.0
N D:VAL277 5.0 154.5 1.0
N A:VAL277 5.0 154.7 1.0
N B:VAL277 5.0 155.0 1.0
N C:VAL277 5.0 154.7 1.0

Potassium binding site 3 out of 3 in 7rjt

Go back to Potassium Binding Sites List in 7rjt
Potassium binding site 3 out of 3 in the Aplysia SLO1 with Barium


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Aplysia SLO1 with Barium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1110

b:93.0
occ:1.00
K A:K1109 3.9 142.3 1.0
OG1 B:THR276 4.8 156.0 1.0
OG1 A:THR276 4.8 155.7 1.0
OG1 C:THR276 4.8 155.7 1.0
OG1 D:THR276 4.8 155.4 1.0
CB B:THR276 4.9 156.0 1.0
CB A:THR276 4.9 155.7 1.0
CB D:THR276 4.9 155.4 1.0
CB C:THR276 4.9 155.7 1.0

Reference:

J.Zhu, S.Srivastava, R.Cachau, M.Holmgren. Cryoem Structure of Aplysia SLO1 with 10 Mm BA2+ at 2.93 A To Be Published.
Page generated: Mon Aug 12 20:54:31 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy