Potassium in PDB 7bil: Crystal Structure of Helicase PIF1 From Thermus Oshimai in Complex with Oligo Ggtttggtttggtt

Protein crystallography data

The structure of Crystal Structure of Helicase PIF1 From Thermus Oshimai in Complex with Oligo Ggtttggtttggtt, PDB code: 7bil was solved by Y.X.Dai, W.F.Chen, F.Y.Teng, N.N.Liu, X.M.Hou, S.X.Dou, S.Rety, X.G.Xi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.02 / 2.21
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 88.052, 103.438, 251.566, 90, 90, 90
R / Rfree (%) 17.9 / 22

Other elements in 7bil:

The structure of Crystal Structure of Helicase PIF1 From Thermus Oshimai in Complex with Oligo Ggtttggtttggtt also contains other interesting chemical elements:

Aluminium (Al) 2 atoms
Magnesium (Mg) 2 atoms
Fluorine (F) 8 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of Helicase PIF1 From Thermus Oshimai in Complex with Oligo Ggtttggtttggtt (pdb code 7bil). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Structure of Helicase PIF1 From Thermus Oshimai in Complex with Oligo Ggtttggtttggtt, PDB code: 7bil:

Potassium binding site 1 out of 1 in 7bil

Go back to Potassium Binding Sites List in 7bil
Potassium binding site 1 out of 1 in the Crystal Structure of Helicase PIF1 From Thermus Oshimai in Complex with Oligo Ggtttggtttggtt


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Helicase PIF1 From Thermus Oshimai in Complex with Oligo Ggtttggtttggtt within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1004

b:97.4
occ:1.00
NE A:ARG111 3.6 82.9 1.0
CE A:LYS109 3.7 83.9 1.0
NH2 A:ARG111 3.9 67.2 1.0
CZ A:ARG111 4.2 73.3 1.0
O A:TYR108 4.3 90.9 1.0
NZ A:LYS109 4.3 98.0 1.0
CD A:ARG111 4.5 61.7 1.0
N A:GLY110 4.6 58.0 1.0
CG A:ARG111 4.8 61.3 1.0
CG A:LYS109 4.8 72.9 1.0
CD A:LYS109 4.9 82.3 1.0

Reference:

Y.X.Dai, W.F.Chen, N.N.Liu, F.Y.Teng, H.L.Guo, X.M.Hou, S.X.Dou, S.Rety, X.G.Xi. Structural and Functional Studies of SF1B PIF1 From Thermus Oshimai Reveal Dimerization-Induced Helicase Inhibition. Nucleic Acids Res. 2021.
ISSN: ESSN 1362-4962
PubMed: 33784404
DOI: 10.1093/NAR/GKAB188
Page generated: Sat Apr 17 16:16:12 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy