Atomistry » Potassium » PDB 7akk-7byn » 7alq
Atomistry »
  Potassium »
    PDB 7akk-7byn »
      7alq »

Potassium in PDB 7alq: Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound

Enzymatic activity of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound

All present enzymatic activity of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound:
3.5.4.16;

Protein crystallography data

The structure of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound, PDB code: 7alq was solved by R.Ebenhoch, H.Nar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 182.47 / 2.21
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 106.104, 185.418, 184.231, 90, 97.94, 90
R / Rfree (%) 17.7 / 22.2

Other elements in 7alq:

The structure of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound also contains other interesting chemical elements:

Zinc (Zn) 20 atoms

Potassium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20;

Binding sites:

The binding sites of Potassium atom in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound (pdb code 7alq). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 20 binding sites of Potassium where determined in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound, PDB code: 7alq:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Potassium binding site 1 out of 20 in 7alq

Go back to Potassium Binding Sites List in 7alq
Potassium binding site 1 out of 20 in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
a:K301

b:76.3
occ:1.00
O a:GLN9 2.4 48.0 1.0
O a:VAL14 2.6 45.1 1.0
O a:ARG11 2.7 48.0 1.0
OG1 a:THR8 2.7 48.8 1.0
C a:GLN9 3.5 48.0 1.0
N a:GLN9 3.7 47.6 1.0
C a:VAL14 3.7 44.4 1.0
C a:ARG11 3.7 47.2 1.0
CB a:THR8 4.0 48.7 1.0
CG1 a:VAL14 4.0 45.9 1.0
O a:GLY15 4.0 41.8 1.0
O a:HOH427 4.0 50.9 1.0
CA a:GLN9 4.0 47.4 1.0
C a:GLY15 4.2 42.0 1.0
O a:ILE10 4.2 47.2 1.0
CG2 a:THR8 4.3 49.7 1.0
C a:ILE10 4.3 48.3 1.0
C a:THR8 4.3 47.5 1.0
N a:ARG11 4.3 47.9 1.0
O a:PRO16 4.4 43.6 1.0
CA a:GLY15 4.4 42.7 1.0
N a:GLY15 4.4 43.4 1.0
CB a:GLN9 4.5 47.7 1.0
CA a:ARG11 4.5 46.5 1.0
N a:MET12 4.6 47.1 1.0
N a:ILE10 4.6 48.5 1.0
CA a:THR8 4.6 47.3 1.0
CA a:VAL14 4.6 44.9 1.0
N a:VAL14 4.7 45.7 1.0
CA a:MET12 4.7 47.6 1.0
N a:PRO16 4.9 41.3 1.0
CA a:ILE10 4.9 49.3 1.0
CB a:ARG11 4.9 45.9 1.0
O a:HOH423 4.9 42.5 1.0
CB a:VAL14 5.0 45.2 1.0

Potassium binding site 2 out of 20 in 7alq

Go back to Potassium Binding Sites List in 7alq
Potassium binding site 2 out of 20 in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
b:K301

b:76.5
occ:1.00
O b:VAL14 2.4 54.4 1.0
OG1 b:THR8 2.7 53.7 1.0
O b:GLN9 2.7 51.8 1.0
O b:ARG11 2.9 49.2 1.0
N b:GLN9 3.6 51.4 1.0
C b:VAL14 3.6 53.7 1.0
C b:GLN9 3.6 51.8 1.0
CB b:THR8 3.9 52.4 1.0
C b:ARG11 3.9 49.8 1.0
O b:GLY15 4.0 55.5 1.0
CA b:GLN9 4.1 51.6 1.0
CG2 b:THR8 4.2 52.5 1.0
C b:GLY15 4.2 55.5 1.0
C b:THR8 4.3 51.6 1.0
O b:HOH419 4.3 42.8 1.0
O b:PRO16 4.3 55.5 1.0
CG1 b:VAL14 4.3 52.6 1.0
O b:ILE10 4.3 52.4 1.0
CA b:GLY15 4.3 54.5 1.0
CB b:GLN9 4.4 53.2 1.0
N b:GLY15 4.4 53.9 1.0
CA b:THR8 4.5 51.1 1.0
C b:ILE10 4.5 52.3 1.0
CA b:VAL14 4.6 52.1 1.0
N b:MET12 4.6 49.9 1.0
N b:VAL14 4.6 51.2 1.0
CA b:MET12 4.7 50.7 1.0
N b:ARG11 4.7 51.7 1.0
N b:ILE10 4.7 51.8 1.0
CA b:ARG11 4.8 50.8 1.0
N b:PRO16 4.9 55.5 1.0

