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Potassium in PDB 7klb: X-Ray Counterpart to Neutron Structure of Reduced Human Mnsod

Enzymatic activity of X-Ray Counterpart to Neutron Structure of Reduced Human Mnsod

All present enzymatic activity of X-Ray Counterpart to Neutron Structure of Reduced Human Mnsod:
1.15.1.1;

Protein crystallography data

The structure of X-Ray Counterpart to Neutron Structure of Reduced Human Mnsod, PDB code: 7klb was solved by J.Azadmanesh, W.E.Lutz, L.Coates, K.L.Weiss, G.E.O.Borgstahl, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.46 / 2.16
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 81.127, 81.127, 242.156, 90, 90, 120
R / Rfree (%) 21.2 / 21.9

Other elements in 7klb:

The structure of X-Ray Counterpart to Neutron Structure of Reduced Human Mnsod also contains other interesting chemical elements:

Manganese (Mn) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the X-Ray Counterpart to Neutron Structure of Reduced Human Mnsod (pdb code 7klb). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the X-Ray Counterpart to Neutron Structure of Reduced Human Mnsod, PDB code: 7klb:

Potassium binding site 1 out of 1 in 7klb

Go back to Potassium Binding Sites List in 7klb
Potassium binding site 1 out of 1 in the X-Ray Counterpart to Neutron Structure of Reduced Human Mnsod


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of X-Ray Counterpart to Neutron Structure of Reduced Human Mnsod within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K202

b:60.4
occ:1.00
N A:LEU14 2.5 32.9 1.0
O A:TYR11 2.8 29.1 1.0
C A:GLY12 3.0 35.3 1.0
O A:ILE18 3.0 33.2 1.0
N A:GLU15 3.0 33.7 1.0
CA A:LEU14 3.1 31.6 1.0
N A:ALA13 3.2 33.3 1.0
CA A:GLY12 3.3 33.0 1.0
CB A:LEU14 3.3 32.8 1.0
C A:LEU14 3.3 34.8 1.0
O A:GLY12 3.4 32.9 1.0
C A:ALA13 3.6 36.2 1.0
C A:TYR11 3.6 30.6 1.0
CG A:GLU15 3.7 42.3 1.0
N A:GLY12 3.8 31.9 1.0
CG A:MET23 3.9 25.2 1.0
CA A:ALA13 3.9 34.7 1.0
CG A:LEU14 4.0 30.3 1.0
CA A:GLU15 4.1 35.4 1.0
C A:ILE18 4.2 33.6 1.0
O A:LEU14 4.3 32.7 1.0
CB A:GLU15 4.3 36.4 1.0
C A:ASN19 4.3 31.0 1.0
N A:ALA20 4.3 33.1 1.0
CA A:ALA20 4.5 32.7 1.0
O A:ASN19 4.5 31.3 1.0
O A:ALA13 4.6 30.7 1.0
O A:ASP10 4.7 33.2 1.0
CA A:ASN19 4.7 35.2 1.0
CB A:MET23 4.8 31.6 1.0
CD A:GLU15 4.8 41.8 1.0
CA A:TYR11 5.0 30.2 1.0
CB A:ALA13 5.0 33.2 1.0
CD1 A:LEU14 5.0 27.8 1.0
N A:ASN19 5.0 33.9 1.0

Reference:

J.Azadmanesh, W.E.Lutz, L.Coates, K.L.Weiss, G.E.O.Borgstahl. Direct Detection of Coupled Proton and Electron Transfers in Human Manganese Superoxide Dismutase. Nat Commun V. 12 2079 2021.
ISSN: ESSN 2041-1723
PubMed: 33824320
DOI: 10.1038/S41467-021-22290-1
Page generated: Mon Aug 12 19:16:13 2024

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