Potassium in PDB 7qk5: In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A)

Other elements in 7qk5:

The structure of In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) also contains other interesting chemical elements:

Chlorine (Cl) 18 atoms

Potassium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 18;

Binding sites:

The binding sites of Potassium atom in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) (pdb code 7qk5). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 18 binding sites of Potassium where determined in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A), PDB code: 7qk5:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Potassium binding site 1 out of 18 in 7qk5

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Potassium binding site 1 out of 18 in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A)


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Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1002

b:53.7
occ:1.00
CL A:CL1004 3.1 58.7 1.0
CL C:CL501 3.1 53.0 1.0
HG A:SER341 3.4 48.7 1.0
HD12 C:ILE354 3.4 37.7 1.0
HG11 A:VAL339 3.4 39.6 1.0
OG A:SER341 3.9 48.7 1.0
HD13 C:ILE354 3.9 37.7 1.0
HG13 A:VAL339 4.1 39.6 1.0
CD1 C:ILE354 4.1 37.7 1.0
HG C:SER352 4.1 38.5 1.0
CG1 A:VAL339 4.2 39.6 1.0
HG12 A:VAL339 4.3 39.6 1.0
HD12 A:ILE354 4.4 37.7 1.0
HD11 C:ILE354 4.4 37.7 1.0
HD12 A:LEU344 4.4 50.1 1.0
HG C:SER341 4.4 48.7 1.0
HD11 A:LEU344 4.5 50.1 1.0
HD13 A:LEU344 4.5 50.1 1.0
HZ A:PHE346 4.6 48.0 1.0
HG A:SER352 4.7 38.5 1.0
HG11 C:VAL339 4.7 39.6 1.0
CD1 A:LEU344 4.7 50.1 1.0
OG C:SER352 4.9 38.5 1.0

Potassium binding site 2 out of 18 in 7qk5

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Potassium binding site 2 out of 18 in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A)


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Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1003

b:35.8
occ:1.00
H A:GLY335 2.4 30.8 1.0
O C:GLY355 2.6 36.7 1.0
HD11 C:LEU357 2.9 34.8 1.0
CL C:CL502 2.9 39.1 1.0
CL A:CL1001 2.9 39.1 1.0
HA3 C:GLY334 3.1 30.4 1.0
HG21 A:VAL337 3.2 34.1 1.0
N A:GLY335 3.3 30.8 1.0
HA2 A:GLY334 3.3 30.4 1.0
HD12 C:LEU357 3.3 34.8 1.0
HA3 C:GLY355 3.5 36.7 1.0
CD1 C:LEU357 3.6 34.8 1.0
HA2 A:GLY355 3.6 36.7 1.0
C C:GLY355 3.6 36.7 1.0
HG22 A:VAL337 3.7 34.1 1.0
HA3 A:GLY335 3.7 30.8 1.0
CG2 A:VAL337 3.9 34.1 1.0
CA C:GLY355 3.9 36.7 1.0
HA2 C:GLY355 3.9 36.7 1.0
CA A:GLY335 4.0 30.8 1.0
HD13 C:LEU357 4.1 34.8 1.0
CA A:GLY334 4.1 30.4 1.0
CA C:GLY334 4.1 30.4 1.0
HG23 A:VAL337 4.1 34.1 1.0
C A:GLY334 4.2 30.4 1.0
HA2 C:GLY334 4.2 30.4 1.0
HA3 A:GLY334 4.3 30.4 1.0
C A:GLY335 4.4 30.8 1.0
CA A:GLY355 4.6 36.7 1.0
HA3 A:GLY355 4.7 36.7 1.0
N C:SER356 4.8 35.6 1.0
H C:GLY335 4.8 30.8 1.0
HG C:LEU357 4.8 34.8 1.0
H A:GLN336 4.8 31.9 1.0
HA C:SER356 4.8 35.6 1.0
CG C:LEU357 4.8 34.8 1.0
N A:GLN336 4.8 31.9 1.0
H C:GLY334 4.9 30.4 1.0
O A:GLY335 4.9 30.8 1.0
C C:GLY334 4.9 30.4 1.0
HA2 A:GLY335 5.0 30.8 1.0

Potassium binding site 3 out of 18 in 7qk5

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Potassium binding site 3 out of 18 in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A)


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Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1005

b:35.8
occ:1.00
H F:GLY335 2.3 30.8 1.0
O A:GLY355 2.6 36.7 1.0
CL A:CL1001 2.9 39.1 1.0
CL F:CL502 2.9 39.1 1.0
HG21 F:VAL337 3.0 34.1 1.0
HD11 A:LEU357 3.1 34.8 1.0
N F:GLY335 3.3 30.8 1.0
HA2 F:GLY355 3.3 36.7 1.0
HA2 F:GLY334 3.4 30.4 1.0
HA3 A:GLY334 3.4 30.4 1.0
HA3 A:GLY355 3.5 36.7 1.0
HD12 A:LEU357 3.5 34.8 1.0
HG22 F:VAL337 3.5 34.1 1.0
C A:GLY355 3.6 36.7 1.0
CG2 F:VAL337 3.6 34.1 1.0
CD1 A:LEU357 3.7 34.8 1.0
HA3 F:GLY335 3.8 30.8 1.0
CA A:GLY355 4.0 36.7 1.0
HG23 F:VAL337 4.0 34.1 1.0
CA F:GLY335 4.0 30.8 1.0
HA2 A:GLY355 4.1 36.7 1.0
HD13 A:LEU357 4.2 34.8 1.0
CA F:GLY334 4.2 30.4 1.0
C F:GLY335 4.2 30.8 1.0
C F:GLY334 4.2 30.4 1.0
HA3 F:GLY334 4.3 30.4 1.0
CA F:GLY355 4.4 36.7 1.0
CA A:GLY334 4.4 30.4 1.0
HA2 A:GLY334 4.5 30.4 1.0
HA3 F:GLY355 4.5 36.7 1.0
O F:GLY335 4.6 30.8 1.0
H A:GLY335 4.6 30.8 1.0
N F:GLN336 4.7 31.9 1.0
K F:K505 4.7 41.7 1.0
HA A:SER356 4.7 35.6 1.0
N A:SER356 4.8 35.6 1.0
H F:GLN336 4.8 31.9 1.0
O F:GLY355 5.0 36.7 1.0
C F:GLY355 5.0 36.7 1.0

Potassium binding site 4 out of 18 in 7qk5

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Potassium binding site 4 out of 18 in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A)


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Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) within 5.0Å range:
probe atom residue distance (Å) B Occ
K:K501

b:44.6
occ:1.00
CL K:CL502 2.8 49.6 1.0
CL D:CL501 2.9 49.6 1.0
HG K:SER341 3.2 48.7 1.0
HG11 K:VAL339 3.5 39.6 1.0
HD12 D:ILE354 3.6 37.7 1.0
HG D:SER352 3.9 38.5 1.0
OG K:SER341 3.9 48.7 1.0
HD13 D:ILE354 3.9 37.7 1.0
HD12 K:ILE354 4.2 37.7 1.0
CD1 D:ILE354 4.2 37.7 1.0
HG13 K:VAL339 4.2 39.6 1.0
CG1 K:VAL339 4.2 39.6 1.0
HZ K:PHE346 4.4 48.0 1.0
HG12 K:VAL339 4.4 39.6 1.0
HD13 K:LEU344 4.4 50.1 1.0
HD11 K:LEU344 4.5 50.1 1.0
HG K:SER352 4.5 38.5 1.0
HD12 K:LEU344 4.6 50.1 1.0
HD11 D:ILE354 4.6 37.7 1.0
HG D:SER341 4.7 48.7 1.0
CD1 K:LEU344 4.8 50.1 1.0
OG D:SER352 4.8 38.5 1.0
K G:K1002 4.8 52.7 1.0

Potassium binding site 5 out of 18 in 7qk5

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Potassium binding site 5 out of 18 in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) within 5.0Å range:
probe atom residue distance (Å) B Occ
K:K504

b:35.8
occ:1.00
H K:GLY335 1.6 30.8 1.0
N K:GLY335 2.5 30.8 1.0
CL K:CL503 2.6 39.1 1.0
CL D:CL502 2.7 39.1 1.0
O D:GLY355 2.8 36.7 1.0
HA3 K:GLY335 2.8 30.8 1.0
HA3 D:GLY334 2.9 30.4 1.0
HD11 D:LEU357 2.9 34.8 1.0
HG21 K:VAL337 3.1 34.1 1.0
CA K:GLY335 3.1 30.8 1.0
HA2 K:GLY334 3.2 30.4 1.0
C K:GLY334 3.6 30.4 1.0
HD12 D:LEU357 3.6 34.8 1.0
HG22 K:VAL337 3.7 34.1 1.0
C K:GLY335 3.7 30.8 1.0
CG2 K:VAL337 3.7 34.1 1.0
CD1 D:LEU357 3.7 34.8 1.0
HA3 D:GLY355 3.7 36.7 1.0
HA2 K:GLY355 3.8 36.7 1.0
CA K:GLY334 3.8 30.4 1.0
HG23 K:VAL337 3.8 34.1 1.0
C D:GLY355 3.8 36.7 1.0
CA D:GLY334 3.9 30.4 1.0
HA3 K:GLY334 4.0 30.4 1.0
O K:GLY335 4.0 30.8 1.0
HA2 K:GLY335 4.1 30.8 1.0
HD13 D:LEU357 4.1 34.8 1.0
CA D:GLY355 4.2 36.7 1.0
HA2 D:GLY334 4.2 30.4 1.0
HA2 D:GLY355 4.2 36.7 1.0
N K:GLN336 4.4 31.9 1.0
H K:GLN336 4.5 31.9 1.0
HA3 G:GLY335 4.5 30.8 1.0
C D:GLY334 4.6 30.4 1.0
H D:GLY335 4.6 30.8 1.0
O K:GLY334 4.7 30.4 1.0
H D:GLY334 4.7 30.4 1.0
O D:GLY335 4.7 30.8 1.0
CA K:GLY355 4.7 36.7 1.0
HA3 K:GLY355 4.8 36.7 1.0
N D:GLY334 4.8 30.4 1.0
N D:GLY335 4.9 30.8 1.0
K G:K1005 4.9 35.8 1.0
HA D:SER356 5.0 35.6 1.0