Potassium binding site 3 out of 20 in 7alq

Go back to Potassium Binding Sites List in 7alq
Potassium binding site 3 out of 20 in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
c:K301

b:97.9
occ:1.00
OG1 c:THR8 2.3 51.0 1.0
O c:ARG11 2.6 51.8 1.0
O c:VAL14 2.8 49.9 1.0
O c:GLN9 2.8 53.1 1.0
C c:VAL14 3.5 50.7 1.0
CB c:THR8 3.5 51.3 1.0
CG2 c:THR8 3.6 51.1 1.0
N c:GLN9 3.6 52.0 1.0
CA c:GLY15 3.7 52.0 1.0
C c:ARG11 3.8 52.0 1.0
C c:GLN9 3.8 53.3 1.0
N c:GLY15 3.9 51.7 1.0
O c:PRO16 4.1 52.9 1.0
C c:GLY15 4.1 52.5 1.0
O c:HOH413 4.2 44.8 1.0
CA c:GLN9 4.2 52.9 1.0
C c:THR8 4.2 51.9 1.0
CA c:THR8 4.3 51.5 1.0
O c:GLY15 4.4 53.0 1.0
N c:MET12 4.5 52.1 1.0
N c:VAL14 4.6 50.2 1.0
CA c:MET12 4.6 52.6 1.0
CB c:GLN9 4.6 54.7 1.0
CA c:VAL14 4.6 49.9 1.0
CG1 c:VAL14 4.6 49.5 1.0
N c:PRO16 4.7 52.3 1.0
N c:ARG11 4.8 53.4 1.0
CA c:ARG11 4.8 51.9 1.0
C c:ILE10 4.8 54.2 1.0
CD c:PRO53 4.8 65.0 1.0
C c:MET12 4.9 52.5 1.0
O c:ILE10 4.9 54.2 1.0
O c:MET12 4.9 53.5 1.0
N c:ILE10 5.0 53.7 1.0

Potassium binding site 4 out of 20 in 7alq

Go back to Potassium Binding Sites List in 7alq
Potassium binding site 4 out of 20 in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
d:K301

b:75.7
occ:1.00
O d:VAL14 2.4 48.8 1.0
O d:ARG11 2.5 48.2 1.0
O d:GLN9 2.6 48.3 1.0
O d:HOH414 2.6 42.3 1.0
OG1 d:THR8 2.7 48.3 1.0
C d:VAL14 3.6 48.4 1.0
C d:ARG11 3.6 47.3 1.0
CG2 d:THR8 3.6 46.5 1.0
C d:GLN9 3.7 47.6 1.0
CB d:THR8 3.7 47.2 1.0
N d:GLN9 3.8 46.7 1.0
CG1 d:VAL14 4.1 48.6 1.0
O d:GLY15 4.2 48.8 1.0
CA d:GLN9 4.2 47.0 1.0
O d:PRO16 4.3 48.5 1.0
C d:GLY15 4.3 48.7 1.0
N d:MET12 4.3 46.9 1.0
C d:THR8 4.4 46.6 1.0
CA d:GLY15 4.4 48.8 1.0
O d:HOH420 4.4 53.7 1.0
N d:GLY15 4.4 48.5 1.0
CA d:MET12 4.4 46.6 1.0
C d:ILE10 4.4 46.9 1.0
O d:ILE10 4.4 46.2 1.0
N d:ARG11 4.5 46.8 1.0
CA d:THR8 4.5 46.3 1.0
CA d:ARG11 4.5 46.3 1.0
N d:VAL14 4.6 47.3 1.0
CA d:VAL14 4.6 47.7 1.0
CB d:GLN9 4.7 48.3 1.0
N d:ILE10 4.7 47.5 1.0
C d:MET12 4.8 46.3 1.0
O d:HOH426 4.8 53.0 1.0
N d:PRO16 5.0 48.6 1.0
O d:MET12 5.0 47.1 1.0
CB d:VAL14 5.0 48.4 1.0

