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Potassium in PDB 7pv8: INLB392_T332E: T332E Variant of Listeria Monocytogenes Inlb (Internalin B) Residues 36-392

Protein crystallography data

The structure of INLB392_T332E: T332E Variant of Listeria Monocytogenes Inlb (Internalin B) Residues 36-392, PDB code: 7pv8 was solved by C.Geerds, H.H.Niemann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 16.15 / 2.05
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.58, 54.59, 226.72, 90, 90, 90
R / Rfree (%) 18.6 / 22.9

Potassium Binding Sites:

The binding sites of Potassium atom in the INLB392_T332E: T332E Variant of Listeria Monocytogenes Inlb (Internalin B) Residues 36-392 (pdb code 7pv8). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the INLB392_T332E: T332E Variant of Listeria Monocytogenes Inlb (Internalin B) Residues 36-392, PDB code: 7pv8:

Potassium binding site 1 out of 1 in 7pv8

Go back to Potassium Binding Sites List in 7pv8
Potassium binding site 1 out of 1 in the INLB392_T332E: T332E Variant of Listeria Monocytogenes Inlb (Internalin B) Residues 36-392


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of INLB392_T332E: T332E Variant of Listeria Monocytogenes Inlb (Internalin B) Residues 36-392 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K402

b:39.6
occ:0.62
O A:GLU293 2.5 37.3 1.0
OD2 A:ASP274 2.5 36.3 1.0
O A:HOH525 2.5 34.6 1.0
O A:HOH738 2.5 38.6 1.0
O A:HOH621 2.6 34.7 1.0
HA A:VAL294 3.1 37.4 1.0
HG1 A:THR291 3.4 49.4 1.0
CG A:ASP274 3.4 38.2 1.0
C A:GLU293 3.4 32.3 1.0
HG A:SER273 3.6 37.9 1.0
OD1 A:ASP274 3.6 38.5 1.0
HB3 A:GLU293 3.7 43.1 1.0
HB2 A:SER273 3.9 38.5 1.0
CA A:VAL294 3.9 31.3 1.0
HG12 A:VAL294 4.0 41.6 1.0
OG A:SER273 4.1 31.8 1.0
N A:VAL294 4.1 34.2 1.0
OG1 A:THR291 4.1 41.1 1.0
O A:HOH586 4.2 40.1 1.0
HG2 A:GLU293 4.3 42.6 1.0
O A:HOH746 4.4 44.5 1.0
CB A:GLU293 4.4 35.9 1.0
H A:GLU293 4.4 41.7 1.0
CA A:GLU293 4.5 35.4 1.0
CB A:SER273 4.5 32.1 1.0
HG21 A:THR291 4.5 45.6 1.0
OE2 A:GLU293 4.7 37.8 1.0
CG1 A:VAL294 4.7 34.7 1.0
CG A:GLU293 4.8 35.5 1.0
C A:VAL294 4.8 33.9 1.0
O A:HOH553 4.8 41.4 1.0
CB A:ASP274 4.8 39.4 1.0
H A:SER295 4.8 38.8 1.0
HG13 A:VAL294 4.8 41.6 1.0
HB3 A:SER273 4.8 38.5 1.0
O A:HOH534 4.9 49.9 1.0
N A:GLU293 4.9 34.8 1.0
HB2 A:ASP274 4.9 47.2 1.0
CB A:VAL294 4.9 31.6 1.0
H A:VAL294 5.0 41.1 1.0
HG23 A:THR291 5.0 45.6 1.0

Reference:

C.Geerds, W.M.Bleymuller, T.Meyer, C.Widmann, H.H.Niemann. A Recurring Packing Contact in Crystals of Inlb Pinpoints Functional Binding Sites in the Internalin Domain and the B Repeat. Acta Crystallogr D Struct V. 78 310 2022BIOL.
ISSN: ISSN 2059-7983
PubMed: 35234145
DOI: 10.1107/S2059798322000432
Page generated: Sat Aug 9 14:04:12 2025

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