Potassium binding site 6 out of 18 in 7qk5

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Potassium binding site 6 out of 18 in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K501

b:41.7
occ:1.00
H B:GLY335 1.9 30.8 1.0
O E:GLY355 2.5 36.7 1.0
CL E:CL1000 2.6 35.8 1.0
N B:GLY335 2.9 30.8 1.0
HG23 B:VAL337 2.9 34.1 1.0
HD11 E:LEU357 3.0 34.8 1.0
CL B:CL502 3.0 35.8 1.0
HA3 B:GLY335 3.1 30.8 1.0
HA3 E:GLY334 3.2 30.4 1.0
HG21 B:VAL337 3.3 34.1 1.0
HA3 E:GLY355 3.4 36.7 1.0
HA2 B:GLY355 3.4 36.7 1.0
HA2 B:GLY334 3.4 30.4 1.0
CA B:GLY335 3.5 30.8 1.0
CG2 B:VAL337 3.5 34.1 1.0
C E:GLY355 3.5 36.7 1.0
HD12 E:LEU357 3.6 34.8 1.0
HG22 B:VAL337 3.6 34.1 1.0
CD1 E:LEU357 3.7 34.8 1.0
CA E:GLY355 3.9 36.7 1.0
C B:GLY334 3.9 30.4 1.0
HA2 E:GLY355 3.9 36.7 1.0
C B:GLY335 4.0 30.8 1.0
CA B:GLY334 4.1 30.4 1.0
HA3 B:GLY334 4.2 30.4 1.0
HD13 E:LEU357 4.2 34.8 1.0
CA E:GLY334 4.2 30.4 1.0
O B:GLY335 4.3 30.8 1.0
CA B:GLY355 4.4 36.7 1.0
HA2 E:GLY334 4.4 30.4 1.0
HA2 B:GLY335 4.5 30.8 1.0
HA3 B:GLY355 4.5 36.7 1.0
N B:GLN336 4.6 31.9 1.0
HA3 H:GLY335 4.7 30.8 1.0
H B:GLN336 4.7 31.9 1.0
N E:SER356 4.7 35.6 1.0
HA E:SER356 4.7 35.6 1.0
K E:K1001 4.8 35.8 1.0
H E:GLY335 4.8 30.8 1.0
C E:GLY334 4.9 30.4 1.0
O E:GLY335 4.9 30.8 1.0
CB B:VAL337 4.9 34.1 1.0
HG E:LEU357 5.0 34.8 1.0

Potassium binding site 7 out of 18 in 7qk5

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Potassium binding site 7 out of 18 in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A)


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Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 7 of In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K504

b:63.7
occ:1.00
CL B:CL503 2.8 58.7 1.0
HG B:SER341 3.0 48.7 1.0
CL B:CL505 3.1 68.7 1.0
HG13 B:VAL339 3.2 39.6 1.0
HD12 E:ILE354 3.5 37.7 1.0
OG B:SER341 3.7 48.7 1.0
HD13 E:ILE354 3.8 37.7 1.0
HG12 B:VAL339 4.0 39.6 1.0
CG1 B:VAL339 4.0 39.6 1.0
CD1 E:ILE354 4.1 37.7 1.0
HG E:SER352 4.1 38.5 1.0
HG11 B:VAL339 4.1 39.6 1.0
HD12 B:ILE354 4.1 37.7 1.0
HD11 E:ILE354 4.4 37.7 1.0
HD11 B:LEU344 4.4 50.1 1.0
HG E:SER341 4.5 48.7 1.0
HD13 B:LEU344 4.5 50.1 1.0
K H:K1003 4.5 53.7 1.0
HZ B:PHE346 4.6 48.0 1.0
HD12 B:LEU344 4.7 50.1 1.0
HG B:SER352 4.7 38.5 1.0
CD1 B:LEU344 4.8 50.1 1.0
HG11 E:VAL339 4.8 39.6 1.0
HD11 B:ILE354 4.9 37.7 1.0
CB B:SER341 4.9 48.7 1.0
HG22 B:VAL339 5.0 39.6 1.0

Potassium binding site 8 out of 18 in 7qk5

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Potassium binding site 8 out of 18 in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 8 of In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:K1001

b:35.8
occ:1.00
H E:GLY335 2.2 30.8 1.0
HG21 E:VAL337 2.8 34.1 1.0
CL E:CL1000 2.9 35.8 1.0
N E:GLY335 3.1 30.8 1.0
HG22 E:VAL337 3.2 34.1 1.0
HA2 E:GLY355 3.3 36.7 1.0
CG2 E:VAL337 3.3 34.1 1.0
HG23 E:VAL337 3.5 34.1 1.0
HA3 E:GLY335 3.5 30.8 1.0
HA2 E:GLY334 3.5 30.4 1.0
CA E:GLY335 3.7 30.8 1.0
C E:GLY334 4.1 30.4 1.0
C E:GLY335 4.1 30.8 1.0
CA E:GLY334 4.1 30.4 1.0
HA3 E:GLY334 4.2 30.4 1.0
CA E:GLY355 4.3 36.7 1.0
O E:GLY335 4.3 30.8 1.0
HA3 E:GLY355 4.4 36.7 1.0
N E:GLN336 4.7 31.9 1.0
HA2 E:GLY335 4.8 30.8 1.0
K B:K501 4.8 41.7 1.0
CB E:VAL337 4.8 34.1 1.0
HA3 B:GLY335 4.8 30.8 1.0
H E:GLN336 4.9 31.9 1.0
H E:GLY355 5.0 36.7 1.0

Potassium binding site 9 out of 18 in 7qk5

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Potassium binding site 9 out of 18 in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 9 of In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) within 5.0Å range:
probe atom residue distance (Å) B Occ
F:K503

b:63.7
occ:1.00
CL A:CL1004 3.1 58.7 1.0
CL F:CL501 3.2 58.7 1.0
HG11 F:VAL339 3.4 39.6 1.0
HG F:SER341 3.5 48.7 1.0
HD12 A:ILE354 3.6 37.7 1.0
HD13 A:ILE354 3.9 37.7 1.0
OG F:SER341 4.0 48.7 1.0
HD12 F:ILE354 4.0 37.7 1.0
HG A:SER352 4.1 38.5 1.0
CG1 F:VAL339 4.2 39.6 1.0
CD1 A:ILE354 4.2 37.7 1.0
HG13 F:VAL339 4.2 39.6 1.0
HG12 F:VAL339 4.4 39.6 1.0
HD13 F:LEU344 4.4 50.1 1.0
HG A:SER341 4.4 48.7 1.0
HG F:SER352 4.4 38.5 1.0
HD11 F:LEU344 4.5 50.1 1.0
HZ F:PHE346 4.5 48.0 1.0
HD12 F:LEU344 4.6 50.1 1.0
HD11 A:ILE354 4.6 37.7 1.0
CD1 F:LEU344 4.7 50.1 1.0
OG A:SER352 4.9 38.5 1.0
HD11 F:ILE354 5.0 37.7 1.0
CD1 F:ILE354 5.0 37.7 1.0

Potassium binding site 10 out of 18 in 7qk5

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Potassium binding site 10 out of 18 in the In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 10 of In Vitro Assembled 266/297 - 391 Tau Filaments with Kcl (10A) within 5.0Å range:
probe atom residue distance (Å) B Occ
F:K504

b:63.7
occ:1.00
CL F:CL501 3.1 58.7 1.0
HD12 F:ILE354 3.8 37.7 1.0
HD13 F:ILE354 3.9 37.7 1.0
HG F:SER352 4.3 38.5 1.0
CD1 F:ILE354 4.3 37.7 1.0
HG F:SER341 4.6 48.7 1.0
HD11 F:ILE354 4.7 37.7 1.0

Reference:

S.Lovestam, F.A.Koh, B.Van Knippenberg, A.Kotecha, A.G.Murzin, M.Goedert, S.H.W.Scheres. Assembly of Recombinant Tau Into Filaments Identical to Those of Alzheimer'S Disease and Chronic Traumatic Encephalopathy. Elife V. 11 2022.
ISSN: ESSN 2050-084X
PubMed: 35244536
DOI: 10.7554/ELIFE.76494
Page generated: Wed Apr 5 09:49:58 2023

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