Potassium binding site 5 out of 20 in 7alq

Go back to Potassium Binding Sites List in 7alq
Potassium binding site 5 out of 20 in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
e:K301

b:76.1
occ:1.00
O e:VAL14 2.5 46.4 1.0
O e:ARG11 2.7 50.6 1.0
O e:GLN9 2.8 50.1 1.0
OG1 e:THR8 2.9 48.6 1.0
C e:VAL14 3.5 47.0 1.0
C e:GLN9 3.7 49.8 1.0
N e:GLN9 3.8 49.0 1.0
C e:ARG11 3.8 50.1 1.0
O e:GLY15 3.8 49.9 1.0
CG1 e:VAL14 3.9 48.9 1.0
CB e:THR8 3.9 48.4 1.0
CG2 e:THR8 3.9 48.1 1.0
O e:HOH423 3.9 54.7 1.0
C e:GLY15 4.1 48.8 1.0
CA e:GLN9 4.2 49.1 1.0
O e:PRO16 4.3 48.1 1.0
CA e:GLY15 4.3 47.8 1.0
N e:GLY15 4.3 47.4 1.0
O e:ILE10 4.3 51.5 1.0
C e:THR8 4.4 49.0 1.0
C e:ILE10 4.5 51.4 1.0
CA e:VAL14 4.5 47.8 1.0
N e:ARG11 4.6 51.0 1.0
CB e:GLN9 4.6 49.8 1.0
CA e:ARG11 4.6 50.2 1.0
N e:MET12 4.6 49.3 1.0
N e:VAL14 4.6 48.3 1.0
CA e:THR8 4.6 48.6 1.0
CA e:MET12 4.8 49.3 1.0
N e:PRO16 4.8 48.1 1.0
N e:ILE10 4.8 50.4 1.0
CB e:VAL14 4.9 48.5 1.0
CB e:ARG11 5.0 50.9 1.0

Potassium binding site 6 out of 20 in 7alq

Go back to Potassium Binding Sites List in 7alq
Potassium binding site 6 out of 20 in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
f:K301

b:72.8
occ:1.00
O f:GLN9 2.5 38.5 1.0
O f:ARG11 2.5 40.0 1.0
O f:VAL14 2.5 39.5 1.0
OG1 f:THR8 2.6 36.5 1.0
C f:GLN9 3.5 38.2 1.0
N f:GLN9 3.6 35.6 1.0
C f:ARG11 3.6 39.4 1.0
O f:HOH407 3.6 45.6 1.0
C f:VAL14 3.7 39.4 1.0
CB f:THR8 3.7 35.5 1.0
CG2 f:THR8 3.9 35.1 1.0
CA f:GLN9 4.0 36.5 1.0
CG1 f:VAL14 4.1 41.5 1.0
C f:THR8 4.2 35.5 1.0
O f:GLY15 4.3 38.2 1.0
N f:MET12 4.3 38.6 1.0
O f:ILE10 4.3 40.8 1.0
C f:ILE10 4.3 40.8 1.0
CA f:MET12 4.3 38.4 1.0
CA f:THR8 4.4 34.7 1.0
N f:ARG11 4.4 40.5 1.0
C f:GLY15 4.4 37.6 1.0
O f:PRO16 4.4 37.5 1.0
CA f:ARG11 4.5 39.4 1.0
CA f:GLY15 4.5 38.0 1.0
N f:GLY15 4.5 38.5 1.0
CB f:GLN9 4.5 37.0 1.0
N f:VAL14 4.6 39.4 1.0
N f:ILE10 4.6 39.2 1.0
CA f:VAL14 4.6 39.8 1.0
C f:MET12 4.7 38.9 1.0
O f:MET12 4.9 39.6 1.0
CA f:ILE10 5.0 40.1 1.0

Potassium binding site 7 out of 20 in 7alq

Go back to Potassium Binding Sites List in 7alq
Potassium binding site 7 out of 20 in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 7 of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
g:K301

b:74.7
occ:1.00
OG1 g:THR8 2.5 42.0 1.0
O g:VAL14 2.5 42.8 1.0
O g:GLN9 2.7 43.4 1.0
O g:ARG11 2.7 44.5 1.0
N g:GLN9 3.6 40.3 1.0
C g:GLN9 3.6 42.9 1.0
C g:VAL14 3.6 42.5 1.0
CB g:THR8 3.7 40.5 1.0
C g:ARG11 3.8 44.1 1.0
CG2 g:THR8 4.0 40.2 1.0
CA g:GLN9 4.1 41.4 1.0
O g:GLY15 4.1 42.3 1.0
CG1 g:VAL14 4.1 44.2 1.0
C g:THR8 4.2 40.0 1.0
O g:PRO16 4.2 40.9 1.0
C g:GLY15 4.2 41.7 1.0
CA g:GLY15 4.3 41.6 1.0
CA g:THR8 4.4 39.6 1.0
N g:GLY15 4.4 41.8 1.0
O g:ILE10 4.4 46.1 1.0
CB g:GLN9 4.5 43.0 1.0
C g:ILE10 4.5 45.7 1.0
N g:MET12 4.6 43.4 1.0
CA g:VAL14 4.6 42.9 1.0
N g:ARG11 4.6 45.5 1.0
N g:VAL14 4.7 42.6 1.0
CA g:ARG11 4.7 44.4 1.0
CA g:MET12 4.7 43.7 1.0
N g:ILE10 4.7 43.7 1.0
N g:PRO16 4.9 41.0 1.0

Potassium binding site 8 out of 20 in 7alq

Go back to Potassium Binding Sites List in 7alq
Potassium binding site 8 out of 20 in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 8 of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
h:K301

b:76.2
occ:1.00
O h:VAL14 2.5 43.3 1.0
O h:ARG11 2.8 45.0 1.0
OG1 h:THR8 2.9 41.1 1.0
O h:GLN9 2.9 44.6 1.0
C h:VAL14 3.5 42.9 1.0
O h:GLY15 3.6 44.2 1.0
O h:HOH420 3.6 47.9 1.0
CG1 h:VAL14 3.8 42.6 1.0
N h:GLN9 3.8 42.9 1.0
C h:GLN9 3.8 44.5 1.0
C h:GLY15 3.9 43.9 1.0
C h:ARG11 3.9 44.6 1.0
CB h:THR8 4.1 41.3 1.0
CA h:GLY15 4.1 43.3 1.0
N h:GLY15 4.2 42.8 1.0
CA h:GLN9 4.2 43.8 1.0
O h:PRO16 4.3 43.1 1.0
O h:ILE10 4.3 46.0 1.0
CG2 h:THR8 4.4 41.1 1.0
CA h:VAL14 4.5 42.7 1.0
CB h:GLN9 4.5 45.7 1.0
C h:ILE10 4.5 46.3 1.0
C h:THR8 4.5 42.8 1.0
N h:PRO16 4.6 43.8 1.0
N h:VAL14 4.7 43.4 1.0
N h:ARG11 4.7 46.1 1.0
CA h:ARG11 4.7 45.1 1.0
CA h:THR8 4.7 41.8 1.0
CB h:VAL14 4.8 42.9 1.0
N h:MET12 4.8 43.8 1.0
N h:ILE10 4.9 45.2 1.0

