Potassium in PDB 7ood: Mycoplasma Pneumoniae 50S Subunit of Ribosomes in Chloramphenicol- Treated Cells

The structure of Mycoplasma Pneumoniae 50S Subunit of Ribosomes in Chloramphenicol- Treated Cells also contains other interesting chemical elements:

Chlorine	(Cl)	2 atoms
Zinc	(Zn)	3 atoms
Magnesium	(Mg)	25 atoms

The binding sites of Potassium atom in the Mycoplasma Pneumoniae 50S Subunit of Ribosomes in Chloramphenicol- Treated Cells (pdb code 7ood). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Mycoplasma Pneumoniae 50S Subunit of Ribosomes in Chloramphenicol- Treated Cells, PDB code: 7ood:

Potassium binding site 1 out of 1 in the Mycoplasma Pneumoniae 50S Subunit of Ribosomes in Chloramphenicol- Treated Cells


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Mycoplasma Pneumoniae 50S Subunit of Ribosomes in Chloramphenicol- Treated Cells within 5.0Å range: probe atom residue distance (Å) B Occ 3:K3001 b:50.7 occ:1.00 O6 3:G2068 2.6 50.0 1.0 O6 3:G2455 2.8 49.9 1.0 O4' 3:C2509 3.1 50.2 1.0 O4 3:U2512 3.1 51.0 1.0 C5 3:U2512 3.5 51.0 1.0 N7 3:G2455 3.5 49.9 1.0 C6 3:G2068 3.5 50.0 1.0 C6 3:G2455 3.6 49.9 1.0 C4 3:U2512 3.7 51.0 1.0 C1' 3:C2509 3.8 50.2 1.0 C5 3:G2455 3.9 49.9 1.0 N1 3:C2509 4.0 50.2 1.0 C5 3:G2068 4.1 50.0 1.0 N7 3:G2068 4.1 50.0 1.0 C2 3:C2509 4.2 50.2 1.0 C4' 3:C2509 4.3 50.2 1.0 O2 3:C2509 4.3 50.2 1.0 N6 3:A2459 4.3 49.5 1.0 C5' 3:C2509 4.4 50.2 1.0 C2' 3:U2508 4.4 49.8 1.0 N1 3:G2068 4.5 50.0 1.0 C6 3:C2509 4.5 50.2 1.0 C8 3:G2455 4.7 49.9 1.0 C6 3:U2512 4.7 51.0 1.0 N1 3:G2455 4.9 49.9 1.0 O2' 3:U2508 4.9 49.8 1.0 N3 3:C2509 4.9 50.2 1.0

L.Xue, S.Lenz, M.Zimmermann-Kogadeeva, D.Tegunov, P.Cramer, P.Bork, J.Rappsilber, J.Mahamid. Visualizing Translation Dynamics at Atomic Detail Inside A Bacterial Cell. Nature V. 610 205 2022.
ISSN: ESSN 1476-4687
PubMed: 36171285
DOI: 10.1038/S41586-022-05255-2