Potassium binding site 9 out of 20 in 7alq

Go back to Potassium Binding Sites List in 7alq
Potassium binding site 9 out of 20 in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 9 of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
i:K301

b:72.4
occ:1.00
O i:VAL14 2.4 39.8 1.0
O i:ARG11 2.6 44.6 1.0
O i:GLN9 2.7 44.4 1.0
OG1 i:THR8 2.9 43.7 1.0
C i:VAL14 3.4 40.6 1.0
C i:ARG11 3.7 44.0 1.0
CG1 i:VAL14 3.7 42.4 1.0
C i:GLN9 3.8 44.2 1.0
N i:GLN9 3.8 42.8 1.0
O i:GLY15 3.8 42.6 1.0
C i:GLY15 4.1 42.2 1.0
CB i:THR8 4.1 42.6 1.0
N i:GLY15 4.2 41.1 1.0
CA i:GLY15 4.2 41.5 1.0
CG2 i:THR8 4.2 42.1 1.0
CA i:GLN9 4.3 43.6 1.0
O i:ILE10 4.3 45.4 1.0
O i:HOH430 4.3 50.0 1.0
O i:PRO16 4.4 43.3 1.0
CA i:VAL14 4.4 41.1 1.0
C i:ILE10 4.5 45.5 1.0
N i:VAL14 4.5 40.9 1.0
N i:ARG11 4.5 44.9 1.0
C i:THR8 4.5 42.5 1.0
CA i:ARG11 4.5 44.0 1.0
N i:MET12 4.6 43.1 1.0
CB i:GLN9 4.7 45.5 1.0
CB i:VAL14 4.7 42.2 1.0
CA i:MET12 4.7 42.8 1.0
CA i:THR8 4.7 42.5 1.0
N i:PRO16 4.8 42.3 1.0
N i:ILE10 4.8 44.6 1.0
CB i:ARG11 4.9 43.6 1.0
O i:HOH420 4.9 29.3 1.0

Potassium binding site 10 out of 20 in 7alq

Go back to Potassium Binding Sites List in 7alq
Potassium binding site 10 out of 20 in the Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 10 of Human Gch-Gfrp Inhibitory Complex 7-Deaza-Gtp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
j:K301

b:66.3
occ:1.00
O j:VAL14 2.4 40.8 1.0
OG1 j:THR8 2.5 39.1 1.0
O j:ARG11 2.8 39.9 1.0
O j:GLN9 2.8 40.8 1.0
C j:VAL14 3.4 39.9 1.0
CB j:THR8 3.7 37.8 1.0
N j:GLN9 3.7 37.3 1.0
O j:GLY15 3.8 39.5 1.0
CG2 j:THR8 3.8 38.0 1.0
C j:GLN9 3.8 40.3 1.0
C j:ARG11 3.9 39.6 1.0
CG1 j:VAL14 3.9 41.0 1.0
C j:GLY15 3.9 39.0 1.0
O j:PRO16 4.1 39.6 1.0
CA j:GLY15 4.1 38.7 1.0
N j:GLY15 4.2 39.0 1.0
CA j:GLN9 4.2 38.4 1.0
C j:THR8 4.3 36.8 1.0
CA j:THR8 4.4 36.5 1.0
CA j:VAL14 4.5 39.5 1.0
N j:VAL14 4.6 38.8 1.0
N j:PRO16 4.6 38.2 1.0
CB j:GLN9 4.6 39.1 1.0
O j:ILE10 4.7 40.4 1.0
N j:MET12 4.7 38.7 1.0
C j:ILE10 4.8 41.3 1.0
N j:ARG11 4.8 41.5 1.0
CA j:ARG11 4.8 40.1 1.0
CA j:MET12 4.8 38.8 1.0
CB j:VAL14 4.8 40.4 1.0
N j:ILE10 5.0 40.8 1.0

Reference:

R.Ebenhoch, M.Bauer, A.Kersting, S.Huber, A.Schmid, I.Hinz, M.Feiler, K.Mueller, H.Nar. Using Hybrid Approaches to Study the Allosteric Regulation of Gtp Cyclohydrolase I To Be Published.
Page generated: Sat Aug 9 12:56:41 2025

Last articles

Mg in 2HNY
Mg in 2HMF
Mg in 2HMC
Mg in 2HND
Mg in 2HMA
Mg in 2HJ6
Mg in 2HK6
Mg in 2HKJ
Mg in 2HIT
Mg in 2HJP
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy